RNA–Protein interactions for RNA: ENST00000369518.1

SYCP1-201, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYCP1, Length 3,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-201ENST00000369518 NDUFA4O00483 81 aa4.07□□□□□ -1.76
SYCP1-201ENST00000369518 IGKV1-5P01602 117 aa4.07□□□□□ -1.76
SYCP1-201ENST00000369518 PRSS2P07478 247 aa4.07□□□□□ -1.76
SYCP1-201ENST00000369518 LINC01547P58512 204 aaPredicted RBP4.07□□□□□ -1.76
SYCP1-201ENST00000369518 RNASE13Q5GAN3 156 aaKnown RBP4.07□□□□□ -1.76
SYCP1-201ENST00000369518 TMEM170BQ5T4T1 132 aa4.07□□□□□ -1.76
SYCP1-201ENST00000369518 LYPD1Q8N2G4 141 aa4.07□□□□□ -1.76
SYCP1-201ENST00000369518 PSENENQ9NZ42 101 aa4.07□□□□□ -1.76
SYCP1-201ENST00000369518 STARD9Q9P2P6 4700 aa4.07□□□□□ -1.76
SYCP1-201ENST00000369518 PRSS1P07477 247 aa4.07□□□□□ -1.76
SYCP1-201ENST00000369518 LYPD5Q6UWN5 251 aa4.07□□□□□ -1.76
SYCP1-201ENST00000369518 AQP10Q96PS8 301 aa4.07□□□□□ -1.76
SYCP1-201ENST00000369518 Q9HAA7 133 aa4.07□□□□□ -1.76
SYCP1-201ENST00000369518 OSTCQ9NRP0 149 aa4.07□□□□□ -1.76
SYCP1-201ENST00000369518 IZUMO1RA6ND01 250 aa4.07□□□□□ -1.76
SYCP1-201ENST00000369518 KIAA0087Q14695 138 aa4.07□□□□□ -1.76
SYCP1-201ENST00000369518 SERP2Q8N6R1 65 aa4.07□□□□□ -1.76
SYCP1-201ENST00000369518 CHCHD10Q8WYQ3 142 aaPredicted RBP4.07□□□□□ -1.76
SYCP1-201ENST00000369518 TMEM190Q8WZ59 177 aa4.07□□□□□ -1.76
SYCP1-201ENST00000369518 C11orf52Q96A22 123 aa4.07□□□□□ -1.76
SYCP1-201ENST00000369518 MGST2Q99735 147 aa4.07□□□□□ -1.76
SYCP1-201ENST00000369518 S100A4P26447 101 aaKnown RBP4.06□□□□□ -1.76
SYCP1-201ENST00000369518 RPL39P5Q59GN2 51 aa4.06□□□□□ -1.76
SYCP1-201ENST00000369518 SPANXCQ9NY87 97 aa4.06□□□□□ -1.76
SYCP1-201ENST00000369518 F8WEM9 126 aa4.06□□□□□ -1.76
SYCP1-201ENST00000369518 UPK3BQ9BT76 320 aa4.06□□□□□ -1.76
SYCP1-201ENST00000369518 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.05□□□□□ -1.76
SYCP1-201ENST00000369518 IGKV1-6A0A0C4DH72 117 aa4.05□□□□□ -1.76
SYCP1-201ENST00000369518 RPL27AP46776 148 aaKnown RBP4.05□□□□□ -1.76
SYCP1-201ENST00000369518 UBE2BP63146 152 aa4.05□□□□□ -1.76
SYCP1-201ENST00000369518 ORMDL3Q8N138 153 aa4.05□□□□□ -1.76
SYCP1-201ENST00000369518 GVQW1Q8N7I0 195 aa4.05□□□□□ -1.76
SYCP1-201ENST00000369518 UBE2WQ96B02 151 aa4.05□□□□□ -1.76
SYCP1-201ENST00000369518 TRBV12-3P01733 135 aa4.05□□□□□ -1.76
SYCP1-201ENST00000369518 RMI2Q96E14 147 aa4.05□□□□□ -1.76
SYCP1-201ENST00000369518 RETNLBQ9BQ08 111 aa4.05□□□□□ -1.76
SYCP1-201ENST00000369518 A0A1B0GVY2 172 aa4.05□□□□□ -1.76
SYCP1-201ENST00000369518 ZNF815PA8K554 130 aa4.05□□□□□ -1.76
SYCP1-201ENST00000369518 PEX7O00628 323 aa4.05□□□□□ -1.76
SYCP1-201ENST00000369518 PLA2G1BP04054 148 aaKnown RBP4.05□□□□□ -1.76
SYCP1-201ENST00000369518 Q1RN00 199 aa4.05□□□□□ -1.76
SYCP1-201ENST00000369518 Q8N8P6 123 aa4.05□□□□□ -1.76
SYCP1-201ENST00000369518 C11orf21Q9P2W6 132 aa4.05□□□□□ -1.76
SYCP1-201ENST00000369518 HECTD4Q9Y4D8 3996 aa4.05□□□□□ -1.76
SYCP1-201ENST00000369518 LEPROTO15243 131 aa4.04□□□□□ -1.76
SYCP1-201ENST00000369518 CYCSP99999 105 aaKnown RBP4.04□□□□□ -1.76
SYCP1-201ENST00000369518 LINC01545Q5VT33 79 aa4.04□□□□□ -1.76
SYCP1-201ENST00000369518 CHCHD1Q96BP2 118 aaKnown RBP4.04□□□□□ -1.76
SYCP1-201ENST00000369518 TRAV23DV6A0A075B6W5 121 aa4.04□□□□□ -1.76
SYCP1-201ENST00000369518 TRAV12-3A0A0B4J271 114 aa4.04□□□□□ -1.76
SYCP1-201ENST00000369518 E7EUB6 86 aa4.04□□□□□ -1.76
SYCP1-201ENST00000369518 IGHV3-11P01762 117 aa4.04□□□□□ -1.76
SYCP1-201ENST00000369518 HBDP02042 147 aa4.04□□□□□ -1.76
SYCP1-201ENST00000369518 MIFP14174 115 aa4.04□□□□□ -1.76
SYCP1-201ENST00000369518 RNF185Q96GF1 192 aa4.04□□□□□ -1.76
SYCP1-201ENST00000369518 VPS13DQ5THJ4 4388 aa4.04□□□□□ -1.76
SYCP1-201ENST00000369518 SAA1P0DJI8 122 aaPredicted RBP4.04□□□□□ -1.76
SYCP1-201ENST00000369518 Q6ZRM9 215 aa4.04□□□□□ -1.76
SYCP1-201ENST00000369518 TRBV7-7A0A0K0K1E9 115 aa4.03□□□□□ -1.76
SYCP1-201ENST00000369518 HIGD2BQ4VC39 106 aa4.03□□□□□ -1.76
SYCP1-201ENST00000369518 NRACQ8N912 160 aa4.03□□□□□ -1.76
SYCP1-201ENST00000369518 APLNQ9ULZ1 77 aa4.03□□□□□ -1.76
SYCP1-201ENST00000369518 EPPK1P58107 5090 aaKnown RBP4.03□□□□□ -1.76
SYCP1-201ENST00000369518 IGHV1-24A0A0C4DH33 117 aa4.03□□□□□ -1.76
SYCP1-201ENST00000369518 SMCR5Q8TEV8 140 aa4.03□□□□□ -1.76
SYCP1-201ENST00000369518 ZNF355PQ9NSJ1 428 aa4.03□□□□□ -1.76
SYCP1-201ENST00000369518 MSRB1Q9NZV6 116 aa4.03□□□□□ -1.76
SYCP1-201ENST00000369518 IGKV2D-26A0A0A0MRZ7 120 aa4.02□□□□□ -1.77
SYCP1-201ENST00000369518 IGHV6-1A0A0B4J1U7 121 aa4.02□□□□□ -1.77
SYCP1-201ENST00000369518 FAM53AQ6NSI3 398 aaPredicted RBP4.02□□□□□ -1.77
SYCP1-201ENST00000369518 C2orf82Q6UX34 121 aa4.02□□□□□ -1.77
SYCP1-201ENST00000369518 ARHGAP5-AS1Q96IT6 56 aa4.02□□□□□ -1.77
SYCP1-201ENST00000369518 SMDT1Q9H4I9 107 aa4.02□□□□□ -1.77
SYCP1-201ENST00000369518 TRAV10A0A0B4J240 114 aa4.02□□□□□ -1.77
SYCP1-201ENST00000369518 XCL1P47992 114 aa4.02□□□□□ -1.77
SYCP1-201ENST00000369518 KRTAP17-1Q9BYP8 105 aa4.02□□□□□ -1.77
SYCP1-201ENST00000369518 XCL2Q9UBD3 114 aa4.02□□□□□ -1.77
SYCP1-201ENST00000369518 IGLV2-8P01709 118 aa4.02□□□□□ -1.77
SYCP1-201ENST00000369518 IFI27P40305 119 aaPredicted RBP4.02□□□□□ -1.77
SYCP1-201ENST00000369518 ZNF818PQ6ZRF7 136 aa4.02□□□□□ -1.77
SYCP1-201ENST00000369518 C7orf65Q6ZTY9 151 aa4.02□□□□□ -1.77
SYCP1-201ENST00000369518 NDUFA12Q9UI09 145 aa4.02□□□□□ -1.77
SYCP1-201ENST00000369518 TRBV25-1A0A075B6N4 114 aa4.01□□□□□ -1.77
SYCP1-201ENST00000369518 IGLV2-14P01704 120 aa4.01□□□□□ -1.77
SYCP1-201ENST00000369518 PRM2P04554 102 aa4.01□□□□□ -1.77
SYCP1-201ENST00000369518 CFC1BP0CG36 223 aa4.01□□□□□ -1.77
SYCP1-201ENST00000369518 FAM104BQ5XKR9 115 aa4.01□□□□□ -1.77
SYCP1-201ENST00000369518 IMUPQ9GZP8 106 aa4.01□□□□□ -1.77
SYCP1-201ENST00000369518 IGHV7-4-1A0A0J9YVY3 117 aa4.01□□□□□ -1.77
SYCP1-201ENST00000369518 P0DMU3 169 aa4.01□□□□□ -1.77
SYCP1-201ENST00000369518 FAM231AP0DMU4 169 aa4.01□□□□□ -1.77
SYCP1-201ENST00000369518 FAM231CP0DMU5 169 aa4.01□□□□□ -1.77
SYCP1-201ENST00000369518 SUPT4H1P63272 117 aaKnown RBP4.01□□□□□ -1.77
SYCP1-201ENST00000369518 LINC00269Q8N2A0 174 aa4.01□□□□□ -1.77
SYCP1-201ENST00000369518 NMES1Q9C002 83 aa4.01□□□□□ -1.77
SYCP1-201ENST00000369518 DYNC1H1Q14204 4646 aaKnown RBP4.01□□□□□ -1.77
SYCP1-201ENST00000369518 A0A0J9YWU9 116 aa4.01□□□□□ -1.77
SYCP1-201ENST00000369518 CHKB-CPT1BH3BT56 60 aa4.01□□□□□ -1.77
SYCP1-201ENST00000369518 TOMM6Q96B49 74 aa4.01□□□□□ -1.77
SYCP1-201ENST00000369518 NDUFA4L2Q9NRX3 87 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms