RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 UBE2D2P62837 147 aa6.71□□□□□ -1.33
GTF3C2-202ENST00000359541 Q6ZTI0 123 aa6.71□□□□□ -1.33
GTF3C2-202ENST00000359541 OVOL2Q9BRP0 275 aa6.71□□□□□ -1.33
GTF3C2-202ENST00000359541 TMEM243Q9BU79 118 aa6.71□□□□□ -1.33
GTF3C2-202ENST00000359541 TRAV8-3A0A0A6YYJ7 113 aa6.71□□□□□ -1.34
GTF3C2-202ENST00000359541 IFITM1P13164 125 aa6.71□□□□□ -1.34
GTF3C2-202ENST00000359541 BAHCC1Q9P281 2608 aa6.71□□□□□ -1.34
GTF3C2-202ENST00000359541 ZNF625Q96I27 306 aaPredicted RBP6.71□□□□□ -1.34
GTF3C2-202ENST00000359541 CELSR2Q9HCU4 2923 aa6.71□□□□□ -1.34
GTF3C2-202ENST00000359541 PLA2G2AP14555 144 aa6.7□□□□□ -1.34
GTF3C2-202ENST00000359541 SPANXCQ9NY87 97 aa6.7□□□□□ -1.34
GTF3C2-202ENST00000359541 SMIM9A6NGZ8 99 aa6.7□□□□□ -1.34
GTF3C2-202ENST00000359541 TIMM17BO60830 172 aa6.7□□□□□ -1.34
GTF3C2-202ENST00000359541 IL17DQ8TAD2 202 aa6.7□□□□□ -1.34
GTF3C2-202ENST00000359541 UBR5O95071 2799 aaPredicted RBP6.7□□□□□ -1.34
GTF3C2-202ENST00000359541 SLC25A20O43772 301 aa6.7□□□□□ -1.34
GTF3C2-202ENST00000359541 MIAQ16674 131 aa6.7□□□□□ -1.34
GTF3C2-202ENST00000359541 TRAV13-1A0A0B4J241 112 aa6.69□□□□□ -1.34
GTF3C2-202ENST00000359541 DEFB4AO15263 64 aa6.69□□□□□ -1.34
GTF3C2-202ENST00000359541 TEN1Q86WV5 123 aa6.69□□□□□ -1.34
GTF3C2-202ENST00000359541 TRBV6-4A0A1B0GX49 114 aa6.69□□□□□ -1.34
GTF3C2-202ENST00000359541 F8WDY8 70 aa6.69□□□□□ -1.34
GTF3C2-202ENST00000359541 H7C423 109 aa6.69□□□□□ -1.34
GTF3C2-202ENST00000359541 IGHV3-33P01772 117 aa6.69□□□□□ -1.34
GTF3C2-202ENST00000359541 CDKN2A-AS1Q9UH64 79 aa6.69□□□□□ -1.34
GTF3C2-202ENST00000359541 GCN1Q92616 2671 aaKnown RBP6.68□□□□□ -1.34
GTF3C2-202ENST00000359541 A0A0U1RQV1 116 aa6.68□□□□□ -1.34
GTF3C2-202ENST00000359541 UBE2WQ96B02 151 aa6.68□□□□□ -1.34
GTF3C2-202ENST00000359541 UTP20O75691 2785 aaKnown RBP6.68□□□□□ -1.34
GTF3C2-202ENST00000359541 NDUFA1O15239 70 aa6.68□□□□□ -1.34
GTF3C2-202ENST00000359541 TCL1BO95988 128 aa6.68□□□□□ -1.34
GTF3C2-202ENST00000359541 Q9UF83 564 aa6.68□□□□□ -1.34
GTF3C2-202ENST00000359541 PRO0461Q9UI25 63 aa6.67□□□□□ -1.34
GTF3C2-202ENST00000359541 IGLV5-45A0A087WSX0 123 aa6.67□□□□□ -1.34
GTF3C2-202ENST00000359541 XGP55808 180 aa6.67□□□□□ -1.34
GTF3C2-202ENST00000359541 FOXI1Q12951 378 aa6.67□□□□□ -1.34
GTF3C2-202ENST00000359541 SMR3AQ99954 134 aa6.67□□□□□ -1.34
GTF3C2-202ENST00000359541 KRTAP1-1Q07627 177 aa6.67□□□□□ -1.34
GTF3C2-202ENST00000359541 PRIMA1Q86XR5 153 aa6.67□□□□□ -1.34
GTF3C2-202ENST00000359541 LINC00694P0DN24 101 aa6.66□□□□□ -1.34
GTF3C2-202ENST00000359541 SEC61GP60059 68 aa6.66□□□□□ -1.34
GTF3C2-202ENST00000359541 CLPSL2Q6UWE3 100 aa6.66□□□□□ -1.34
GTF3C2-202ENST00000359541 HRCT1Q6UXD1 115 aa6.66□□□□□ -1.34
GTF3C2-202ENST00000359541 Q9H8V8 135 aa6.66□□□□□ -1.34
GTF3C2-202ENST00000359541 CRPP02741 224 aa6.66□□□□□ -1.34
GTF3C2-202ENST00000359541 TRBV30A0A0K0K1B3 111 aa6.65□□□□□ -1.34
GTF3C2-202ENST00000359541 LINC00242Q5T6M2 205 aa6.65□□□□□ -1.34
GTF3C2-202ENST00000359541 WFDC10AQ9H1F0 79 aa6.65□□□□□ -1.34
GTF3C2-202ENST00000359541 GHRHP01286 108 aa6.65□□□□□ -1.35
GTF3C2-202ENST00000359541 INAFM2P0DMQ5 153 aa6.65□□□□□ -1.35
GTF3C2-202ENST00000359541 C9orf153Q5TBE3 101 aa6.65□□□□□ -1.35
GTF3C2-202ENST00000359541 ANKRD29Q8N6D5 301 aa6.65□□□□□ -1.35
GTF3C2-202ENST00000359541 FAM104AQ969W3 186 aa6.65□□□□□ -1.35
GTF3C2-202ENST00000359541 CDC42SE2Q9NRR3 84 aa6.65□□□□□ -1.35
GTF3C2-202ENST00000359541 ICOSQ9Y6W8 199 aa6.64□□□□□ -1.35
GTF3C2-202ENST00000359541 FBN2P35556 2912 aa6.64□□□□□ -1.35
GTF3C2-202ENST00000359541 ZANQ9Y493 2812 aa6.64□□□□□ -1.35
GTF3C2-202ENST00000359541 INAFM1C9JVW0 142 aa6.64□□□□□ -1.35
GTF3C2-202ENST00000359541 MALP21145 153 aa6.64□□□□□ -1.35
GTF3C2-202ENST00000359541 FAM19A3Q7Z5A8 133 aa6.64□□□□□ -1.35
GTF3C2-202ENST00000359541 C9orf66Q5T8R8 295 aa6.64□□□□□ -1.35
GTF3C2-202ENST00000359541 FAM19A5Q7Z5A7 132 aaPredicted RBP6.64□□□□□ -1.35
GTF3C2-202ENST00000359541 COL6A5A8TX70 2615 aa6.63□□□□□ -1.35
GTF3C2-202ENST00000359541 IGLV5-39A0A0G2JS06 123 aa6.63□□□□□ -1.35
GTF3C2-202ENST00000359541 LITAFQ99732 161 aa6.63□□□□□ -1.35
GTF3C2-202ENST00000359541 NOTCH1P46531 2555 aa6.63□□□□□ -1.35
GTF3C2-202ENST00000359541 A8MZ25 164 aa6.63□□□□□ -1.35
GTF3C2-202ENST00000359541 ACYP1P07311 99 aa6.63□□□□□ -1.35
GTF3C2-202ENST00000359541 LINC01620Q4KN68 170 aa6.63□□□□□ -1.35
GTF3C2-202ENST00000359541 NTM-AS1Q6ZSK4 140 aa6.63□□□□□ -1.35
GTF3C2-202ENST00000359541 SPATA25Q9BR10 227 aa6.63□□□□□ -1.35
GTF3C2-202ENST00000359541 KLK5Q9Y337 293 aaPredicted RBP6.63□□□□□ -1.35
GTF3C2-202ENST00000359541 SMIM1B2RUZ4 78 aa6.62□□□□□ -1.35
GTF3C2-202ENST00000359541 H3BT86 120 aa6.62□□□□□ -1.35
GTF3C2-202ENST00000359541 ZNF561-AS1K7EIQ3 104 aa6.62□□□□□ -1.35
GTF3C2-202ENST00000359541 NDUFV3P56181 108 aaKnown RBP6.62□□□□□ -1.35
GTF3C2-202ENST00000359541 LINC00158P58513 81 aa6.62□□□□□ -1.35
GTF3C2-202ENST00000359541 SBSPONQ8IVN8 264 aa6.62□□□□□ -1.35
GTF3C2-202ENST00000359541 NTN5Q8WTR8 489 aaPredicted RBP6.62□□□□□ -1.35
GTF3C2-202ENST00000359541 C19orf73Q9NVV2 129 aa6.62□□□□□ -1.35
GTF3C2-202ENST00000359541 TRAV13-2A0A0B4J235 113 aa6.62□□□□□ -1.35
GTF3C2-202ENST00000359541 GIG44P09565 113 aaPredicted RBP6.62□□□□□ -1.35
GTF3C2-202ENST00000359541 ADAMTSL4-AS1Q5T5F5 129 aa6.62□□□□□ -1.35
GTF3C2-202ENST00000359541 CUBNO60494 3623 aa6.62□□□□□ -1.35
GTF3C2-202ENST00000359541 TRBV6-8A0A0A6YYG3 113 aa6.62□□□□□ -1.35
GTF3C2-202ENST00000359541 COX6A2Q02221 97 aa6.62□□□□□ -1.35
GTF3C2-202ENST00000359541 KIR2DL5BQ8NHK3 375 aa6.62□□□□□ -1.35
GTF3C2-202ENST00000359541 TRBV10-2A0A0K0K1G8 114 aa6.61□□□□□ -1.35
GTF3C2-202ENST00000359541 TRIAP1O43715 76 aa6.61□□□□□ -1.35
GTF3C2-202ENST00000359541 CRLF1O75462 422 aa6.61□□□□□ -1.35
GTF3C2-202ENST00000359541 UBE2DNLQ8IWF7 75 aa6.61□□□□□ -1.35
GTF3C2-202ENST00000359541 LINC00482Q8N8I6 264 aa6.61□□□□□ -1.35
GTF3C2-202ENST00000359541 CSNK1G2-AS1Q8NCQ2 148 aa6.61□□□□□ -1.35
GTF3C2-202ENST00000359541 LINC00308Q8TCZ7 52 aa6.61□□□□□ -1.35
GTF3C2-202ENST00000359541 S100A7L2Q5SY68 101 aa6.61□□□□□ -1.35
GTF3C2-202ENST00000359541 SMCPP49901 116 aaPredicted RBP6.6□□□□□ -1.35
GTF3C2-202ENST00000359541 APOC4P55056 127 aa6.6□□□□□ -1.35
GTF3C2-202ENST00000359541 CARD19Q96LW7 228 aa6.6□□□□□ -1.35
GTF3C2-202ENST00000359541 PLAC8L1A1L4L8 177 aa6.6□□□□□ -1.35
GTF3C2-202ENST00000359541 FHL2Q14192 279 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms