RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 COX7A2LO14548 114 aa10.11□□□□□ -0.79
SEC13-201ENST00000337354 COA6Q5JTJ3 125 aaKnown RBP10.11□□□□□ -0.79
SEC13-201ENST00000337354 ZC2HC1BQ5TFG8 222 aa10.11□□□□□ -0.79
SEC13-201ENST00000337354 CDPF1Q6NVV7 123 aa10.11□□□□□ -0.79
SEC13-201ENST00000337354 SPATA12Q7Z6I5 190 aa10.11□□□□□ -0.79
SEC13-201ENST00000337354 FAT2Q9NYQ8 4349 aa10.11□□□□□ -0.79
SEC13-201ENST00000337354 NUPR1O60356 82 aa10.1□□□□□ -0.79
SEC13-201ENST00000337354 LEPROTL1O95214 131 aa10.1□□□□□ -0.79
SEC13-201ENST00000337354 MALP21145 153 aa10.1□□□□□ -0.79
SEC13-201ENST00000337354 IGHV1-58A0A0C4DH39 117 aa10.09□□□□□ -0.79
SEC13-201ENST00000337354 APOMO95445 188 aa10.09□□□□□ -0.79
SEC13-201ENST00000337354 HERVK_113P63121 156 aa10.09□□□□□ -0.79
SEC13-201ENST00000337354 IFI27L1Q96BM0 104 aa10.09□□□□□ -0.79
SEC13-201ENST00000337354 PRSS1P07477 247 aa10.08□□□□□ -0.8
SEC13-201ENST00000337354 C5orf38Q86SI9 138 aa10.08□□□□□ -0.8
SEC13-201ENST00000337354 GEMIN7Q9H840 131 aaKnown RBP10.08□□□□□ -0.8
SEC13-201ENST00000337354 HSPB8Q9UJY1 196 aa10.08□□□□□ -0.8
SEC13-201ENST00000337354 A0A087WZ39 114 aa10.07□□□□□ -0.8
SEC13-201ENST00000337354 TINCRA0A1B0GVN0 87 aa10.07□□□□□ -0.8
SEC13-201ENST00000337354 NDUFA6P56556 154 aa10.07□□□□□ -0.8
SEC13-201ENST00000337354 KRTAP10-2P60368 255 aa10.07□□□□□ -0.8
SEC13-201ENST00000337354 COX6A2Q02221 97 aa10.07□□□□□ -0.8
SEC13-201ENST00000337354 LINC01561Q8N1V8 128 aa10.07□□□□□ -0.8
SEC13-201ENST00000337354 C15orf56Q8N910 161 aa10.07□□□□□ -0.8
SEC13-201ENST00000337354 TRAV12-1A0A0B4J245 112 aa10.06□□□□□ -0.8
SEC13-201ENST00000337354 hDV102S1A0JD36 115 aa10.06□□□□□ -0.8
SEC13-201ENST00000337354 PACRGQ96M98 296 aaPredicted RBP10.06□□□□□ -0.8
SEC13-201ENST00000337354 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.05□□□□□ -0.8
SEC13-201ENST00000337354 GVQW2A0A096LPI5 108 aaPredicted RBP10.05□□□□□ -0.8
SEC13-201ENST00000337354 IGLV5-52A0A0A0MRZ9 124 aa10.05□□□□□ -0.8
SEC13-201ENST00000337354 A0A0J9YXV3 536 aa10.05□□□□□ -0.8
SEC13-201ENST00000337354 C16orf90A8MZG2 172 aa10.04□□□□□ -0.8
SEC13-201ENST00000337354 OR10D4PQ8NGN7 298 aa10.04□□□□□ -0.8
SEC13-201ENST00000337354 IGHV3-64A0A075B6Q5 118 aa10.03□□□□□ -0.8
SEC13-201ENST00000337354 IGLV5-45A0A087WSX0 123 aa10.03□□□□□ -0.8
SEC13-201ENST00000337354 ZNF561-AS1K7EIQ3 104 aa10.03□□□□□ -0.8
SEC13-201ENST00000337354 IGLC3P0DOY3 106 aa10.03□□□□□ -0.8
SEC13-201ENST00000337354 FABP4P15090 132 aa10.03□□□□□ -0.8
SEC13-201ENST00000337354 CNBPP62633 177 aaKnown RBP10.03□□□□□ -0.8
SEC13-201ENST00000337354 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.02□□□□□ -0.8
SEC13-201ENST00000337354 HIGD2BQ4VC39 106 aa10.02□□□□□ -0.8
SEC13-201ENST00000337354 CDKN2A-AS1Q9UH64 79 aa10.02□□□□□ -0.8
SEC13-201ENST00000337354 CHTOPQ9Y3Y2 248 aaKnown RBP10.02□□□□□ -0.8
SEC13-201ENST00000337354 PKD1P98161 4303 aa10.02□□□□□ -0.81
SEC13-201ENST00000337354 PKHD1P08F94 4074 aa10.02□□□□□ -0.81
SEC13-201ENST00000337354 GCSHP23434 173 aa10.01□□□□□ -0.81
SEC13-201ENST00000337354 LINC00469Q8N7U9 141 aa10.01□□□□□ -0.81
SEC13-201ENST00000337354 MAP1LC3CQ9BXW4 147 aa10.01□□□□□ -0.81
SEC13-201ENST00000337354 F8WDY8 70 aa10.01□□□□□ -0.81
SEC13-201ENST00000337354 H3BRM9 83 aa10.01□□□□□ -0.81
SEC13-201ENST00000337354 ORAOV1Q8WV07 137 aa10.01□□□□□ -0.81
SEC13-201ENST00000337354 IGLV4-69A0A075B6H9 119 aa10□□□□□ -0.81
SEC13-201ENST00000337354 F8VRH5 84 aa10□□□□□ -0.81
SEC13-201ENST00000337354 S100A6P06703 90 aa10□□□□□ -0.81
SEC13-201ENST00000337354 FUSP35637 526 aaKnown RBP eCLIP10□□□□□ -0.81
SEC13-201ENST00000337354 C9orf163Q8N9P6 203 aa10□□□□□ -0.81
SEC13-201ENST00000337354 C2orf48Q96LS8 159 aa10□□□□□ -0.81
SEC13-201ENST00000337354 CHAC1Q9BUX1 264 aa10□□□□□ -0.81
SEC13-201ENST00000337354 SLPIP03973 132 aa9.99□□□□□ -0.81
SEC13-201ENST00000337354 SPAG11BQ08648 103 aa9.99□□□□□ -0.81
SEC13-201ENST00000337354 MRPL35Q9NZE8 188 aaKnown RBP9.98□□□□□ -0.81
SEC13-201ENST00000337354 DNAH11Q96DT5 4516 aa9.97□□□□□ -0.81
SEC13-201ENST00000337354 DYNC1H1Q14204 4646 aaKnown RBP9.97□□□□□ -0.81
SEC13-201ENST00000337354 SYCNQ0VAF6 134 aa9.97□□□□□ -0.81
SEC13-201ENST00000337354 ODF1Q14990 250 aa9.97□□□□□ -0.81
SEC13-201ENST00000337354 C11orf86A6NJI1 115 aa9.96□□□□□ -0.82
SEC13-201ENST00000337354 H0Y8G0 127 aa9.96□□□□□ -0.82
SEC13-201ENST00000337354 PRSS2P07478 247 aa9.96□□□□□ -0.82
SEC13-201ENST00000337354 ZNF22P17026 224 aaPredicted RBP9.96□□□□□ -0.82
SEC13-201ENST00000337354 KIAA0087Q14695 138 aa9.96□□□□□ -0.82
SEC13-201ENST00000337354 Q8IZM0 81 aa9.96□□□□□ -0.82
SEC13-201ENST00000337354 LINC00526Q96FQ7 95 aa9.96□□□□□ -0.82
SEC13-201ENST00000337354 CAMK2N2Q96S95 79 aa9.96□□□□□ -0.82
SEC13-201ENST00000337354 KIAA1109Q2LD37 5005 aa9.95□□□□□ -0.82
SEC13-201ENST00000337354 SMIM1B2RUZ4 78 aa9.95□□□□□ -0.82
SEC13-201ENST00000337354 SYS1-DBNDD2H3BUS1 97 aa9.95□□□□□ -0.82
SEC13-201ENST00000337354 C6orf226Q5I0X4 101 aa9.95□□□□□ -0.82
SEC13-201ENST00000337354 TMEM170BQ5T4T1 132 aa9.95□□□□□ -0.82
SEC13-201ENST00000337354 PLNP26678 52 aa9.94□□□□□ -0.82
SEC13-201ENST00000337354 S100A2P29034 98 aa9.94□□□□□ -0.82
SEC13-201ENST00000337354 KRTAP10-1P60331 282 aa9.94□□□□□ -0.82
SEC13-201ENST00000337354 PET117Q6UWS5 81 aa9.94□□□□□ -0.82
SEC13-201ENST00000337354 CARD19Q96LW7 228 aa9.94□□□□□ -0.82
SEC13-201ENST00000337354 PKIGQ9Y2B9 76 aa9.94□□□□□ -0.82
SEC13-201ENST00000337354 NDUFA1O15239 70 aa9.93□□□□□ -0.82
SEC13-201ENST00000337354 SPINK8P0C7L1 97 aa9.93□□□□□ -0.82
SEC13-201ENST00000337354 RNF151Q2KHN1 245 aa9.93□□□□□ -0.82
SEC13-201ENST00000337354 HIST3H2BBQ8N257 126 aa9.93□□□□□ -0.82
SEC13-201ENST00000337354 TOMM7Q9P0U1 55 aa9.93□□□□□ -0.82
SEC13-201ENST00000337354 IGLV5-39A0A0G2JS06 123 aa9.92□□□□□ -0.82
SEC13-201ENST00000337354 DPM2O94777 84 aa9.92□□□□□ -0.82
SEC13-201ENST00000337354 CXCL5P42830 114 aa9.92□□□□□ -0.82
SEC13-201ENST00000337354 CKS1BP61024 79 aa9.92□□□□□ -0.82
SEC13-201ENST00000337354 SDIM1Q6ZPB5 146 aa9.92□□□□□ -0.82
SEC13-201ENST00000337354 Q6ZRU5 148 aa9.92□□□□□ -0.82
SEC13-201ENST00000337354 C5orf52A6NGY3 159 aa9.91□□□□□ -0.82
SEC13-201ENST00000337354 SNRPEP62304 92 aaKnown RBP9.91□□□□□ -0.82
SEC13-201ENST00000337354 LINC01620Q4KN68 170 aa9.91□□□□□ -0.82
SEC13-201ENST00000337354 COX7B2Q8TF08 81 aa9.91□□□□□ -0.82
SEC13-201ENST00000337354 HERC2O95714 4834 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms