RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 TM2D2Q9BX73 214 aa14.37□□□□□ -0.11
MAP1LC3A-201ENST00000360668 H3BRM9 83 aa14.36□□□□□ -0.11
MAP1LC3A-201ENST00000360668 LGALS3P17931 250 aaKnown RBP14.36□□□□□ -0.11
MAP1LC3A-201ENST00000360668 ESRGQ1W209 222 aa14.36□□□□□ -0.11
MAP1LC3A-201ENST00000360668 IGHV1-58A0A0C4DH39 117 aa14.35□□□□□ -0.11
MAP1LC3A-201ENST00000360668 A6NDN8 102 aa14.35□□□□□ -0.11
MAP1LC3A-201ENST00000360668 COX6A2Q02221 97 aa14.35□□□□□ -0.11
MAP1LC3A-201ENST00000360668 STAB2Q8WWQ8 2551 aa14.35□□□□□ -0.11
MAP1LC3A-201ENST00000360668 CDKN2A-AS1Q9UH64 79 aa14.34□□□□□ -0.11
MAP1LC3A-201ENST00000360668 IGKV3OR2-268A0A0C4DH90 116 aa14.33□□□□□ -0.12
MAP1LC3A-201ENST00000360668 LINC00959A0A1B0GUT2 108 aa14.33□□□□□ -0.12
MAP1LC3A-201ENST00000360668 CCL25O15444 150 aa14.33□□□□□ -0.12
MAP1LC3A-201ENST00000360668 CEND1Q8N111 149 aa14.33□□□□□ -0.12
MAP1LC3A-201ENST00000360668 IGLL5B9A064 214 aa14.32□□□□□ -0.12
MAP1LC3A-201ENST00000360668 ANGP03950 147 aaKnown RBP14.32□□□□□ -0.12
MAP1LC3A-201ENST00000360668 SCGB1D4Q6XE38 83 aa14.32□□□□□ -0.12
MAP1LC3A-201ENST00000360668 Q8N3U1 123 aa14.32□□□□□ -0.12
MAP1LC3A-201ENST00000360668 TSPEAR-AS2P59090 65 aa14.31□□□□□ -0.12
MAP1LC3A-201ENST00000360668 LINC00269Q8N2A0 174 aa14.31□□□□□ -0.12
MAP1LC3A-201ENST00000360668 IGHV3-30-3P0DP02 117 aa14.3□□□□□ -0.12
MAP1LC3A-201ENST00000360668 SS18Q15532 418 aa14.3□□□□□ -0.12
MAP1LC3A-201ENST00000360668 HIST1H4GQ99525 98 aa14.3□□□□□ -0.12
MAP1LC3A-201ENST00000360668 WFDC10BQ8IUB3 73 aa14.3□□□□□ -0.12
MAP1LC3A-201ENST00000360668 SPANXB1Q9NS25 103 aaPredicted RBP14.3□□□□□ -0.12
MAP1LC3A-201ENST00000360668 TAX1BP3O14907 124 aa14.29□□□□□ -0.12
MAP1LC3A-201ENST00000360668 SPINK8P0C7L1 97 aa14.29□□□□□ -0.12
MAP1LC3A-201ENST00000360668 GCSHP23434 173 aa14.29□□□□□ -0.12
MAP1LC3A-201ENST00000360668 COX11Q9Y6N1 276 aa14.29□□□□□ -0.12
MAP1LC3A-201ENST00000360668 REG3AQ06141 175 aa14.28□□□□□ -0.12
MAP1LC3A-201ENST00000360668 IGHV3-64A0A075B6Q5 118 aa14.27□□□□□ -0.12
MAP1LC3A-201ENST00000360668 TRAV8-3A0A0A6YYJ7 113 aa14.27□□□□□ -0.12
MAP1LC3A-201ENST00000360668 CLPSL2Q6UWE3 100 aa14.27□□□□□ -0.12
MAP1LC3A-201ENST00000360668 PRR34Q9NV39 138 aa14.27□□□□□ -0.12
MAP1LC3A-201ENST00000360668 IGHV3OR16-9A0A0B4J2B5 98 aa14.26□□□□□ -0.13
MAP1LC3A-201ENST00000360668 IGLV5-39A0A0G2JS06 123 aa14.26□□□□□ -0.13
MAP1LC3A-201ENST00000360668 DYNC2H1Q8NCM8 4307 aaKnown RBP14.26□□□□□ -0.13
MAP1LC3A-201ENST00000360668 IGHV3-30P01768 117 aa14.26□□□□□ -0.13
MAP1LC3A-201ENST00000360668 IGHV3-33P01772 117 aa14.26□□□□□ -0.13
MAP1LC3A-201ENST00000360668 SMIM13P0DJ93 91 aa14.26□□□□□ -0.13
MAP1LC3A-201ENST00000360668 IGHV3-30-5P0DP03 117 aa14.26□□□□□ -0.13
MAP1LC3A-201ENST00000360668 KLK12Q9UKR0 248 aa14.26□□□□□ -0.13
MAP1LC3A-201ENST00000360668 SMIM1B2RUZ4 78 aa14.25□□□□□ -0.13
MAP1LC3A-201ENST00000360668 PTTG1IPP53801 180 aa14.25□□□□□ -0.13
MAP1LC3A-201ENST00000360668 FXYD2P54710 66 aa14.25□□□□□ -0.13
MAP1LC3A-201ENST00000360668 CCL18P55774 89 aa14.25□□□□□ -0.13
MAP1LC3A-201ENST00000360668 SRSF9Q13242 221 aaKnown RBP eCLIP14.25□□□□□ -0.13
MAP1LC3A-201ENST00000360668 LINC01556Q5JQF7 62 aa14.25□□□□□ -0.13
MAP1LC3A-201ENST00000360668 ZFAND6Q6FIF0 208 aa14.25□□□□□ -0.13
MAP1LC3A-201ENST00000360668 LINC00588Q9Y4M8 146 aa14.25□□□□□ -0.13
MAP1LC3A-201ENST00000360668 A0A087WZ39 114 aa14.23□□□□□ -0.13
MAP1LC3A-201ENST00000360668 XCL1P47992 114 aa14.22□□□□□ -0.13
MAP1LC3A-201ENST00000360668 NDUFA12Q9UI09 145 aa14.22□□□□□ -0.13
MAP1LC3A-201ENST00000360668 NUPR2A6NF83 97 aa14.22□□□□□ -0.13
MAP1LC3A-201ENST00000360668 DNAH10OSP0CZ25 163 aa14.22□□□□□ -0.13
MAP1LC3A-201ENST00000360668 CD164L2Q6UWJ8 174 aa14.22□□□□□ -0.13
MAP1LC3A-201ENST00000360668 CHCHD10Q8WYQ3 142 aaPredicted RBP14.22□□□□□ -0.13
MAP1LC3A-201ENST00000360668 A0A0J9YXY3 114 aa14.21□□□□□ -0.14
MAP1LC3A-201ENST00000360668 TMEM238LA0A1B0GVL6 79 aa14.21□□□□□ -0.14
MAP1LC3A-201ENST00000360668 A6NJY4 79 aa14.21□□□□□ -0.14
MAP1LC3A-201ENST00000360668 ENHOQ6UWT2 76 aa14.21□□□□□ -0.14
MAP1LC3A-201ENST00000360668 LINC01561Q8N1V8 128 aa14.21□□□□□ -0.14
MAP1LC3A-201ENST00000360668 WWC2-AS2Q96NR7 200 aa14.21□□□□□ -0.14
MAP1LC3A-201ENST00000360668 A0A1B0GWB2 263 aa14.2□□□□□ -0.14
MAP1LC3A-201ENST00000360668 CRPP02741 224 aa14.2□□□□□ -0.14
MAP1LC3A-201ENST00000360668 C10orf126Q8N4M7 172 aa14.2□□□□□ -0.14
MAP1LC3A-201ENST00000360668 UPK3BQ9BT76 320 aa14.2□□□□□ -0.14
MAP1LC3A-201ENST00000360668 APLNQ9ULZ1 77 aa14.2□□□□□ -0.14
MAP1LC3A-201ENST00000360668 C9orf118A6NHY6 69 aa14.19□□□□□ -0.14
MAP1LC3A-201ENST00000360668 TMEM238C9JI98 176 aa14.19□□□□□ -0.14
MAP1LC3A-201ENST00000360668 NDUFA1O15239 70 aa14.19□□□□□ -0.14
MAP1LC3A-201ENST00000360668 TIMM17BO60830 172 aa14.19□□□□□ -0.14
MAP1LC3A-201ENST00000360668 Q6ZVH6 145 aa14.19□□□□□ -0.14
MAP1LC3A-201ENST00000360668 KLK5Q9Y337 293 aaPredicted RBP14.19□□□□□ -0.14
MAP1LC3A-201ENST00000360668 DNAH7Q8WXX0 4024 aa14.18□□□□□ -0.14
MAP1LC3A-201ENST00000360668 TRAV8-4A0A0B4J246 113 aa14.18□□□□□ -0.14
MAP1LC3A-201ENST00000360668 C5orf38Q86SI9 138 aa14.18□□□□□ -0.14
MAP1LC3A-201ENST00000360668 UBE2WQ96B02 151 aa14.18□□□□□ -0.14
MAP1LC3A-201ENST00000360668 IGLV10-54A0A075B6I4 117 aa14.17□□□□□ -0.14
MAP1LC3A-201ENST00000360668 MIAQ16674 131 aa14.17□□□□□ -0.14
MAP1LC3A-201ENST00000360668 K7EP13 123 aa14.16□□□□□ -0.14
MAP1LC3A-201ENST00000360668 FOXI1Q12951 378 aa14.16□□□□□ -0.14
MAP1LC3A-201ENST00000360668 NHP2Q9NX24 153 aaKnown RBP14.16□□□□□ -0.14
MAP1LC3A-201ENST00000360668 COX7A2LO14548 114 aa14.15□□□□□ -0.14
MAP1LC3A-201ENST00000360668 HERV-K104P63124 156 aa14.13□□□□□ -0.15
MAP1LC3A-201ENST00000360668 COX7B2Q8TF08 81 aa14.13□□□□□ -0.15
MAP1LC3A-201ENST00000360668 LITAFQ99732 161 aa14.13□□□□□ -0.15
MAP1LC3A-201ENST00000360668 SPANXDQ9BXN6 97 aa14.13□□□□□ -0.15
MAP1LC3A-201ENST00000360668 SPANXCQ9NY87 97 aa14.13□□□□□ -0.15
MAP1LC3A-201ENST00000360668 GAGE12HA6NDE8 117 aa14.13□□□□□ -0.15
MAP1LC3A-201ENST00000360668 CIRBPQ14011 172 aaKnown RBP14.13□□□□□ -0.15
MAP1LC3A-201ENST00000360668 VAMP3Q15836 100 aa14.12□□□□□ -0.15
MAP1LC3A-201ENST00000360668 RPL24P83731 157 aaKnown RBP14.11□□□□□ -0.15
MAP1LC3A-201ENST00000360668 UBE2V1Q13404 147 aa14.11□□□□□ -0.15
MAP1LC3A-201ENST00000360668 ZNF625Q96I27 306 aaPredicted RBP14.11□□□□□ -0.15
MAP1LC3A-201ENST00000360668 IFITM1P13164 125 aa14.1□□□□□ -0.15
MAP1LC3A-201ENST00000360668 RAB37Q96AX2 223 aa14.1□□□□□ -0.15
MAP1LC3A-201ENST00000360668 Q9H8V8 135 aa14.1□□□□□ -0.15
MAP1LC3A-201ENST00000360668 CSMD3Q7Z407 3707 aa14.1□□□□□ -0.15
MAP1LC3A-201ENST00000360668 MALP21145 153 aa14.09□□□□□ -0.15
MAP1LC3A-201ENST00000360668 SFTA2Q6UW10 78 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms