RNA–Protein interactions for RNA: ENST00000341247.8

LIMA1-201, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMA1, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-201ENST00000341247 IGLV4-60A0A075B6I1 120 aa7.3□□□□□ -1.24
LIMA1-201ENST00000341247 FHL2Q14192 279 aa7.3□□□□□ -1.24
LIMA1-201ENST00000341247 MEIG1Q5JSS6 88 aa7.3□□□□□ -1.24
LIMA1-201ENST00000341247 TIRAPP58753 221 aa7.3□□□□□ -1.24
LIMA1-201ENST00000341247 C9JAW5 83 aa7.3□□□□□ -1.24
LIMA1-201ENST00000341247 DEFB135Q30KP9 77 aa7.3□□□□□ -1.24
LIMA1-201ENST00000341247 LYRM7Q5U5X0 104 aa7.3□□□□□ -1.24
LIMA1-201ENST00000341247 CLPSL2Q6UWE3 100 aa7.3□□□□□ -1.24
LIMA1-201ENST00000341247 PRIMA1Q86XR5 153 aa7.3□□□□□ -1.24
LIMA1-201ENST00000341247 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.29□□□□□ -1.24
LIMA1-201ENST00000341247 SMIM1B2RUZ4 78 aa7.29□□□□□ -1.24
LIMA1-201ENST00000341247 MIAQ16674 131 aa7.29□□□□□ -1.24
LIMA1-201ENST00000341247 TMEM262E9PQX1 116 aa7.29□□□□□ -1.24
LIMA1-201ENST00000341247 SBSPONQ8IVN8 264 aa7.29□□□□□ -1.24
LIMA1-201ENST00000341247 A0A0B4J2C4 111 aa7.28□□□□□ -1.24
LIMA1-201ENST00000341247 TRBV6-4A0A1B0GX49 114 aa7.28□□□□□ -1.24
LIMA1-201ENST00000341247 TRIAP1O43715 76 aa7.28□□□□□ -1.24
LIMA1-201ENST00000341247 GYPEP15421 78 aa7.28□□□□□ -1.24
LIMA1-201ENST00000341247 OVOL2Q9BRP0 275 aa7.28□□□□□ -1.24
LIMA1-201ENST00000341247 C11orf68Q9H3H3 251 aaKnown RBP7.28□□□□□ -1.24
LIMA1-201ENST00000341247 F8P00451 2351 aa7.28□□□□□ -1.24
LIMA1-201ENST00000341247 J3QR89 54 aa7.28□□□□□ -1.24
LIMA1-201ENST00000341247 IGLV5-45A0A087WSX0 123 aa7.27□□□□□ -1.25
LIMA1-201ENST00000341247 NDUFA1O15239 70 aa7.27□□□□□ -1.25
LIMA1-201ENST00000341247 FAM110AQ9BQ89 295 aa7.27□□□□□ -1.25
LIMA1-201ENST00000341247 SMAGPQ0VAQ4 97 aa7.27□□□□□ -1.25
LIMA1-201ENST00000341247 CIRBPQ14011 172 aaKnown RBP7.27□□□□□ -1.25
LIMA1-201ENST00000341247 C5orf38Q86SI9 138 aa7.27□□□□□ -1.25
LIMA1-201ENST00000341247 CLEC2BQ92478 149 aa7.27□□□□□ -1.25
LIMA1-201ENST00000341247 TRBV6-8A0A0A6YYG3 113 aa7.27□□□□□ -1.25
LIMA1-201ENST00000341247 RPL13AP40429 203 aaKnown RBP7.27□□□□□ -1.25
LIMA1-201ENST00000341247 TRBV20-1A0A075B6N2 111 aa7.26□□□□□ -1.25
LIMA1-201ENST00000341247 FOXI1Q12951 378 aa7.26□□□□□ -1.25
LIMA1-201ENST00000341247 FAM222AQ5U5X8 452 aa7.26□□□□□ -1.25
LIMA1-201ENST00000341247 SPANXDQ9BXN6 97 aa7.26□□□□□ -1.25
LIMA1-201ENST00000341247 SPANXCQ9NY87 97 aa7.26□□□□□ -1.25
LIMA1-201ENST00000341247 GAGE12HA6NDE8 117 aa7.26□□□□□ -1.25
LIMA1-201ENST00000341247 ANKRD29Q8N6D5 301 aa7.26□□□□□ -1.25
LIMA1-201ENST00000341247 STAB1Q9NY15 2570 aa7.26□□□□□ -1.25
LIMA1-201ENST00000341247 IGLV5-39A0A0G2JS06 123 aa7.26□□□□□ -1.25
LIMA1-201ENST00000341247 SLC25A20O43772 301 aa7.26□□□□□ -1.25
LIMA1-201ENST00000341247 X6R8D5 127 aa7.26□□□□□ -1.25
LIMA1-201ENST00000341247 F5H768 121 aa7.25□□□□□ -1.25
LIMA1-201ENST00000341247 HTN3P15516 51 aa7.25□□□□□ -1.25
LIMA1-201ENST00000341247 CSDC2Q9Y534 153 aaKnown RBP7.25□□□□□ -1.25
LIMA1-201ENST00000341247 ICOSQ9Y6W8 199 aa7.25□□□□□ -1.25
LIMA1-201ENST00000341247 SOSTDC1Q6X4U4 206 aa7.25□□□□□ -1.25
LIMA1-201ENST00000341247 LINC00308Q8TCZ7 52 aa7.25□□□□□ -1.25
LIMA1-201ENST00000341247 CARD19Q96LW7 228 aa7.25□□□□□ -1.25
LIMA1-201ENST00000341247 ATP6V0E2Q8NHE4 81 aa7.24□□□□□ -1.25
LIMA1-201ENST00000341247 XCL1P47992 114 aa7.24□□□□□ -1.25
LIMA1-201ENST00000341247 Q8N3U1 123 aa7.24□□□□□ -1.25
LIMA1-201ENST00000341247 TEN1Q86WV5 123 aa7.23□□□□□ -1.25
LIMA1-201ENST00000341247 ATXN8Q156A1 80 aa7.23□□□□□ -1.25
LIMA1-201ENST00000341247 LINC01620Q4KN68 170 aa7.23□□□□□ -1.25
LIMA1-201ENST00000341247 C9orf66Q5T8R8 295 aa7.23□□□□□ -1.25
LIMA1-201ENST00000341247 PFN2P35080 140 aa7.23□□□□□ -1.25
LIMA1-201ENST00000341247 SIGMAR1Q99720 223 aa7.22□□□□□ -1.25
LIMA1-201ENST00000341247 PAX4O43316 350 aa7.22□□□□□ -1.25
LIMA1-201ENST00000341247 NTN5Q8WTR8 489 aaPredicted RBP7.22□□□□□ -1.25
LIMA1-201ENST00000341247 IGLV10-54A0A075B6I4 117 aa7.22□□□□□ -1.25
LIMA1-201ENST00000341247 COX7B2Q8TF08 81 aa7.22□□□□□ -1.25
LIMA1-201ENST00000341247 TENM3Q9P273 2699 aa7.21□□□□□ -1.25
LIMA1-201ENST00000341247 LYSTQ99698 3801 aa7.21□□□□□ -1.25
LIMA1-201ENST00000341247 TRBV30A0A0K0K1B3 111 aa7.21□□□□□ -1.25
LIMA1-201ENST00000341247 COX6CP09669 75 aa7.21□□□□□ -1.25
LIMA1-201ENST00000341247 LINC00158P58513 81 aa7.21□□□□□ -1.25
LIMA1-201ENST00000341247 PPDPFLQ8WWR9 84 aa7.21□□□□□ -1.25
LIMA1-201ENST00000341247 DNAH3Q8TD57 4116 aa7.21□□□□□ -1.26
LIMA1-201ENST00000341247 IGHV4-28A0A0C4DH34 117 aa7.21□□□□□ -1.26
LIMA1-201ENST00000341247 CELA1Q9UNI1 258 aa7.21□□□□□ -1.26
LIMA1-201ENST00000341247 TIMM17BO60830 172 aa7.21□□□□□ -1.26
LIMA1-201ENST00000341247 IFITM1P13164 125 aa7.21□□□□□ -1.26
LIMA1-201ENST00000341247 MIR7-3HGQ8N6C7 128 aa7.21□□□□□ -1.26
LIMA1-201ENST00000341247 KIR2DL5BQ8NHK3 375 aa7.21□□□□□ -1.26
LIMA1-201ENST00000341247 TEX49A0A1B0GTD5 131 aa7.2□□□□□ -1.26
LIMA1-201ENST00000341247 PRO0255Q9UI72 69 aa7.2□□□□□ -1.26
LIMA1-201ENST00000341247 DAD1P61803 113 aa7.19□□□□□ -1.26
LIMA1-201ENST00000341247 LINC00959A0A1B0GUT2 108 aa7.19□□□□□ -1.26
LIMA1-201ENST00000341247 CIDEAO60543 219 aa7.19□□□□□ -1.26
LIMA1-201ENST00000341247 C2orf82Q6UX34 121 aa7.19□□□□□ -1.26
LIMA1-201ENST00000341247 TRAV26-1A0A087WT03 109 aa7.19□□□□□ -1.26
LIMA1-201ENST00000341247 IGHV3OR16-9A0A0B4J2B5 98 aa7.19□□□□□ -1.26
LIMA1-201ENST00000341247 FAM19A3Q7Z5A8 133 aa7.19□□□□□ -1.26
LIMA1-201ENST00000341247 H7C423 109 aa7.18□□□□□ -1.26
LIMA1-201ENST00000341247 C6orf226Q5I0X4 101 aa7.18□□□□□ -1.26
LIMA1-201ENST00000341247 LINC00269Q8N2A0 174 aa7.18□□□□□ -1.26
LIMA1-201ENST00000341247 OXLD1Q5BKU9 147 aa7.17□□□□□ -1.26
LIMA1-201ENST00000341247 SPATA25Q9BR10 227 aa7.17□□□□□ -1.26
LIMA1-201ENST00000341247 CDIP1Q9H305 208 aa7.17□□□□□ -1.26
LIMA1-201ENST00000341247 MT-ATP8P03928 68 aa7.17□□□□□ -1.26
LIMA1-201ENST00000341247 ANGP03950 147 aaKnown RBP7.17□□□□□ -1.26
LIMA1-201ENST00000341247 HERV-K104P63124 156 aa7.17□□□□□ -1.26
LIMA1-201ENST00000341247 LINC00612Q8N6U2 182 aa7.17□□□□□ -1.26
LIMA1-201ENST00000341247 TRBV10-2A0A0K0K1G8 114 aa7.16□□□□□ -1.26
LIMA1-201ENST00000341247 IGHV4-30-4P0DP06 118 aa7.16□□□□□ -1.26
LIMA1-201ENST00000341247 APOC4P55056 127 aa7.16□□□□□ -1.26
LIMA1-201ENST00000341247 CITED1Q99966 193 aa7.16□□□□□ -1.26
LIMA1-201ENST00000341247 MAST4O15021 2626 aa7.16□□□□□ -1.26
LIMA1-201ENST00000341247 SMIM9A6NGZ8 99 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms