RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 CFAP161Q6P656 301 aa9.84□□□□□ -0.83
HSPG2-201ENST00000374673 FAM19A2Q8N3H0 131 aa9.84□□□□□ -0.83
HSPG2-201ENST00000374673 C15orf56Q8N910 161 aa9.84□□□□□ -0.83
HSPG2-201ENST00000374673 HECTD4Q9Y4D8 3996 aa9.84□□□□□ -0.83
HSPG2-201ENST00000374673 EPPK1P58107 5090 aaKnown RBP9.84□□□□□ -0.83
HSPG2-201ENST00000374673 COX7A2LO14548 114 aa9.83□□□□□ -0.84
HSPG2-201ENST00000374673 NUPR1O60356 82 aa9.83□□□□□ -0.84
HSPG2-201ENST00000374673 PRSS1P07477 247 aa9.83□□□□□ -0.84
HSPG2-201ENST00000374673 PMVKQ15126 192 aa9.83□□□□□ -0.84
HSPG2-201ENST00000374673 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.82□□□□□ -0.84
HSPG2-201ENST00000374673 IGHV1-58A0A0C4DH39 117 aa9.82□□□□□ -0.84
HSPG2-201ENST00000374673 SEC11AP67812 179 aa9.82□□□□□ -0.84
HSPG2-201ENST00000374673 CST9LQ9H4G1 147 aa9.82□□□□□ -0.84
HSPG2-201ENST00000374673 IGLV5-52A0A0A0MRZ9 124 aa9.81□□□□□ -0.84
HSPG2-201ENST00000374673 COX6A2Q02221 97 aa9.81□□□□□ -0.84
HSPG2-201ENST00000374673 C5orf38Q86SI9 138 aa9.81□□□□□ -0.84
HSPG2-201ENST00000374673 GVQW2A0A096LPI5 108 aaPredicted RBP9.8□□□□□ -0.84
HSPG2-201ENST00000374673 hDV102S1A0JD36 115 aa9.8□□□□□ -0.84
HSPG2-201ENST00000374673 C16orf90A8MZG2 172 aa9.8□□□□□ -0.84
HSPG2-201ENST00000374673 MALP21145 153 aa9.8□□□□□ -0.84
HSPG2-201ENST00000374673 FUSP35637 526 aaKnown RBP eCLIP9.8□□□□□ -0.84
HSPG2-201ENST00000374673 HERVK_113P63121 156 aa9.8□□□□□ -0.84
HSPG2-201ENST00000374673 COA6Q5JTJ3 125 aaKnown RBP9.8□□□□□ -0.84
HSPG2-201ENST00000374673 IFI27L1Q96BM0 104 aa9.8□□□□□ -0.84
HSPG2-201ENST00000374673 A0A087WZ39 114 aa9.79□□□□□ -0.84
HSPG2-201ENST00000374673 A0A0J9YXV3 536 aa9.79□□□□□ -0.84
HSPG2-201ENST00000374673 TINCRA0A1B0GVN0 87 aa9.79□□□□□ -0.84
HSPG2-201ENST00000374673 LEPROTL1O95214 131 aa9.79□□□□□ -0.84
HSPG2-201ENST00000374673 APOMO95445 188 aa9.79□□□□□ -0.84
HSPG2-201ENST00000374673 HIGD2BQ4VC39 106 aa9.78□□□□□ -0.84
HSPG2-201ENST00000374673 LINC01561Q8N1V8 128 aa9.78□□□□□ -0.84
HSPG2-201ENST00000374673 GEMIN7Q9H840 131 aaKnown RBP9.78□□□□□ -0.84
HSPG2-201ENST00000374673 TRAV12-1A0A0B4J245 112 aa9.77□□□□□ -0.85
HSPG2-201ENST00000374673 NDUFA6P56556 154 aa9.77□□□□□ -0.85
HSPG2-201ENST00000374673 CNBPP62633 177 aaKnown RBP9.77□□□□□ -0.85
HSPG2-201ENST00000374673 DNAH5Q8TE73 4624 aa9.77□□□□□ -0.85
HSPG2-201ENST00000374673 IGHV3-64A0A075B6Q5 118 aa9.76□□□□□ -0.85
HSPG2-201ENST00000374673 IGLV5-45A0A087WSX0 123 aa9.76□□□□□ -0.85
HSPG2-201ENST00000374673 IGLC3P0DOY3 106 aa9.76□□□□□ -0.85
HSPG2-201ENST00000374673 GCSHP23434 173 aa9.76□□□□□ -0.85
HSPG2-201ENST00000374673 OR10D4PQ8NGN7 298 aa9.76□□□□□ -0.85
HSPG2-201ENST00000374673 CDKN2A-AS1Q9UH64 79 aa9.76□□□□□ -0.85
HSPG2-201ENST00000374673 HSPB8Q9UJY1 196 aa9.76□□□□□ -0.85
HSPG2-201ENST00000374673 IGLV4-69A0A075B6H9 119 aa9.75□□□□□ -0.85
HSPG2-201ENST00000374673 ZNF561-AS1K7EIQ3 104 aa9.75□□□□□ -0.85
HSPG2-201ENST00000374673 SLPIP03973 132 aa9.75□□□□□ -0.85
HSPG2-201ENST00000374673 ORAOV1Q8WV07 137 aa9.75□□□□□ -0.85
HSPG2-201ENST00000374673 PACRGQ96M98 296 aaPredicted RBP9.75□□□□□ -0.85
HSPG2-201ENST00000374673 DYNC1H1Q14204 4646 aaKnown RBP9.75□□□□□ -0.85
HSPG2-201ENST00000374673 PKHD1P08F94 4074 aa9.74□□□□□ -0.85
HSPG2-201ENST00000374673 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.74□□□□□ -0.85
HSPG2-201ENST00000374673 FABP4P15090 132 aa9.74□□□□□ -0.85
HSPG2-201ENST00000374673 LINC00469Q8N7U9 141 aa9.74□□□□□ -0.85
HSPG2-201ENST00000374673 C9orf163Q8N9P6 203 aa9.74□□□□□ -0.85
HSPG2-201ENST00000374673 CHAC1Q9BUX1 264 aa9.74□□□□□ -0.85
HSPG2-201ENST00000374673 CHTOPQ9Y3Y2 248 aaKnown RBP9.74□□□□□ -0.85
HSPG2-201ENST00000374673 SPAG11BQ08648 103 aa9.73□□□□□ -0.85
HSPG2-201ENST00000374673 LINC00526Q96FQ7 95 aa9.73□□□□□ -0.85
HSPG2-201ENST00000374673 C2orf48Q96LS8 159 aa9.73□□□□□ -0.85
HSPG2-201ENST00000374673 F8VRH5 84 aa9.72□□□□□ -0.85
HSPG2-201ENST00000374673 KRTAP10-1P60331 282 aa9.72□□□□□ -0.85
HSPG2-201ENST00000374673 BIRC6Q9NR09 4857 aa9.72□□□□□ -0.85
HSPG2-201ENST00000374673 F8WDY8 70 aa9.71□□□□□ -0.86
HSPG2-201ENST00000374673 ZNF22P17026 224 aaPredicted RBP9.71□□□□□ -0.86
HSPG2-201ENST00000374673 KIAA0087Q14695 138 aa9.71□□□□□ -0.86
HSPG2-201ENST00000374673 C11orf86A6NJI1 115 aa9.7□□□□□ -0.86
HSPG2-201ENST00000374673 SMIM1B2RUZ4 78 aa9.7□□□□□ -0.86
HSPG2-201ENST00000374673 H3BRM9 83 aa9.7□□□□□ -0.86
HSPG2-201ENST00000374673 SYCNQ0VAF6 134 aa9.7□□□□□ -0.86
HSPG2-201ENST00000374673 ODF1Q14990 250 aa9.7□□□□□ -0.86
HSPG2-201ENST00000374673 LINC01620Q4KN68 170 aa9.7□□□□□ -0.86
HSPG2-201ENST00000374673 CARD19Q96LW7 228 aa9.7□□□□□ -0.86
HSPG2-201ENST00000374673 MAP1LC3CQ9BXW4 147 aa9.7□□□□□ -0.86
HSPG2-201ENST00000374673 MRPL35Q9NZE8 188 aaKnown RBP9.7□□□□□ -0.86
HSPG2-201ENST00000374673 H0Y8G0 127 aa9.69□□□□□ -0.86
HSPG2-201ENST00000374673 Q8IZM0 81 aa9.69□□□□□ -0.86
HSPG2-201ENST00000374673 CAMK2N2Q96S95 79 aa9.69□□□□□ -0.86
HSPG2-201ENST00000374673 LRP1BQ9NZR2 4599 aa9.68□□□□□ -0.86
HSPG2-201ENST00000374673 Q6ZRU5 148 aa9.68□□□□□ -0.86
HSPG2-201ENST00000374673 NDUFA1O15239 70 aa9.67□□□□□ -0.86
HSPG2-201ENST00000374673 PRSS2P07478 247 aa9.67□□□□□ -0.86
HSPG2-201ENST00000374673 SPINK8P0C7L1 97 aa9.67□□□□□ -0.86
HSPG2-201ENST00000374673 TMEM170BQ5T4T1 132 aa9.67□□□□□ -0.86
HSPG2-201ENST00000374673 SDIM1Q6ZPB5 146 aa9.67□□□□□ -0.86
HSPG2-201ENST00000374673 TOMM7Q9P0U1 55 aa9.67□□□□□ -0.86
HSPG2-201ENST00000374673 S100A6P06703 90 aa9.66□□□□□ -0.86
HSPG2-201ENST00000374673 Q6ZSA8 131 aa9.66□□□□□ -0.86
HSPG2-201ENST00000374673 IGLV5-39A0A0G2JS06 123 aa9.65□□□□□ -0.86
HSPG2-201ENST00000374673 SYS1-DBNDD2H3BUS1 97 aa9.65□□□□□ -0.86
HSPG2-201ENST00000374673 CDK2AP2O75956 126 aa9.65□□□□□ -0.86
HSPG2-201ENST00000374673 RNF151Q2KHN1 245 aa9.65□□□□□ -0.86
HSPG2-201ENST00000374673 C6orf226Q5I0X4 101 aa9.65□□□□□ -0.86
HSPG2-201ENST00000374673 HIST3H2BBQ8N257 126 aa9.65□□□□□ -0.86
HSPG2-201ENST00000374673 PKIGQ9Y2B9 76 aa9.65□□□□□ -0.86
HSPG2-201ENST00000374673 TMEM223A0PJW6 202 aa9.64□□□□□ -0.87
HSPG2-201ENST00000374673 PLNP26678 52 aa9.64□□□□□ -0.87
HSPG2-201ENST00000374673 CXCL5P42830 114 aa9.64□□□□□ -0.87
HSPG2-201ENST00000374673 C10orf25Q5T742 122 aa9.64□□□□□ -0.87
HSPG2-201ENST00000374673 UNQ6190/PRO20217Q6UXQ8 127 aa9.64□□□□□ -0.87
HSPG2-201ENST00000374673 COX7B2Q8TF08 81 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms