RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 XCL1P47992 114 aa11.45□□□□□ -0.58
CHD1L-203ENST00000369259 ENHOQ6UWT2 76 aa11.45□□□□□ -0.58
CHD1L-203ENST00000369259 XCL2Q9UBD3 114 aa11.45□□□□□ -0.58
CHD1L-203ENST00000369259 ZNF292O60281 2723 aa11.44□□□□□ -0.58
CHD1L-203ENST00000369259 EPM2AB3EWF7 344 aa11.44□□□□□ -0.58
CHD1L-203ENST00000369259 JMJD7-PLA2G4BH0Y9G9 81 aa11.44□□□□□ -0.58
CHD1L-203ENST00000369259 PTPRQQ9UMZ3 2332 aa11.43□□□□□ -0.58
CHD1L-203ENST00000369259 TRBV10-3A0A0K0K1G6 114 aa11.43□□□□□ -0.58
CHD1L-203ENST00000369259 PAX4O43316 350 aa11.43□□□□□ -0.58
CHD1L-203ENST00000369259 SERP1Q9Y6X1 66 aa11.43□□□□□ -0.58
CHD1L-203ENST00000369259 UCNP55089 124 aa11.42□□□□□ -0.58
CHD1L-203ENST00000369259 ABCA2Q9BZC7 2435 aa11.42□□□□□ -0.58
CHD1L-203ENST00000369259 IBA57-AS1B1ANH7 110 aa11.42□□□□□ -0.58
CHD1L-203ENST00000369259 TRBV10-1A0A0K0K1A3 114 aa11.41□□□□□ -0.58
CHD1L-203ENST00000369259 LINC00167Q96N53 147 aa11.41□□□□□ -0.58
CHD1L-203ENST00000369259 PRO0628Q9UI54 55 aa11.41□□□□□ -0.58
CHD1L-203ENST00000369259 K7EQD1 137 aa11.41□□□□□ -0.58
CHD1L-203ENST00000369259 UBE2L6O14933 153 aa11.41□□□□□ -0.58
CHD1L-203ENST00000369259 SPTA1P02549 2419 aa11.41□□□□□ -0.58
CHD1L-203ENST00000369259 AKAP6Q13023 2319 aa11.41□□□□□ -0.58
CHD1L-203ENST00000369259 TRBV6-4A0A1B0GX49 114 aa11.4□□□□□ -0.58
CHD1L-203ENST00000369259 LY6G6DO95868 133 aa11.4□□□□□ -0.58
CHD1L-203ENST00000369259 INSP01308 110 aa11.4□□□□□ -0.58
CHD1L-203ENST00000369259 IGHV4-61A0A0C4DH41 118 aa11.4□□□□□ -0.58
CHD1L-203ENST00000369259 UBL5Q9BZL1 73 aa11.39□□□□□ -0.59
CHD1L-203ENST00000369259 H7BZZ5 65 aa11.39□□□□□ -0.59
CHD1L-203ENST00000369259 NBASA2RRP1 2371 aa11.38□□□□□ -0.59
CHD1L-203ENST00000369259 TRGV1A0A0A0MS02 117 aa11.38□□□□□ -0.59
CHD1L-203ENST00000369259 BCE1O60756 84 aa11.38□□□□□ -0.59
CHD1L-203ENST00000369259 LINC00336Q6ZUF6 198 aa11.38□□□□□ -0.59
CHD1L-203ENST00000369259 RIF1Q5UIP0 2472 aaKnown RBP11.37□□□□□ -0.59
CHD1L-203ENST00000369259 TMEM256-PLSCR3K7ERE1 68 aa11.37□□□□□ -0.59
CHD1L-203ENST00000369259 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.37□□□□□ -0.595e-13■■■■■ 29.8
CHD1L-203ENST00000369259 CELSR1Q9NYQ6 3014 aa11.37□□□□□ -0.59
CHD1L-203ENST00000369259 ZFHX2Q9C0A1 2572 aaPredicted RBP11.37□□□□□ -0.59
CHD1L-203ENST00000369259 TRAV7A0A075B6U4 112 aa11.36□□□□□ -0.59
CHD1L-203ENST00000369259 CREBBPQ92793 2442 aa11.36□□□□□ -0.59
CHD1L-203ENST00000369259 MUC6Q6W4X9 2439 aa11.36□□□□□ -0.59
CHD1L-203ENST00000369259 Q8N814 137 aa11.35□□□□□ -0.59
CHD1L-203ENST00000369259 MAP6D1Q9H9H5 199 aa11.35□□□□□ -0.59
CHD1L-203ENST00000369259 IGKV3OR2-268A0A0C4DH90 116 aa11.34□□□□□ -0.59
CHD1L-203ENST00000369259 IGHV3OR16-9A0A0B4J2B5 98 aa11.34□□□□□ -0.59
CHD1L-203ENST00000369259 IL17DQ8TAD2 202 aa11.34□□□□□ -0.59
CHD1L-203ENST00000369259 IGHV4-59P01825 116 aa11.33□□□□□ -0.6
CHD1L-203ENST00000369259 KLKP1Q107X0 134 aa11.33□□□□□ -0.6
CHD1L-203ENST00000369259 UBE2E2Q96LR5 201 aa11.33□□□□□ -0.6
CHD1L-203ENST00000369259 A0A087WZ39 114 aa11.32□□□□□ -0.6
CHD1L-203ENST00000369259 SLURP1P55000 103 aa11.32□□□□□ -0.6
CHD1L-203ENST00000369259 Q6ZTI0 123 aa11.31□□□□□ -0.6
CHD1L-203ENST00000369259 A0A096LNT2 108 aa11.3□□□□□ -0.6
CHD1L-203ENST00000369259 SMIM26A0A096LP01 95 aa11.3□□□□□ -0.6
CHD1L-203ENST00000369259 AVPP01185 164 aa11.3□□□□□ -0.6
CHD1L-203ENST00000369259 MSMBP08118 114 aa11.3□□□□□ -0.6
CHD1L-203ENST00000369259 NBL1P41271 181 aa11.3□□□□□ -0.6
CHD1L-203ENST00000369259 NANOS2P60321 138 aaKnown RBP11.3□□□□□ -0.6
CHD1L-203ENST00000369259 TMEM86BQ8N661 226 aa11.3□□□□□ -0.6
CHD1L-203ENST00000369259 C16orf95Q9H693 158 aa11.3□□□□□ -0.6
CHD1L-203ENST00000369259 J3QLI3 93 aa11.29□□□□□ -0.6
CHD1L-203ENST00000369259 C1orf158Q8N1D5 194 aa11.29□□□□□ -0.6
CHD1L-203ENST00000369259 PIEZO1Q92508 2521 aa11.28□□□□□ -0.6
CHD1L-203ENST00000369259 IGLV4-60A0A075B6I1 120 aa11.28□□□□□ -0.6
CHD1L-203ENST00000369259 DEFB112Q30KQ8 113 aa11.28□□□□□ -0.6
CHD1L-203ENST00000369259 C6orf226Q5I0X4 101 aa11.28□□□□□ -0.6
CHD1L-203ENST00000369259 FP248Q71RG6 208 aaPredicted RBP11.28□□□□□ -0.6
CHD1L-203ENST00000369259 LINC00482Q8N8I6 264 aa11.28□□□□□ -0.6
CHD1L-203ENST00000369259 C1orf43Q9BWL3 253 aa11.28□□□□□ -0.6
CHD1L-203ENST00000369259 DEFB136Q30KP8 78 aa11.27□□□□□ -0.6
CHD1L-203ENST00000369259 RNASE1P07998 156 aaKnown RBP11.27□□□□□ -0.61
CHD1L-203ENST00000369259 SNURFQ9Y675 71 aa11.27□□□□□ -0.61
CHD1L-203ENST00000369259 Q6ZQT0 140 aa11.26□□□□□ -0.61
CHD1L-203ENST00000369259 RMI2Q96E14 147 aa11.26□□□□□ -0.61
CHD1L-203ENST00000369259 C11orf68Q9H3H3 251 aaKnown RBP11.26□□□□□ -0.61
CHD1L-203ENST00000369259 TRAV10A0A0B4J240 114 aa11.26□□□□□ -0.61
CHD1L-203ENST00000369259 LINC01547P58512 204 aaPredicted RBP11.26□□□□□ -0.61
CHD1L-203ENST00000369259 F8WEM9 126 aa11.25□□□□□ -0.61
CHD1L-203ENST00000369259 C18orf65Q6ZTR6 163 aa11.25□□□□□ -0.61
CHD1L-203ENST00000369259 LOC100131303A0A0U1RQF7 123 aa11.25□□□□□ -0.61
CHD1L-203ENST00000369259 PRR3P79522 188 aaKnown RBP11.25□□□□□ -0.61
CHD1L-203ENST00000369259 RBM3P98179 157 aaKnown RBP11.25□□□□□ -0.61
CHD1L-203ENST00000369259 DYNLRB2Q8TF09 96 aa11.24□□□□□ -0.61
CHD1L-203ENST00000369259 COL12A1Q99715 3063 aa11.24□□□□□ -0.61
CHD1L-203ENST00000369259 IGHV4-30-2A0A087WSY4 118 aa11.23□□□□□ -0.61
CHD1L-203ENST00000369259 LOC110117498A0A087WWA1 95 aa11.23□□□□□ -0.61
CHD1L-203ENST00000369259 HAMPP81172 84 aa11.23□□□□□ -0.61
CHD1L-203ENST00000369259 A0A1W2PRX2 142 aa11.23□□□□□ -0.61
CHD1L-203ENST00000369259 RPL35AP18077 110 aaKnown RBP11.23□□□□□ -0.61
CHD1L-203ENST00000369259 C2CD3Q4AC94 2353 aa11.23□□□□□ -0.61
CHD1L-203ENST00000369259 NOP10Q9NPE3 64 aaKnown RBP11.23□□□□□ -0.61
CHD1L-203ENST00000369259 STHQ8IWL8 128 aa11.21□□□□□ -0.61
CHD1L-203ENST00000369259 WFDC11Q8NEX6 87 aa11.21□□□□□ -0.61
CHD1L-203ENST00000369259 TRBV6-8A0A0A6YYG3 113 aa11.21□□□□□ -0.62
CHD1L-203ENST00000369259 DEFB114Q30KQ6 69 aa11.21□□□□□ -0.62
CHD1L-203ENST00000369259 Q6ZVQ6 151 aa11.21□□□□□ -0.62
CHD1L-203ENST00000369259 C11orf44Q8N8P7 122 aa11.21□□□□□ -0.62
CHD1L-203ENST00000369259 TRBV7-6A0A0J9YX20 115 aa11.2□□□□□ -0.62
CHD1L-203ENST00000369259 LINC00959A0A1B0GUT2 108 aa11.2□□□□□ -0.62
CHD1L-203ENST00000369259 C19orf84I3L1E1 186 aa11.2□□□□□ -0.62
CHD1L-203ENST00000369259 ZNF561-AS1K7EIQ3 104 aa11.2□□□□□ -0.62
CHD1L-203ENST00000369259 NDUFC1O43677 76 aa11.2□□□□□ -0.62
CHD1L-203ENST00000369259 ZNF702PQ9H963 129 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms