RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 UBE2D3P61077 147 aa11.84□□□□□ -0.51
SCAF1-201ENST00000360565 UBE2D2P62837 147 aa11.84□□□□□ -0.51
SCAF1-201ENST00000360565 CDC42SE2Q9NRR3 84 aa11.84□□□□□ -0.51
SCAF1-201ENST00000360565 SLPIP03973 132 aa11.84□□□□□ -0.51
SCAF1-201ENST00000360565 HIGD2BQ4VC39 106 aa11.84□□□□□ -0.51
SCAF1-201ENST00000360565 LST1O00453 97 aa11.83□□□□□ -0.52
SCAF1-201ENST00000360565 CCL18P55774 89 aa11.83□□□□□ -0.52
SCAF1-201ENST00000360565 C1orf158Q8N1D5 194 aa11.83□□□□□ -0.52
SCAF1-201ENST00000360565 ETDCA0A1B0GVM5 59 aa11.82□□□□□ -0.52
SCAF1-201ENST00000360565 TMEM256-PLSCR3K7ERE1 68 aa11.82□□□□□ -0.52
SCAF1-201ENST00000360565 DIRC1Q969H9 104 aa11.82□□□□□ -0.52
SCAF1-201ENST00000360565 CHCHD7Q9BUK0 85 aa11.82□□□□□ -0.52
SCAF1-201ENST00000360565 RBM3P98179 157 aaKnown RBP11.82□□□□□ -0.52
SCAF1-201ENST00000360565 RBMY1FQ15415 496 aaKnown RBP11.82□□□□□ -0.52
SCAF1-201ENST00000360565 Q6ZSN1 163 aa11.82□□□□□ -0.52
SCAF1-201ENST00000360565 CITED1Q99966 193 aa11.82□□□□□ -0.52
SCAF1-201ENST00000360565 ATOX1O00244 68 aa11.81□□□□□ -0.52
SCAF1-201ENST00000360565 HILS1P60008 231 aa11.81□□□□□ -0.52
SCAF1-201ENST00000360565 LINC00694P0DN24 101 aa11.81□□□□□ -0.52
SCAF1-201ENST00000360565 NDUFV3P56181 108 aaKnown RBP11.81□□□□□ -0.52
SCAF1-201ENST00000360565 UBE2BP63146 152 aa11.81□□□□□ -0.52
SCAF1-201ENST00000360565 MUC4Q99102 2169 aa11.8□□□□□ -0.52
SCAF1-201ENST00000360565 XGP55808 180 aa11.8□□□□□ -0.52
SCAF1-201ENST00000360565 SMIM20Q8N5G0 67 aa11.8□□□□□ -0.52
SCAF1-201ENST00000360565 AMELXQ99217 191 aa11.79□□□□□ -0.52
SCAF1-201ENST00000360565 SPATA25Q9BR10 227 aa11.79□□□□□ -0.52
SCAF1-201ENST00000360565 LINC00959A0A1B0GUT2 108 aa11.79□□□□□ -0.52
SCAF1-201ENST00000360565 LINC00315P59091 139 aa11.79□□□□□ -0.52
SCAF1-201ENST00000360565 XAGE1AQ9HD64 81 aa11.79□□□□□ -0.52
SCAF1-201ENST00000360565 ADAMTSL4-AS1Q5T5F5 129 aa11.79□□□□□ -0.52
SCAF1-201ENST00000360565 LINC00526Q96FQ7 95 aa11.79□□□□□ -0.52
SCAF1-201ENST00000360565 hADV29S1A0JD25 119 aa11.78□□□□□ -0.52
SCAF1-201ENST00000360565 VCANP13611 3396 aa11.78□□□□□ -0.52
SCAF1-201ENST00000360565 SMIM1B2RUZ4 78 aa11.78□□□□□ -0.52
SCAF1-201ENST00000360565 LY6G6DO95868 133 aa11.78□□□□□ -0.52
SCAF1-201ENST00000360565 COX6A2Q02221 97 aa11.78□□□□□ -0.52
SCAF1-201ENST00000360565 ZNF292O60281 2723 aa11.77□□□□□ -0.52
SCAF1-201ENST00000360565 COL27A1Q8IZC6 1860 aaPredicted RBP11.77□□□□□ -0.52
SCAF1-201ENST00000360565 IGHV4-28A0A0C4DH34 117 aa11.77□□□□□ -0.53
SCAF1-201ENST00000360565 C6orf99Q4VX62 202 aa11.76□□□□□ -0.53
SCAF1-201ENST00000360565 SMR3AQ99954 134 aa11.76□□□□□ -0.53
SCAF1-201ENST00000360565 LINC01546A6NGU7 62 aa11.76□□□□□ -0.53
SCAF1-201ENST00000360565 MIFP14174 115 aa11.76□□□□□ -0.53
SCAF1-201ENST00000360565 FAM110AQ9BQ89 295 aa11.76□□□□□ -0.53
SCAF1-201ENST00000360565 LAMA1P25391 3075 aa11.76□□□□□ -0.53
SCAF1-201ENST00000360565 FUSP35637 526 aaKnown RBP eCLIP11.76□□□□□ -0.53
SCAF1-201ENST00000360565 IGLV1-51P01701 117 aa11.75□□□□□ -0.53
SCAF1-201ENST00000360565 BEAN1Q3B7T3 259 aa11.74□□□□□ -0.53
SCAF1-201ENST00000360565 CD164L2Q6UWJ8 174 aa11.74□□□□□ -0.53
SCAF1-201ENST00000360565 SDIM1Q6ZPB5 146 aa11.74□□□□□ -0.53
SCAF1-201ENST00000360565 COX7BP24311 80 aa11.74□□□□□ -0.53
SCAF1-201ENST00000360565 SMIM11BQ8TCY0 68 aa11.74□□□□□ -0.53
SCAF1-201ENST00000360565 FAM19A4Q96LR4 140 aa11.74□□□□□ -0.53
SCAF1-201ENST00000360565 NREPQ16612 68 aa11.73□□□□□ -0.53
SCAF1-201ENST00000360565 CDK2AP2O75956 126 aa11.73□□□□□ -0.53
SCAF1-201ENST00000360565 C11orf45Q8TAV5 145 aa11.73□□□□□ -0.53
SCAF1-201ENST00000360565 MAP1AP78559 2803 aaPredicted RBP11.73□□□□□ -0.53
SCAF1-201ENST00000360565 HECTD1Q9ULT8 2610 aa11.73□□□□□ -0.53
SCAF1-201ENST00000360565 IGLV4-60A0A075B6I1 120 aa11.72□□□□□ -0.53
SCAF1-201ENST00000360565 CLUHP3Q96NS8 147 aa11.72□□□□□ -0.53
SCAF1-201ENST00000360565 DEFB131BA0A096LNP1 70 aa11.7□□□□□ -0.54
SCAF1-201ENST00000360565 H3BQ85 93 aa11.7□□□□□ -0.54
SCAF1-201ENST00000360565 EYSQ5T1H1 3165 aa11.69□□□□□ -0.54
SCAF1-201ENST00000360565 TRAV23DV6A0A075B6W5 121 aa11.69□□□□□ -0.54
SCAF1-201ENST00000360565 USP24Q9UPU5 2620 aa11.69□□□□□ -0.54
SCAF1-201ENST00000360565 CSDC2Q9Y534 153 aaKnown RBP11.69□□□□□ -0.54
SCAF1-201ENST00000360565 PLA2G2AP14555 144 aa11.68□□□□□ -0.54
SCAF1-201ENST00000360565 Q9UF83 564 aa11.68□□□□□ -0.54
SCAF1-201ENST00000360565 PDE6GP18545 87 aa11.67□□□□□ -0.54
SCAF1-201ENST00000360565 KIR2DL5BQ8NHK3 375 aa11.67□□□□□ -0.54
SCAF1-201ENST00000360565 DSPP15924 2871 aaKnown RBP11.67□□□□□ -0.54
SCAF1-201ENST00000360565 CELSR3Q9NYQ7 3312 aa11.67□□□□□ -0.54
SCAF1-201ENST00000360565 FHL2Q14192 279 aa11.67□□□□□ -0.54
SCAF1-201ENST00000360565 C11orf72Q8NBR9 251 aa11.67□□□□□ -0.54
SCAF1-201ENST00000360565 DNAH14Q0VDD8 3507 aa11.66□□□□□ -0.54
SCAF1-201ENST00000360565 LELP1Q5T871 98 aa11.66□□□□□ -0.54
SCAF1-201ENST00000360565 Q8IZM0 81 aa11.66□□□□□ -0.54
SCAF1-201ENST00000360565 A0A087WZ39 114 aa11.65□□□□□ -0.54
SCAF1-201ENST00000360565 KPRPQ5T749 579 aaPredicted RBP11.64□□□□□ -0.55
SCAF1-201ENST00000360565 Q6ZQY7 126 aa11.64□□□□□ -0.55
SCAF1-201ENST00000360565 KLK9Q2XQG4 91 aa11.64□□□□□ -0.55
SCAF1-201ENST00000360565 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.63□□□□□ -0.55
SCAF1-201ENST00000360565 F8P00451 2351 aa11.63□□□□□ -0.55
SCAF1-201ENST00000360565 IGKV2-24A0A0C4DH68 120 aa11.63□□□□□ -0.55
SCAF1-201ENST00000360565 UPK3BQ9BT76 320 aa11.63□□□□□ -0.55
SCAF1-201ENST00000360565 OXLD1Q5BKU9 147 aa11.62□□□□□ -0.55
SCAF1-201ENST00000360565 C9orf116Q5BN46 136 aaPredicted RBP11.62□□□□□ -0.55
SCAF1-201ENST00000360565 UNQ6190/PRO20217Q6UXQ8 127 aa11.62□□□□□ -0.55
SCAF1-201ENST00000360565 IGHV4-30-4P0DP06 118 aa11.62□□□□□ -0.55
SCAF1-201ENST00000360565 UQCRQO14949 82 aa11.61□□□□□ -0.55
SCAF1-201ENST00000360565 CYSRT1A8MQ03 144 aa11.61□□□□□ -0.55
SCAF1-201ENST00000360565 ENHOQ6UWT2 76 aa11.61□□□□□ -0.55
SCAF1-201ENST00000360565 PRR3P79522 188 aaKnown RBP11.61□□□□□ -0.55
SCAF1-201ENST00000360565 SYCNQ0VAF6 134 aa11.61□□□□□ -0.55
SCAF1-201ENST00000360565 Q8N2B8 174 aa11.6□□□□□ -0.55
SCAF1-201ENST00000360565 RPL28P46779 137 aaKnown RBP11.6□□□□□ -0.55
SCAF1-201ENST00000360565 SCXQ7RTU7 201 aa11.6□□□□□ -0.55
SCAF1-201ENST00000360565 FLNAP21333 2647 aaKnown RBP11.59□□□□□ -0.55
SCAF1-201ENST00000360565 C20orf197Q8N268 126 aa11.59□□□□□ -0.55
SCAF1-201ENST00000360565 IMUPQ9GZP8 106 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms