RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 IGHV4-61A0A0C4DH41 118 aa8.22□□□□□ -1.09
SMARCA1-201ENST00000371121 MIR7-3HGQ8N6C7 128 aa8.22□□□□□ -1.09
SMARCA1-201ENST00000371121 TMEM89A2RUT3 159 aa8.21□□□□□ -1.1
SMARCA1-201ENST00000371121 IL17DQ8TAD2 202 aa8.21□□□□□ -1.1
SMARCA1-201ENST00000371121 CCL18P55774 89 aa8.2□□□□□ -1.1
SMARCA1-201ENST00000371121 C18orf65Q6ZTR6 163 aa8.2□□□□□ -1.1
SMARCA1-201ENST00000371121 NANOS2P60321 138 aaKnown RBP8.2□□□□□ -1.1
SMARCA1-201ENST00000371121 LYPD5Q6UWN5 251 aa8.2□□□□□ -1.1
SMARCA1-201ENST00000371121 FAM19A1Q7Z5A9 133 aa8.2□□□□□ -1.1
SMARCA1-201ENST00000371121 LECT2O14960 151 aa8.19□□□□□ -1.1
SMARCA1-201ENST00000371121 OR13C6PQ8NH95 151 aa8.19□□□□□ -1.1
SMARCA1-201ENST00000371121 SND1-IT1Q9HBX3 110 aa8.19□□□□□ -1.1
SMARCA1-201ENST00000371121 FLNCQ14315 2725 aa8.19□□□□□ -1.1
SMARCA1-201ENST00000371121 DNAL4O96015 105 aa8.18□□□□□ -1.1
SMARCA1-201ENST00000371121 C19orf84I3L1E1 186 aa8.18□□□□□ -1.1
SMARCA1-201ENST00000371121 PF4P02776 101 aa8.18□□□□□ -1.1
SMARCA1-201ENST00000371121 TRAV13-2A0A0B4J235 113 aa8.17□□□□□ -1.1
SMARCA1-201ENST00000371121 DEFB131AP59861 70 aa8.17□□□□□ -1.1
SMARCA1-201ENST00000371121 C16orf95Q9H693 158 aa8.17□□□□□ -1.1
SMARCA1-201ENST00000371121 LY6G6DO95868 133 aa8.17□□□□□ -1.1
SMARCA1-201ENST00000371121 LINC00167Q96N53 147 aa8.17□□□□□ -1.1
SMARCA1-201ENST00000371121 CFAP46Q8IYW2 2715 aa8.16□□□□□ -1.1
SMARCA1-201ENST00000371121 IGF2RP11717 2491 aa8.16□□□□□ -1.1
SMARCA1-201ENST00000371121 APCP25054 2843 aa8.16□□□□□ -1.1
SMARCA1-201ENST00000371121 CCKP06307 115 aa8.16□□□□□ -1.1
SMARCA1-201ENST00000371121 CRPP02741 224 aa8.16□□□□□ -1.1
SMARCA1-201ENST00000371121 M0R2N4 97 aa8.15□□□□□ -1.1
SMARCA1-201ENST00000371121 SPATA3Q8NHX4 192 aa8.15□□□□□ -1.1
SMARCA1-201ENST00000371121 IGHV4-59P01825 116 aa8.15□□□□□ -1.1
SMARCA1-201ENST00000371121 DEFB136Q30KP8 78 aa8.15□□□□□ -1.1
SMARCA1-201ENST00000371121 TRAV23DV6A0A075B6W5 121 aa8.15□□□□□ -1.11
SMARCA1-201ENST00000371121 H7BZZ5 65 aa8.15□□□□□ -1.11
SMARCA1-201ENST00000371121 Q8NDZ9 215 aa8.15□□□□□ -1.11
SMARCA1-201ENST00000371121 CSPG4Q6UVK1 2322 aa8.14□□□□□ -1.11
SMARCA1-201ENST00000371121 TEX15Q9BXT5 2789 aa8.14□□□□□ -1.11
SMARCA1-201ENST00000371121 SLURP1P55000 103 aa8.14□□□□□ -1.11
SMARCA1-201ENST00000371121 DGAT2L7PQ6IED9 249 aa8.14□□□□□ -1.11
SMARCA1-201ENST00000371121 Q6ZTI0 123 aa8.14□□□□□ -1.11
SMARCA1-201ENST00000371121 COX7B2Q8TF08 81 aa8.14□□□□□ -1.11
SMARCA1-201ENST00000371121 LOC100131303A0A0U1RQF7 123 aa8.13□□□□□ -1.11
SMARCA1-201ENST00000371121 LINC00336Q6ZUF6 198 aa8.13□□□□□ -1.11
SMARCA1-201ENST00000371121 C1orf158Q8N1D5 194 aa8.13□□□□□ -1.11
SMARCA1-201ENST00000371121 IGLV4-60A0A075B6I1 120 aa8.13□□□□□ -1.11
SMARCA1-201ENST00000371121 IGHV3OR16-9A0A0B4J2B5 98 aa8.13□□□□□ -1.11
SMARCA1-201ENST00000371121 PRR3P79522 188 aaKnown RBP8.13□□□□□ -1.11
SMARCA1-201ENST00000371121 RPL36AP83881 106 aaKnown RBP8.13□□□□□ -1.11
SMARCA1-201ENST00000371121 RPL36ALQ969Q0 106 aaKnown RBP8.13□□□□□ -1.11
SMARCA1-201ENST00000371121 FP248Q71RG6 208 aaPredicted RBP8.12□□□□□ -1.11
SMARCA1-201ENST00000371121 COPS9Q8WXC6 57 aa8.12□□□□□ -1.11
SMARCA1-201ENST00000371121 GHRHP01286 108 aa8.12□□□□□ -1.11
SMARCA1-201ENST00000371121 ENHOQ6UWT2 76 aa8.12□□□□□ -1.11
SMARCA1-201ENST00000371121 MAP6D1Q9H9H5 199 aa8.12□□□□□ -1.11
SMARCA1-201ENST00000371121 NOTCH3Q9UM47 2321 aa8.11□□□□□ -1.11
SMARCA1-201ENST00000371121 TRBV6-4A0A1B0GX49 114 aa8.11□□□□□ -1.11
SMARCA1-201ENST00000371121 IGHV4-30-2A0A087WSY4 118 aa8.1□□□□□ -1.11
SMARCA1-201ENST00000371121 H0YGX0 51 aa8.1□□□□□ -1.11
SMARCA1-201ENST00000371121 C2CD3Q4AC94 2353 aa8.1□□□□□ -1.11
SMARCA1-201ENST00000371121 CR1P17927 2039 aa8.1□□□□□ -1.11
SMARCA1-201ENST00000371121 PLAC8L1A1L4L8 177 aa8.1□□□□□ -1.11
SMARCA1-201ENST00000371121 XCL1P47992 114 aa8.1□□□□□ -1.11
SMARCA1-201ENST00000371121 XCL2Q9UBD3 114 aa8.1□□□□□ -1.11
SMARCA1-201ENST00000371121 K7EQD1 137 aa8.1□□□□□ -1.11
SMARCA1-201ENST00000371121 C20orf197Q8N268 126 aa8.09□□□□□ -1.11
SMARCA1-201ENST00000371121 PLA2G2AP14555 144 aa8.09□□□□□ -1.11
SMARCA1-201ENST00000371121 DEFB112Q30KQ8 113 aa8.09□□□□□ -1.11
SMARCA1-201ENST00000371121 PFN2P35080 140 aa8.09□□□□□ -1.12
SMARCA1-201ENST00000371121 ORMDL1Q9P0S3 153 aa8.09□□□□□ -1.12
SMARCA1-201ENST00000371121 CENPEQ02224 2701 aa8.08□□□□□ -1.12
SMARCA1-201ENST00000371121 CREBBPQ92793 2442 aa8.08□□□□□ -1.12
SMARCA1-201ENST00000371121 Q8N814 137 aa8.08□□□□□ -1.12
SMARCA1-201ENST00000371121 OVOL2Q9BRP0 275 aa8.08□□□□□ -1.12
SMARCA1-201ENST00000371121 TRAV10A0A0B4J240 114 aa8.07□□□□□ -1.12
SMARCA1-201ENST00000371121 LINC00158P58513 81 aa8.07□□□□□ -1.12
SMARCA1-201ENST00000371121 TOMM7Q9P0U1 55 aa8.07□□□□□ -1.12
SMARCA1-201ENST00000371121 NBEAL2Q6ZNJ1 2754 aa8.07□□□□□ -1.12
SMARCA1-201ENST00000371121 NDUFC2-KCTD14E9PQ53 114 aa8.07□□□□□ -1.12
SMARCA1-201ENST00000371121 ZNF702PQ9H963 129 aa8.07□□□□□ -1.12
SMARCA1-201ENST00000371121 TRGV1A0A0A0MS02 117 aa8.07□□□□□ -1.12
SMARCA1-201ENST00000371121 GIG44P09565 113 aaPredicted RBP8.07□□□□□ -1.12
SMARCA1-201ENST00000371121 IBA57-AS1B1ANH7 110 aa8.06□□□□□ -1.12
SMARCA1-201ENST00000371121 NDUFC2O95298 119 aa8.06□□□□□ -1.12
SMARCA1-201ENST00000371121 ODF3L2Q3SX64 289 aa8.06□□□□□ -1.12
SMARCA1-201ENST00000371121 A0A087WZ39 114 aa8.06□□□□□ -1.12
SMARCA1-201ENST00000371121 UBE2E2Q96LR5 201 aa8.05□□□□□ -1.12
SMARCA1-201ENST00000371121 TRBV10-1A0A0K0K1A3 114 aa8.05□□□□□ -1.12
SMARCA1-201ENST00000371121 MSMBP08118 114 aa8.05□□□□□ -1.12
SMARCA1-201ENST00000371121 NBL1P41271 181 aa8.05□□□□□ -1.12
SMARCA1-201ENST00000371121 TMEM243Q9BU79 118 aa8.05□□□□□ -1.12
SMARCA1-201ENST00000371121 TRRAPQ9Y4A5 3859 aa8.04□□□□□ -1.12
SMARCA1-201ENST00000371121 INSP01308 110 aa8.04□□□□□ -1.12
SMARCA1-201ENST00000371121 Q6ZQT0 140 aa8.04□□□□□ -1.12
SMARCA1-201ENST00000371121 IGKV3OR2-268A0A0C4DH90 116 aa8.04□□□□□ -1.12
SMARCA1-201ENST00000371121 FAM236DA0A1B0GTK5 79 aa8.04□□□□□ -1.12
SMARCA1-201ENST00000371121 FAM236CP0DP71 79 aa8.04□□□□□ -1.12
SMARCA1-201ENST00000371121 KLKP1Q107X0 134 aa8.04□□□□□ -1.12
SMARCA1-201ENST00000371121 MUC6Q6W4X9 2439 aa8.03□□□□□ -1.12
SMARCA1-201ENST00000371121 PAX4O43316 350 aa8.03□□□□□ -1.12
SMARCA1-201ENST00000371121 JMJD1CQ15652 2540 aa8.03□□□□□ -1.12
SMARCA1-201ENST00000371121 LINC00482Q8N8I6 264 aa8.03□□□□□ -1.12
SMARCA1-201ENST00000371121 RMI2Q96E14 147 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms