RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 TRAV8-4A0A0B4J246 113 aa11.89□□□□□ -0.51
PCIF1-201ENST00000372409 IGKV3OR2-268A0A0C4DH90 116 aa11.89□□□□□ -0.51
PCIF1-201ENST00000372409 TMEM243Q9BU79 118 aa11.89□□□□□ -0.51
PCIF1-201ENST00000372409 LST1O00453 97 aa11.88□□□□□ -0.51
PCIF1-201ENST00000372409 TEX29Q8N6K0 151 aa11.88□□□□□ -0.51
PCIF1-201ENST00000372409 GIG44P09565 113 aaPredicted RBP11.88□□□□□ -0.51
PCIF1-201ENST00000372409 PLA2G2AP14555 144 aa11.88□□□□□ -0.51
PCIF1-201ENST00000372409 HELZ2Q9BYK8 2649 aaKnown RBP11.88□□□□□ -0.51
PCIF1-201ENST00000372409 SOSTDC1Q6X4U4 206 aa11.87□□□□□ -0.51
PCIF1-201ENST00000372409 LINC01006Q8NI28 216 aa11.87□□□□□ -0.51
PCIF1-201ENST00000372409 C16orf74Q96GX8 76 aa11.87□□□□□ -0.51
PCIF1-201ENST00000372409 H3BT86 120 aa11.87□□□□□ -0.51
PCIF1-201ENST00000372409 TRGV4A0A0C4DH28 118 aa11.86□□□□□ -0.51
PCIF1-201ENST00000372409 SNCGO76070 127 aa11.86□□□□□ -0.51
PCIF1-201ENST00000372409 F5H768 121 aa11.86□□□□□ -0.51
PCIF1-201ENST00000372409 FAM19A3Q7Z5A8 133 aa11.86□□□□□ -0.51
PCIF1-201ENST00000372409 NBEAL2Q6ZNJ1 2754 aa11.85□□□□□ -0.51
PCIF1-201ENST00000372409 PLAC8L1A1L4L8 177 aa11.85□□□□□ -0.51
PCIF1-201ENST00000372409 GAGE6Q13070 117 aa11.85□□□□□ -0.51
PCIF1-201ENST00000372409 LINC01600Q96MT4 127 aa11.84□□□□□ -0.51
PCIF1-201ENST00000372409 COPS9Q8WXC6 57 aa11.84□□□□□ -0.51
PCIF1-201ENST00000372409 TOMM7Q9P0U1 55 aa11.84□□□□□ -0.51
PCIF1-201ENST00000372409 CRLF1O75462 422 aa11.83□□□□□ -0.52
PCIF1-201ENST00000372409 CMC4P56277 68 aaPredicted RBP11.83□□□□□ -0.52
PCIF1-201ENST00000372409 HECTD1Q9ULT8 2610 aa11.82□□□□□ -0.52
PCIF1-201ENST00000372409 HERV-K104P63124 156 aa11.81□□□□□ -0.52
PCIF1-201ENST00000372409 CITED1Q99966 193 aa11.81□□□□□ -0.52
PCIF1-201ENST00000372409 PDZD2O15018 2839 aa11.81□□□□□ -0.52
PCIF1-201ENST00000372409 IGLV1-51P01701 117 aa11.81□□□□□ -0.52
PCIF1-201ENST00000372409 GAGE2BQ13066 116 aa11.81□□□□□ -0.52
PCIF1-201ENST00000372409 GAGE2EQ4V326 116 aa11.81□□□□□ -0.52
PCIF1-201ENST00000372409 ANAPC13Q9BS18 74 aa11.81□□□□□ -0.52
PCIF1-201ENST00000372409 GAGE2DQ9UEU5 116 aa11.81□□□□□ -0.52
PCIF1-201ENST00000372409 FASNP49327 2511 aaKnown RBP11.81□□□□□ -0.52
PCIF1-201ENST00000372409 TRAV26-1A0A087WT03 109 aa11.8□□□□□ -0.52
PCIF1-201ENST00000372409 TRBV6-4A0A1B0GX49 114 aa11.8□□□□□ -0.52
PCIF1-201ENST00000372409 COX7A2LO14548 114 aa11.8□□□□□ -0.52
PCIF1-201ENST00000372409 C15orf53Q8NAA6 179 aa11.8□□□□□ -0.52
PCIF1-201ENST00000372409 CHCHD5Q9BSY4 110 aa11.8□□□□□ -0.52
PCIF1-201ENST00000372409 C19orf73Q9NVV2 129 aa11.8□□□□□ -0.52
PCIF1-201ENST00000372409 IGLV4-60A0A075B6I1 120 aa11.79□□□□□ -0.52
PCIF1-201ENST00000372409 VWFP04275 2813 aa11.79□□□□□ -0.52
PCIF1-201ENST00000372409 CSNK1G2-AS1Q8NCQ2 148 aa11.79□□□□□ -0.52
PCIF1-201ENST00000372409 COX7B2Q8TF08 81 aa11.79□□□□□ -0.52
PCIF1-201ENST00000372409 RNASE1P07998 156 aaKnown RBP11.78□□□□□ -0.52
PCIF1-201ENST00000372409 FN1P02751 2386 aaKnown RBP11.78□□□□□ -0.52
PCIF1-201ENST00000372409 DEFB130BP0DP73 79 aa11.77□□□□□ -0.52
PCIF1-201ENST00000372409 DEFB130AP0DP74 79 aa11.77□□□□□ -0.52
PCIF1-201ENST00000372409 TTC32Q5I0X7 151 aa11.77□□□□□ -0.52
PCIF1-201ENST00000372409 SHISA2Q6UWI4 295 aa11.77□□□□□ -0.52
PCIF1-201ENST00000372409 OVOL2Q9BRP0 275 aa11.77□□□□□ -0.52
PCIF1-201ENST00000372409 FHL2Q14192 279 aa11.77□□□□□ -0.53
PCIF1-201ENST00000372409 MIR7-3HGQ8N6C7 128 aa11.77□□□□□ -0.53
PCIF1-201ENST00000372409 TRBV6-8A0A0A6YYG3 113 aa11.76□□□□□ -0.53
PCIF1-201ENST00000372409 C16orf95Q9H693 158 aa11.76□□□□□ -0.53
PCIF1-201ENST00000372409 GCN1Q92616 2671 aaKnown RBP11.76□□□□□ -0.53
PCIF1-201ENST00000372409 KRTAP1-1Q07627 177 aa11.76□□□□□ -0.53
PCIF1-201ENST00000372409 LINC00158P58513 81 aa11.75□□□□□ -0.53
PCIF1-201ENST00000372409 FAM110AQ9BQ89 295 aa11.74□□□□□ -0.53
PCIF1-201ENST00000372409 UNC79Q9P2D8 2635 aa11.74□□□□□ -0.53
PCIF1-201ENST00000372409 C5orf38Q86SI9 138 aa11.74□□□□□ -0.53
PCIF1-201ENST00000372409 CRPP02741 224 aa11.73□□□□□ -0.53
PCIF1-201ENST00000372409 SND1-IT1Q9HBX3 110 aa11.73□□□□□ -0.53
PCIF1-201ENST00000372409 C11orf68Q9H3H3 251 aaKnown RBP11.73□□□□□ -0.53
PCIF1-201ENST00000372409 FAM218AQ96MZ4 157 aa11.72□□□□□ -0.53
PCIF1-201ENST00000372409 TRAV13-2A0A0B4J235 113 aa11.72□□□□□ -0.53
PCIF1-201ENST00000372409 PFN2P35080 140 aa11.72□□□□□ -0.53
PCIF1-201ENST00000372409 DEFB121Q5J5C9 76 aa11.72□□□□□ -0.53
PCIF1-201ENST00000372409 NDUFV3P56181 108 aaKnown RBP11.71□□□□□ -0.53
PCIF1-201ENST00000372409 IGHV3OR16-9A0A0B4J2B5 98 aa11.71□□□□□ -0.54
PCIF1-201ENST00000372409 BAALC-AS2P0C853 105 aa11.71□□□□□ -0.54
PCIF1-201ENST00000372409 LINC00337Q8N6G1 96 aa11.71□□□□□ -0.54
PCIF1-201ENST00000372409 FAM240AA0A1B0GVK7 77 aa11.7□□□□□ -0.54
PCIF1-201ENST00000372409 Q9HAA7 133 aa11.7□□□□□ -0.54
PCIF1-201ENST00000372409 TRACP01848 142 aa11.69□□□□□ -0.54
PCIF1-201ENST00000372409 PF4P02776 101 aa11.69□□□□□ -0.54
PCIF1-201ENST00000372409 GYPEP15421 78 aa11.69□□□□□ -0.54
PCIF1-201ENST00000372409 OTOGQ6ZRI0 2925 aa11.69□□□□□ -0.54
PCIF1-201ENST00000372409 IGKV2-28A0A075B6P5 120 aa11.68□□□□□ -0.54
PCIF1-201ENST00000372409 A0A096LPF7 62 aa11.68□□□□□ -0.54
PCIF1-201ENST00000372409 IGKV2D-28P01615 120 aa11.68□□□□□ -0.54
PCIF1-201ENST00000372409 SMR3AQ99954 134 aa11.68□□□□□ -0.54
PCIF1-201ENST00000372409 ANK3Q12955 4377 aaKnown RBP11.68□□□□□ -0.54
PCIF1-201ENST00000372409 NHLRC4P0CG21 123 aaPredicted RBP11.68□□□□□ -0.54
PCIF1-201ENST00000372409 CLPSL2Q6UWE3 100 aa11.68□□□□□ -0.54
PCIF1-201ENST00000372409 HIVEP2P31629 2446 aa11.68□□□□□ -0.54
PCIF1-201ENST00000372409 A0A087WZ39 114 aa11.67□□□□□ -0.54
PCIF1-201ENST00000372409 XCL1P47992 114 aa11.67□□□□□ -0.54
PCIF1-201ENST00000372409 LINC00959A0A1B0GUT2 108 aa11.67□□□□□ -0.54
PCIF1-201ENST00000372409 CCL18P55774 89 aa11.67□□□□□ -0.54
PCIF1-201ENST00000372409 HILS1P60008 231 aa11.67□□□□□ -0.54
PCIF1-201ENST00000372409 Q6Q795 121 aa11.67□□□□□ -0.54
PCIF1-201ENST00000372409 RPL28P46779 137 aaKnown RBP11.66□□□□□ -0.54
PCIF1-201ENST00000372409 C6orf226Q5I0X4 101 aa11.66□□□□□ -0.54
PCIF1-201ENST00000372409 FAM222AQ5U5X8 452 aa11.66□□□□□ -0.54
PCIF1-201ENST00000372409 TENM1Q9UKZ4 2725 aa11.66□□□□□ -0.54
PCIF1-201ENST00000372409 PAX4O43316 350 aa11.65□□□□□ -0.54
PCIF1-201ENST00000372409 MRPL23Q16540 153 aaKnown RBP11.65□□□□□ -0.54
PCIF1-201ENST00000372409 SMIM11BQ8TCY0 68 aa11.65□□□□□ -0.54
PCIF1-201ENST00000372409 PPDPFQ9H3Y8 114 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms