RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 FXYD2P54710 66 aa6.55□□□□□ -1.36
ATG4A-202ENST00000345734 PMVKQ15126 192 aa6.55□□□□□ -1.36
ATG4A-202ENST00000345734 SLC25A29Q8N8R3 303 aa6.55□□□□□ -1.36
ATG4A-202ENST00000345734 CHCHD7Q9BUK0 85 aa6.55□□□□□ -1.36
ATG4A-202ENST00000345734 IGLV4-69A0A075B6H9 119 aa6.54□□□□□ -1.36
ATG4A-202ENST00000345734 C9JAW5 83 aa6.54□□□□□ -1.36
ATG4A-202ENST00000345734 CEMP1Q6PRD7 247 aaPredicted RBP6.54□□□□□ -1.36
ATG4A-202ENST00000345734 FAM19A5Q7Z5A7 132 aaPredicted RBP6.54□□□□□ -1.36
ATG4A-202ENST00000345734 CEND1Q8N111 149 aa6.54□□□□□ -1.36
ATG4A-202ENST00000345734 TRBV7-3A0A075B6L6 115 aa6.53□□□□□ -1.36
ATG4A-202ENST00000345734 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.53□□□□□ -1.36
ATG4A-202ENST00000345734 IGKV2-29A2NJV5 120 aaPredicted RBP6.53□□□□□ -1.36
ATG4A-202ENST00000345734 DEFB135Q30KP9 77 aa6.53□□□□□ -1.36
ATG4A-202ENST00000345734 NFE4Q86UQ8 179 aa6.53□□□□□ -1.36
ATG4A-202ENST00000345734 FAM104AQ969W3 186 aa6.53□□□□□ -1.36
ATG4A-202ENST00000345734 IGLV4-3A0A075B6K6 122 aa6.53□□□□□ -1.36
ATG4A-202ENST00000345734 TRBV20-1A0A075B6N2 111 aa6.53□□□□□ -1.36
ATG4A-202ENST00000345734 C11orf86A6NJI1 115 aa6.53□□□□□ -1.36
ATG4A-202ENST00000345734 C3orf56Q8N813 242 aa6.53□□□□□ -1.36
ATG4A-202ENST00000345734 PRADC1Q9BSG0 188 aa6.53□□□□□ -1.36
ATG4A-202ENST00000345734 CHAC1Q9BUX1 264 aa6.53□□□□□ -1.36
ATG4A-202ENST00000345734 NHP2Q9NX24 153 aaKnown RBP6.53□□□□□ -1.36
ATG4A-202ENST00000345734 LOC100131303A0A0U1RQF7 123 aa6.52□□□□□ -1.37
ATG4A-202ENST00000345734 DEFB130BP0DP73 79 aa6.52□□□□□ -1.37
ATG4A-202ENST00000345734 DEFB130AP0DP74 79 aa6.52□□□□□ -1.37
ATG4A-202ENST00000345734 SBSPONQ8IVN8 264 aa6.52□□□□□ -1.37
ATG4A-202ENST00000345734 MAPKAPK5-AS1Q8N8E1 139 aa6.52□□□□□ -1.37
ATG4A-202ENST00000345734 TRBV10-1A0A0K0K1A3 114 aa6.52□□□□□ -1.37
ATG4A-202ENST00000345734 LINC00694P0DN24 101 aa6.52□□□□□ -1.37
ATG4A-202ENST00000345734 APOC4P55056 127 aa6.52□□□□□ -1.37
ATG4A-202ENST00000345734 RPL36AP83881 106 aaKnown RBP6.52□□□□□ -1.37
ATG4A-202ENST00000345734 RNASE13Q5GAN3 156 aaKnown RBP6.52□□□□□ -1.37
ATG4A-202ENST00000345734 RPL36ALQ969Q0 106 aaKnown RBP6.52□□□□□ -1.37
ATG4A-202ENST00000345734 TMEM101Q96IK0 257 aa6.52□□□□□ -1.37
ATG4A-202ENST00000345734 TRGV4A0A0C4DH28 118 aa6.51□□□□□ -1.37
ATG4A-202ENST00000345734 DEFB4AO15263 64 aa6.51□□□□□ -1.37
ATG4A-202ENST00000345734 IGHV4-30-4P0DP06 118 aa6.51□□□□□ -1.37
ATG4A-202ENST00000345734 KRTAP10-11P60412 298 aa6.51□□□□□ -1.37
ATG4A-202ENST00000345734 UBE2D3P61077 147 aa6.51□□□□□ -1.37
ATG4A-202ENST00000345734 UBE2D2P62837 147 aa6.51□□□□□ -1.37
ATG4A-202ENST00000345734 FHL2Q14192 279 aa6.51□□□□□ -1.37
ATG4A-202ENST00000345734 C12orf74Q32Q52 190 aa6.51□□□□□ -1.37
ATG4A-202ENST00000345734 UBE2D4Q9Y2X8 147 aa6.51□□□□□ -1.37
ATG4A-202ENST00000345734 PYGO1Q9Y3Y4 419 aa6.51□□□□□ -1.37
ATG4A-202ENST00000345734 LINC00612Q8N6U2 182 aa6.5□□□□□ -1.37
ATG4A-202ENST00000345734 TRBV6-4A0A1B0GX49 114 aa6.5□□□□□ -1.37
ATG4A-202ENST00000345734 K7ERJ3 54 aa6.5□□□□□ -1.37
ATG4A-202ENST00000345734 NTM-AS1Q6ZSK4 140 aa6.5□□□□□ -1.37
ATG4A-202ENST00000345734 CARD19Q96LW7 228 aa6.5□□□□□ -1.37
ATG4A-202ENST00000345734 NOTCH1P46531 2555 aa6.49□□□□□ -1.37
ATG4A-202ENST00000345734 FAM222AQ5U5X8 452 aa6.49□□□□□ -1.37
ATG4A-202ENST00000345734 DAZ4Q86SG3 579 aaKnown RBP6.49□□□□□ -1.37
ATG4A-202ENST00000345734 AMELXQ99217 191 aa6.49□□□□□ -1.37
ATG4A-202ENST00000345734 DAZ3Q9NR90 486 aaKnown RBP6.49□□□□□ -1.37
ATG4A-202ENST00000345734 IGHV4-28A0A0C4DH34 117 aa6.49□□□□□ -1.37
ATG4A-202ENST00000345734 A0A0J9YXV3 536 aa6.49□□□□□ -1.37
ATG4A-202ENST00000345734 PAPPA-AS1Q5QFB9 102 aa6.49□□□□□ -1.37
ATG4A-202ENST00000345734 TMEM170BQ5T4T1 132 aa6.49□□□□□ -1.37
ATG4A-202ENST00000345734 TRBV25-1A0A075B6N4 114 aa6.48□□□□□ -1.37
ATG4A-202ENST00000345734 ATP5G1P05496 136 aa6.48□□□□□ -1.37
ATG4A-202ENST00000345734 KRTAP19-4Q3LI73 84 aa6.48□□□□□ -1.37
ATG4A-202ENST00000345734 LINC00476Q8WZB0 136 aa6.47□□□□□ -1.37
ATG4A-202ENST00000345734 UQCRQO14949 82 aa6.47□□□□□ -1.37
ATG4A-202ENST00000345734 Q8NAQ8 132 aa6.47□□□□□ -1.37
ATG4A-202ENST00000345734 NBEAL1Q6ZS30 2694 aa6.47□□□□□ -1.37
ATG4A-202ENST00000345734 MYMXA0A1B0GTQ4 84 aa6.46□□□□□ -1.37
ATG4A-202ENST00000345734 LYRM9A8MSI8 78 aa6.46□□□□□ -1.37
ATG4A-202ENST00000345734 ZNF22P17026 224 aaPredicted RBP6.46□□□□□ -1.37
ATG4A-202ENST00000345734 TSPEAR-AS2P59090 65 aa6.46□□□□□ -1.37
ATG4A-202ENST00000345734 SEC61GP60059 68 aa6.46□□□□□ -1.37
ATG4A-202ENST00000345734 HERVK_113P61574 105 aa6.46□□□□□ -1.37
ATG4A-202ENST00000345734 EGFEM1PQ0D2K5 195 aa6.46□□□□□ -1.37
ATG4A-202ENST00000345734 C3orf22Q8N5N4 141 aa6.46□□□□□ -1.37
ATG4A-202ENST00000345734 IMUPQ9GZP8 106 aa6.46□□□□□ -1.37
ATG4A-202ENST00000345734 CELA1Q9UNI1 258 aa6.46□□□□□ -1.37
ATG4A-202ENST00000345734 TRBV7-7A0A0K0K1E9 115 aa6.46□□□□□ -1.38
ATG4A-202ENST00000345734 SCGB1C2P0DMR2 95 aa6.46□□□□□ -1.38
ATG4A-202ENST00000345734 C9orf153Q5TBE3 101 aa6.46□□□□□ -1.38
ATG4A-202ENST00000345734 LINC01600Q96MT4 127 aa6.46□□□□□ -1.38
ATG4A-202ENST00000345734 PRO0628Q9UI54 55 aa6.46□□□□□ -1.38
ATG4A-202ENST00000345734 TENM3Q9P273 2699 aa6.45□□□□□ -1.38
ATG4A-202ENST00000345734 IGHV3-64A0A075B6Q5 118 aa6.45□□□□□ -1.38
ATG4A-202ENST00000345734 LOC107984640A0A0U1RRK4 108 aa6.45□□□□□ -1.38
ATG4A-202ENST00000345734 TMEM223A0PJW6 202 aa6.45□□□□□ -1.38
ATG4A-202ENST00000345734 ZNF815PA8K554 130 aa6.45□□□□□ -1.38
ATG4A-202ENST00000345734 HERVK_113P63121 156 aa6.45□□□□□ -1.38
ATG4A-202ENST00000345734 MRPS36P82909 103 aaKnown RBP6.45□□□□□ -1.38
ATG4A-202ENST00000345734 LINC00526Q96FQ7 95 aa6.45□□□□□ -1.38
ATG4A-202ENST00000345734 TIMM21Q9BVV7 248 aa6.45□□□□□ -1.38
ATG4A-202ENST00000345734 A0A0A0MQY5 61 aa6.44□□□□□ -1.38
ATG4A-202ENST00000345734 MIFP14174 115 aa6.44□□□□□ -1.38
ATG4A-202ENST00000345734 PLEKHB2Q96CS7 222 aa6.44□□□□□ -1.38
ATG4A-202ENST00000345734 TMEM243Q9BU79 118 aa6.44□□□□□ -1.38
ATG4A-202ENST00000345734 HUWE1Q7Z6Z7 4374 aaKnown RBP6.44□□□□□ -1.38
ATG4A-202ENST00000345734 UBE2D1P51668 147 aa6.44□□□□□ -1.38
ATG4A-202ENST00000345734 C10orf126Q8N4M7 172 aa6.44□□□□□ -1.38
ATG4A-202ENST00000345734 RETNQ9HD89 108 aa6.44□□□□□ -1.38
ATG4A-202ENST00000345734 UBE2L6O14933 153 aa6.43□□□□□ -1.38
ATG4A-202ENST00000345734 DAD1P61803 113 aa6.43□□□□□ -1.38
ATG4A-202ENST00000345734 ANKRD29Q8N6D5 301 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms