RNA–Protein interactions for RNA: ENST00000370536.4

SOX3-201, Transcript of SRY-box 3, humanhuman

APPRIS P1 BASIC

Gene SOX3, Length 2,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3-201ENST00000370536 ANAPC13Q9BS18 74 aa14.79□□□□□ -0.04
SOX3-201ENST00000370536 TRBV6-4A0A1B0GX49 114 aa14.78□□□□□ -0.04
SOX3-201ENST00000370536 TIRAPP58753 221 aa14.78□□□□□ -0.04
SOX3-201ENST00000370536 NTN5Q8WTR8 489 aaPredicted RBP14.78□□□□□ -0.04
SOX3-201ENST00000370536 LITAFQ99732 161 aa14.78□□□□□ -0.04
SOX3-201ENST00000370536 TRBV10-2A0A0K0K1G8 114 aa14.78□□□□□ -0.04
SOX3-201ENST00000370536 RPL13AP40429 203 aaKnown RBP14.78□□□□□ -0.04
SOX3-201ENST00000370536 FHL2Q14192 279 aa14.77□□□□□ -0.04
SOX3-201ENST00000370536 SPANXDQ9BXN6 97 aa14.77□□□□□ -0.05
SOX3-201ENST00000370536 SPANXCQ9NY87 97 aa14.77□□□□□ -0.05
SOX3-201ENST00000370536 NDUFA12Q9UI09 145 aa14.76□□□□□ -0.05
SOX3-201ENST00000370536 A8MZ25 164 aa14.75□□□□□ -0.05
SOX3-201ENST00000370536 TRIAP1O43715 76 aa14.75□□□□□ -0.05
SOX3-201ENST00000370536 CDKN2A-AS1Q9UH64 79 aa14.75□□□□□ -0.05
SOX3-201ENST00000370536 TENM1Q9UKZ4 2725 aa14.75□□□□□ -0.05
SOX3-201ENST00000370536 IGLV5-45A0A087WSX0 123 aa14.75□□□□□ -0.05
SOX3-201ENST00000370536 SNCGO76070 127 aa14.75□□□□□ -0.05
SOX3-201ENST00000370536 DEFB130BP0DP73 79 aa14.75□□□□□ -0.05
SOX3-201ENST00000370536 DEFB130AP0DP74 79 aa14.75□□□□□ -0.05
SOX3-201ENST00000370536 COX6A2Q02221 97 aa14.75□□□□□ -0.05
SOX3-201ENST00000370536 CSDC2Q9Y534 153 aaKnown RBP14.75□□□□□ -0.05
SOX3-201ENST00000370536 PRSS2P07478 247 aa14.74□□□□□ -0.05
SOX3-201ENST00000370536 X6R8D5 127 aa14.74□□□□□ -0.05
SOX3-201ENST00000370536 GAGE2BQ13066 116 aa14.74□□□□□ -0.05
SOX3-201ENST00000370536 GAGE2EQ4V326 116 aa14.74□□□□□ -0.05
SOX3-201ENST00000370536 TMEM243Q9BU79 118 aa14.74□□□□□ -0.05
SOX3-201ENST00000370536 GAGE2DQ9UEU5 116 aa14.74□□□□□ -0.05
SOX3-201ENST00000370536 HERVK_113P63121 156 aa14.72□□□□□ -0.05
SOX3-201ENST00000370536 ICOSQ9Y6W8 199 aa14.72□□□□□ -0.05
SOX3-201ENST00000370536 COX6CP09669 75 aa14.72□□□□□ -0.05
SOX3-201ENST00000370536 FAM19A3Q7Z5A8 133 aa14.72□□□□□ -0.05
SOX3-201ENST00000370536 KIR2DL5BQ8NHK3 375 aa14.72□□□□□ -0.05
SOX3-201ENST00000370536 CDC42SE2Q9NRR3 84 aa14.72□□□□□ -0.05
SOX3-201ENST00000370536 TRAV8-4A0A0B4J246 113 aa14.71□□□□□ -0.05
SOX3-201ENST00000370536 UBE2L6O14933 153 aa14.71□□□□□ -0.05
SOX3-201ENST00000370536 MIAQ16674 131 aa14.71□□□□□ -0.05
SOX3-201ENST00000370536 ADAMTSL4-AS1Q5T5F5 129 aa14.71□□□□□ -0.05
SOX3-201ENST00000370536 LINC00242Q5T6M2 205 aa14.71□□□□□ -0.05
SOX3-201ENST00000370536 UBE2WQ96B02 151 aa14.71□□□□□ -0.05
SOX3-201ENST00000370536 TRAV13-1A0A0B4J241 112 aa14.71□□□□□ -0.06
SOX3-201ENST00000370536 TEX49A0A1B0GTD5 131 aa14.71□□□□□ -0.06
SOX3-201ENST00000370536 TIMM17BO60830 172 aa14.71□□□□□ -0.06
SOX3-201ENST00000370536 Q6Q795 121 aa14.71□□□□□ -0.06
SOX3-201ENST00000370536 GAGE6Q13070 117 aa14.7□□□□□ -0.06
SOX3-201ENST00000370536 LINC00612Q8N6U2 182 aa14.7□□□□□ -0.06
SOX3-201ENST00000370536 C2orf82Q6UX34 121 aa14.69□□□□□ -0.06
SOX3-201ENST00000370536 H3BT86 120 aa14.69□□□□□ -0.06
SOX3-201ENST00000370536 SVIPQ8NHG7 77 aa14.69□□□□□ -0.06
SOX3-201ENST00000370536 TMEM101Q96IK0 257 aa14.69□□□□□ -0.06
SOX3-201ENST00000370536 NDUFA1O15239 70 aa14.68□□□□□ -0.06
SOX3-201ENST00000370536 SMIM9A6NGZ8 99 aa14.67□□□□□ -0.06
SOX3-201ENST00000370536 H7C423 109 aa14.67□□□□□ -0.06
SOX3-201ENST00000370536 NHLRC4P0CG21 123 aaPredicted RBP14.67□□□□□ -0.06
SOX3-201ENST00000370536 ATRQ13535 2644 aa14.67□□□□□ -0.06
SOX3-201ENST00000370536 NDUFV3P56181 108 aaKnown RBP14.66□□□□□ -0.06
SOX3-201ENST00000370536 DEFB135Q30KP9 77 aa14.66□□□□□ -0.06
SOX3-201ENST00000370536 IFITM1P13164 125 aa14.66□□□□□ -0.06
SOX3-201ENST00000370536 TRRAPQ9Y4A5 3859 aa14.65□□□□□ -0.06
SOX3-201ENST00000370536 TRBV6-8A0A0A6YYG3 113 aa14.65□□□□□ -0.06
SOX3-201ENST00000370536 TTC32Q5I0X7 151 aa14.65□□□□□ -0.06
SOX3-201ENST00000370536 IGLV5-39A0A0G2JS06 123 aa14.65□□□□□ -0.06
SOX3-201ENST00000370536 CIRBPQ14011 172 aaKnown RBP14.64□□□□□ -0.07
SOX3-201ENST00000370536 MRPL23Q16540 153 aaKnown RBP14.64□□□□□ -0.07
SOX3-201ENST00000370536 NBEAL2Q6ZNJ1 2754 aa14.64□□□□□ -0.07
SOX3-201ENST00000370536 TEP1Q99973 2627 aaKnown RBP14.64□□□□□ -0.07
SOX3-201ENST00000370536 LST1O00453 97 aa14.63□□□□□ -0.07
SOX3-201ENST00000370536 FAM222AQ5U5X8 452 aa14.63□□□□□ -0.07
SOX3-201ENST00000370536 C15orf53Q8NAA6 179 aa14.63□□□□□ -0.07
SOX3-201ENST00000370536 DEFB4AO15263 64 aa14.63□□□□□ -0.07
SOX3-201ENST00000370536 SMIM1B2RUZ4 78 aa14.62□□□□□ -0.07
SOX3-201ENST00000370536 GYPEP15421 78 aa14.62□□□□□ -0.07
SOX3-201ENST00000370536 APOC4P55056 127 aa14.62□□□□□ -0.07
SOX3-201ENST00000370536 WFDC9Q8NEX5 89 aa14.62□□□□□ -0.07
SOX3-201ENST00000370536 CHCHD5Q9BSY4 110 aa14.62□□□□□ -0.07
SOX3-201ENST00000370536 NPC2P61916 151 aa14.61□□□□□ -0.07
SOX3-201ENST00000370536 DEFB121Q5J5C9 76 aa14.61□□□□□ -0.07
SOX3-201ENST00000370536 IGLV4-60A0A075B6I1 120 aa14.6□□□□□ -0.07
SOX3-201ENST00000370536 CLEC2BQ92478 149 aa14.6□□□□□ -0.07
SOX3-201ENST00000370536 FAM240AA0A1B0GVK7 77 aa14.6□□□□□ -0.07
SOX3-201ENST00000370536 F5H768 121 aa14.6□□□□□ -0.07
SOX3-201ENST00000370536 LYRM9A8MSI8 78 aa14.59□□□□□ -0.07
SOX3-201ENST00000370536 COPS9Q8WXC6 57 aa14.59□□□□□ -0.07
SOX3-201ENST00000370536 Q9H8V8 135 aa14.59□□□□□ -0.07
SOX3-201ENST00000370536 IGHV4-28A0A0C4DH34 117 aa14.58□□□□□ -0.08
SOX3-201ENST00000370536 IGKV3OR2-268A0A0C4DH90 116 aa14.58□□□□□ -0.08
SOX3-201ENST00000370536 B5MCH6 92 aa14.58□□□□□ -0.08
SOX3-201ENST00000370536 PRO0255Q9UI72 69 aa14.58□□□□□ -0.08
SOX3-201ENST00000370536 F8P00451 2351 aa14.57□□□□□ -0.08
SOX3-201ENST00000370536 SS18L2Q9UHA2 77 aa14.57□□□□□ -0.08
SOX3-201ENST00000370536 DAND5Q8N907 189 aa14.56□□□□□ -0.08
SOX3-201ENST00000370536 ZNF625Q96I27 306 aaPredicted RBP14.56□□□□□ -0.08
SOX3-201ENST00000370536 A0A096LPF7 62 aa14.55□□□□□ -0.08
SOX3-201ENST00000370536 HERV-K104P63124 156 aa14.55□□□□□ -0.08
SOX3-201ENST00000370536 WIPF1O43516 503 aa14.54□□□□□ -0.08
SOX3-201ENST00000370536 PAX4O43316 350 aa14.54□□□□□ -0.08
SOX3-201ENST00000370536 IGHV4-30-4P0DP06 118 aa14.54□□□□□ -0.08
SOX3-201ENST00000370536 Q8NAQ8 132 aa14.53□□□□□ -0.08
SOX3-201ENST00000370536 CELA1Q9UNI1 258 aa14.53□□□□□ -0.08
SOX3-201ENST00000370536 LINC00308Q8TCZ7 52 aa14.52□□□□□ -0.09
SOX3-201ENST00000370536 CCDC179H3BU77 68 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms