RNA–Protein interactions for RNA: ENST00000363016.1

RNU6-249P-201, Transcript of RNA, U6 small nuclear 249, pseudogene, humanhuman

BASIC

Gene RNU6-249P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-249P-201ENST00000363016 HIGD2AQ9BW72 106 aa3.34□□□□□ -1.87
RNU6-249P-201ENST00000363016 TTTY12Q9BZ98 90 aa3.34□□□□□ -1.87
RNU6-249P-201ENST00000363016 PLXNB2O15031 1838 aa3.34□□□□□ -1.87
RNU6-249P-201ENST00000363016 IGKV3-7A0A075B6H7 116 aa3.33□□□□□ -1.88
RNU6-249P-201ENST00000363016 A0A1B0GUV1 79 aa3.33□□□□□ -1.88
RNU6-249P-201ENST00000363016 IGIPA6NJ69 53 aa3.33□□□□□ -1.88
RNU6-249P-201ENST00000363016 SPTBP11277 2137 aa3.33□□□□□ -1.88
RNU6-249P-201ENST00000363016 PDE6GP18545 87 aa3.33□□□□□ -1.88
RNU6-249P-201ENST00000363016 WFDC10AQ9H1F0 79 aa3.33□□□□□ -1.88
RNU6-249P-201ENST00000363016 PLAC8Q9NZF1 115 aa3.33□□□□□ -1.88
RNU6-249P-201ENST00000363016 KLK12Q9UKR0 248 aa3.33□□□□□ -1.88
RNU6-249P-201ENST00000363016 MALRD1Q5VYJ5 2156 aa3.33□□□□□ -1.88
RNU6-249P-201ENST00000363016 NDUFA3O95167 84 aa3.32□□□□□ -1.88
RNU6-249P-201ENST00000363016 ARTNQ5T4W7 220 aa3.32□□□□□ -1.88
RNU6-249P-201ENST00000363016 Q5W150 140 aa3.32□□□□□ -1.88
RNU6-249P-201ENST00000363016 HEATR5BQ9P2D3 2071 aa3.32□□□□□ -1.88
RNU6-249P-201ENST00000363016 PI4KAP42356 2102 aa3.32□□□□□ -1.88
RNU6-249P-201ENST00000363016 ZGRF1Q86YA3 2104 aa3.32□□□□□ -1.88
RNU6-249P-201ENST00000363016 IGKV3D-15A0A087WSY6 115 aa3.31□□□□□ -1.88
RNU6-249P-201ENST00000363016 GAFA1Q96PS6 74 aa3.31□□□□□ -1.88
RNU6-249P-201ENST00000363016 H0YGX0 51 aa3.3□□□□□ -1.88
RNU6-249P-201ENST00000363016 MRPS21P82921 87 aaKnown RBP3.3□□□□□ -1.88
RNU6-249P-201ENST00000363016 FREM3P0C091 2139 aa3.29□□□□□ -1.88
RNU6-249P-201ENST00000363016 ABCA7Q8IZY2 2146 aa3.29□□□□□ -1.88
RNU6-249P-201ENST00000363016 MDC1Q14676 2089 aaKnown RBP3.29□□□□□ -1.88
RNU6-249P-201ENST00000363016 TCF20Q9UGU0 1960 aaKnown RBP3.29□□□□□ -1.88
RNU6-249P-201ENST00000363016 COL5A1P20908 1838 aaPredicted RBP3.29□□□□□ -1.88
RNU6-249P-201ENST00000363016 FAM168BA1KXE4 195 aa3.29□□□□□ -1.88
RNU6-249P-201ENST00000363016 COX17Q14061 63 aa3.29□□□□□ -1.88
RNU6-249P-201ENST00000363016 ZCCHC13Q8WW36 166 aaKnown RBP3.29□□□□□ -1.88
RNU6-249P-201ENST00000363016 SDK2Q58EX2 2172 aa3.29□□□□□ -1.88
RNU6-249P-201ENST00000363016 PLA2G2AP14555 144 aa3.28□□□□□ -1.88
RNU6-249P-201ENST00000363016 ZNF137PP52743 207 aa3.28□□□□□ -1.88
RNU6-249P-201ENST00000363016 RPL38P63173 70 aaKnown RBP3.28□□□□□ -1.88
RNU6-249P-201ENST00000363016 DEFB114Q30KQ6 69 aa3.28□□□□□ -1.88
RNU6-249P-201ENST00000363016 HCP5Q6MZN7 132 aa3.28□□□□□ -1.88
RNU6-249P-201ENST00000363016 C9orf163Q8N9P6 203 aa3.28□□□□□ -1.88
RNU6-249P-201ENST00000363016 PATE1Q8WXA2 126 aa3.28□□□□□ -1.88
RNU6-249P-201ENST00000363016 A0A1W2PNU3 283 aaPredicted RBP3.27□□□□□ -1.89
RNU6-249P-201ENST00000363016 IGKV3-20P01619 116 aa3.27□□□□□ -1.89
RNU6-249P-201ENST00000363016 DEFB112Q30KQ8 113 aa3.27□□□□□ -1.89
RNU6-249P-201ENST00000363016 IGFL4Q6B9Z1 124 aa3.27□□□□□ -1.89
RNU6-249P-201ENST00000363016 LINC00322Q6ZN03 302 aaPredicted RBP3.27□□□□□ -1.89
RNU6-249P-201ENST00000363016 TYMSOSQ8TAI1 123 aa3.27□□□□□ -1.89
RNU6-249P-201ENST00000363016 KLK9Q9UKQ9 250 aa3.27□□□□□ -1.89
RNU6-249P-201ENST00000363016 CR1P17927 2039 aa3.27□□□□□ -1.89
RNU6-249P-201ENST00000363016 TET1Q8NFU7 2136 aa3.26□□□□□ -1.89
RNU6-249P-201ENST00000363016 DIDO1Q9BTC0 2240 aaKnown RBP3.26□□□□□ -1.89
RNU6-249P-201ENST00000363016 NDUFA4O00483 81 aa3.26□□□□□ -1.89
RNU6-249P-201ENST00000363016 CTSGP08311 255 aa3.26□□□□□ -1.89
RNU6-249P-201ENST00000363016 RNASE3P12724 160 aaKnown RBP3.26□□□□□ -1.89
RNU6-249P-201ENST00000363016 SPINK7P58062 85 aa3.26□□□□□ -1.89
RNU6-249P-201ENST00000363016 MRGPRG-AS1Q2M3A8 158 aa3.26□□□□□ -1.89
RNU6-249P-201ENST00000363016 SPATA8Q6RVD6 105 aa3.26□□□□□ -1.89
RNU6-249P-201ENST00000363016 SPINT4Q6UDR6 99 aa3.26□□□□□ -1.89
RNU6-249P-201ENST00000363016 SPRR4Q96PI1 79 aa3.26□□□□□ -1.89
RNU6-249P-201ENST00000363016 PSORS1C2Q9UIG4 136 aa3.26□□□□□ -1.89
RNU6-249P-201ENST00000363016 KIAA0100Q14667 2235 aaKnown RBP3.25□□□□□ -1.89
RNU6-249P-201ENST00000363016 TRGV4A0A0C4DH28 118 aa3.25□□□□□ -1.89
RNU6-249P-201ENST00000363016 HAMPP81172 84 aa3.25□□□□□ -1.89
RNU6-249P-201ENST00000363016 NDPQ00604 133 aa3.25□□□□□ -1.89
RNU6-249P-201ENST00000363016 INTS1Q8N201 2190 aaKnown RBP3.25□□□□□ -1.89
RNU6-249P-201ENST00000363016 LOC110117498A0A087WWA1 95 aa3.24□□□□□ -1.89
RNU6-249P-201ENST00000363016 IGKV3OR2-268A0A0C4DH90 116 aa3.24□□□□□ -1.89
RNU6-249P-201ENST00000363016 IL9P15248 144 aa3.24□□□□□ -1.89
RNU6-249P-201ENST00000363016 Q6ZTI0 123 aa3.24□□□□□ -1.89
RNU6-249P-201ENST00000363016 IGLV4-69A0A075B6H9 119 aa3.23□□□□□ -1.89
RNU6-249P-201ENST00000363016 IGLV3-19P01714 112 aa3.23□□□□□ -1.89
RNU6-249P-201ENST00000363016 ARFGEF3Q5TH69 2177 aa3.23□□□□□ -1.89
RNU6-249P-201ENST00000363016 ZNF625Q96I27 306 aaPredicted RBP3.23□□□□□ -1.89
RNU6-249P-201ENST00000363016 KIF26BQ2KJY2 2108 aa3.23□□□□□ -1.89
RNU6-249P-201ENST00000363016 A0A0J9YWU9 116 aa3.22□□□□□ -1.89
RNU6-249P-201ENST00000363016 TRBV6-4A0A1B0GX49 114 aa3.22□□□□□ -1.89
RNU6-249P-201ENST00000363016 IGLV3-1P01715 115 aa3.22□□□□□ -1.89
RNU6-249P-201ENST00000363016 LCE2AQ5TA79 106 aaPredicted RBP3.22□□□□□ -1.89
RNU6-249P-201ENST00000363016 ARHGAP32A7KAX9 2087 aa3.22□□□□□ -1.89
RNU6-249P-201ENST00000363016 MED12Q93074 2177 aa3.21□□□□□ -1.9
RNU6-249P-201ENST00000363016 IGKV2-40A0A087WW87 121 aaPredicted RBP3.21□□□□□ -1.9
RNU6-249P-201ENST00000363016 ETDCA0A1B0GVM5 59 aa3.21□□□□□ -1.9
RNU6-249P-201ENST00000363016 CPSF4LA6NMK7 179 aaKnown RBP3.21□□□□□ -1.9
RNU6-249P-201ENST00000363016 IGKV2D-40P01614 121 aaPredicted RBP3.21□□□□□ -1.9
RNU6-249P-201ENST00000363016 RPS27LQ71UM5 84 aaKnown RBP3.21□□□□□ -1.9
RNU6-249P-201ENST00000363016 COA5Q86WW8 74 aa3.21□□□□□ -1.9
RNU6-249P-201ENST00000363016 CABIN1Q9Y6J0 2220 aa3.21□□□□□ -1.9
RNU6-249P-201ENST00000363016 ESPL1Q14674 2120 aa3.2□□□□□ -1.9
RNU6-249P-201ENST00000363016 ZNF861PO60384 105 aa3.2□□□□□ -1.9
RNU6-249P-201ENST00000363016 TFF3Q07654 80 aa3.2□□□□□ -1.9
RNU6-249P-201ENST00000363016 KRTAP15-1Q3LI76 137 aa3.2□□□□□ -1.9
RNU6-249P-201ENST00000363016 LCE2CQ5TA81 110 aa3.2□□□□□ -1.9
RNU6-249P-201ENST00000363016 PRO2289Q9P1D8 64 aa3.2□□□□□ -1.9
RNU6-249P-201ENST00000363016 DNAJC13O75165 2243 aa3.19□□□□□ -1.9
RNU6-249P-201ENST00000363016 IAPPP10997 89 aa3.19□□□□□ -1.9
RNU6-249P-201ENST00000363016 RPL37AP61513 92 aaKnown RBP3.19□□□□□ -1.9
RNU6-249P-201ENST00000363016 LY6EQ16553 131 aa3.19□□□□□ -1.9
RNU6-249P-201ENST00000363016 TRGV2A0A075B6R0 118 aa3.18□□□□□ -1.9
RNU6-249P-201ENST00000363016 DEFB132Q7Z7B7 95 aa3.18□□□□□ -1.9
RNU6-249P-201ENST00000363016 KRTAP3-1Q9BYR8 98 aa3.18□□□□□ -1.9
RNU6-249P-201ENST00000363016 KCNQ1DNQ9H478 68 aa3.18□□□□□ -1.9
RNU6-249P-201ENST00000363016 NUP214P35658 2090 aaPredicted RBP3.17□□□□□ -1.9
RNU6-249P-201ENST00000363016 NCR3O14931 201 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms