RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 ACANP16112 2415 aa12.71□□□□□ -0.38
IFFO1-201ENST00000336604 TRAV25A0A0B4J276 109 aa12.71□□□□□ -0.38
IFFO1-201ENST00000336604 HERVK_113P63121 156 aa12.71□□□□□ -0.38
IFFO1-201ENST00000336604 TMEM86BQ8N661 226 aa12.7□□□□□ -0.38
IFFO1-201ENST00000336604 LINC01600Q96MT4 127 aa12.7□□□□□ -0.38
IFFO1-201ENST00000336604 NOP10Q9NPE3 64 aaKnown RBP12.7□□□□□ -0.38
IFFO1-201ENST00000336604 YAE1D1Q9NRH1 226 aa12.7□□□□□ -0.38
IFFO1-201ENST00000336604 IGLV5-39A0A0G2JS06 123 aa12.7□□□□□ -0.38
IFFO1-201ENST00000336604 LST1O00453 97 aa12.7□□□□□ -0.38
IFFO1-201ENST00000336604 TIMM17BO60830 172 aa12.7□□□□□ -0.38
IFFO1-201ENST00000336604 CITED2Q99967 270 aaPredicted RBP12.7□□□□□ -0.38
IFFO1-201ENST00000336604 WFDC10AQ9H1F0 79 aa12.7□□□□□ -0.38
IFFO1-201ENST00000336604 FAM236AA0A1B0GUQ0 79 aa12.69□□□□□ -0.38
IFFO1-201ENST00000336604 FAM236BA0A1B0GV22 79 aa12.69□□□□□ -0.38
IFFO1-201ENST00000336604 SMIM1B2RUZ4 78 aa12.68□□□□□ -0.38
IFFO1-201ENST00000336604 TRBV10-1A0A0K0K1A3 114 aa12.67□□□□□ -0.38
IFFO1-201ENST00000336604 CIRBPQ14011 172 aaKnown RBP12.67□□□□□ -0.38
IFFO1-201ENST00000336604 GIG44P09565 113 aaPredicted RBP12.67□□□□□ -0.38
IFFO1-201ENST00000336604 DAZ2Q13117 558 aaKnown RBP12.67□□□□□ -0.38
IFFO1-201ENST00000336604 DAZ4Q86SG3 579 aaKnown RBP12.67□□□□□ -0.38
IFFO1-201ENST00000336604 DAZ3Q9NR90 486 aaKnown RBP12.67□□□□□ -0.38
IFFO1-201ENST00000336604 LINC00308Q8TCZ7 52 aa12.66□□□□□ -0.38
IFFO1-201ENST00000336604 TENM4Q6N022 2769 aa12.66□□□□□ -0.38
IFFO1-201ENST00000336604 CDC42SE2Q9NRR3 84 aa12.66□□□□□ -0.38
IFFO1-201ENST00000336604 MRPL23Q16540 153 aaKnown RBP12.65□□□□□ -0.38
IFFO1-201ENST00000336604 CSDC2Q9Y534 153 aaKnown RBP12.65□□□□□ -0.38
IFFO1-201ENST00000336604 FAM240AA0A1B0GVK7 77 aa12.65□□□□□ -0.38
IFFO1-201ENST00000336604 LOC100131303A0A0U1RQF7 123 aa12.64□□□□□ -0.39
IFFO1-201ENST00000336604 SOSTDC1Q6X4U4 206 aa12.64□□□□□ -0.39
IFFO1-201ENST00000336604 RPL35AP18077 110 aaKnown RBP12.64□□□□□ -0.39
IFFO1-201ENST00000336604 PRIMA1Q86XR5 153 aa12.64□□□□□ -0.39
IFFO1-201ENST00000336604 TRGV2A0A075B6R0 118 aa12.63□□□□□ -0.39
IFFO1-201ENST00000336604 TRBV7-7A0A0K0K1E9 115 aa12.63□□□□□ -0.39
IFFO1-201ENST00000336604 PLAC8L1A1L4L8 177 aa12.63□□□□□ -0.39
IFFO1-201ENST00000336604 PLA2G2AP14555 144 aa12.63□□□□□ -0.39
IFFO1-201ENST00000336604 HIST2H2BCQ6DN03 193 aa12.63□□□□□ -0.39
IFFO1-201ENST00000336604 FAM19A3Q7Z5A8 133 aa12.63□□□□□ -0.39
IFFO1-201ENST00000336604 F5H768 121 aa12.63□□□□□ -0.39
IFFO1-201ENST00000336604 PPDPFQ9H3Y8 114 aa12.63□□□□□ -0.39
IFFO1-201ENST00000336604 DEFB121Q5J5C9 76 aa12.62□□□□□ -0.39
IFFO1-201ENST00000336604 LINC01006Q8NI28 216 aa12.62□□□□□ -0.39
IFFO1-201ENST00000336604 SMCR5Q8TEV8 140 aa12.62□□□□□ -0.39
IFFO1-201ENST00000336604 UBE2L6O14933 153 aa12.61□□□□□ -0.39
IFFO1-201ENST00000336604 ANK3Q12955 4377 aaKnown RBP12.6□□□□□ -0.39
IFFO1-201ENST00000336604 TMEM243Q9BU79 118 aa12.6□□□□□ -0.39
IFFO1-201ENST00000336604 ITPR2Q14571 2701 aa12.59□□□□□ -0.39
IFFO1-201ENST00000336604 C9orf153Q5TBE3 101 aa12.59□□□□□ -0.39
IFFO1-201ENST00000336604 C16orf74Q96GX8 76 aa12.59□□□□□ -0.39
IFFO1-201ENST00000336604 IGKV3OR2-268A0A0C4DH90 116 aa12.58□□□□□ -0.4
IFFO1-201ENST00000336604 TMEM126AQ9H061 195 aa12.58□□□□□ -0.4
IFFO1-201ENST00000336604 PDZD2O15018 2839 aa12.58□□□□□ -0.4
IFFO1-201ENST00000336604 C19orf73Q9NVV2 129 aa12.57□□□□□ -0.4
IFFO1-201ENST00000336604 TRGV4A0A0C4DH28 118 aa12.55□□□□□ -0.4
IFFO1-201ENST00000336604 IGLV1-51P01701 117 aa12.55□□□□□ -0.4
IFFO1-201ENST00000336604 CSNK1G2-AS1Q8NCQ2 148 aa12.55□□□□□ -0.4
IFFO1-201ENST00000336604 FN1P02751 2386 aaKnown RBP12.55□□□□□ -0.4
IFFO1-201ENST00000336604 KLK5Q9Y337 293 aaPredicted RBP12.55□□□□□ -0.4
IFFO1-201ENST00000336604 NBEAL2Q6ZNJ1 2754 aa12.54□□□□□ -0.4
IFFO1-201ENST00000336604 TRBV6-4A0A1B0GX49 114 aa12.54□□□□□ -0.4
IFFO1-201ENST00000336604 KRTAP1-1Q07627 177 aa12.54□□□□□ -0.4
IFFO1-201ENST00000336604 COX7A2LO14548 114 aa12.54□□□□□ -0.4
IFFO1-201ENST00000336604 GCN1Q92616 2671 aaKnown RBP12.53□□□□□ -0.4
IFFO1-201ENST00000336604 IGLV4-60A0A075B6I1 120 aa12.53□□□□□ -0.4
IFFO1-201ENST00000336604 LOC107984640A0A0U1RRK4 108 aa12.53□□□□□ -0.4
IFFO1-201ENST00000336604 ACYP1P07311 99 aa12.53□□□□□ -0.4
IFFO1-201ENST00000336604 C3orf22Q8N5N4 141 aa12.53□□□□□ -0.4
IFFO1-201ENST00000336604 COPS9Q8WXC6 57 aa12.53□□□□□ -0.4
IFFO1-201ENST00000336604 TOMM7Q9P0U1 55 aa12.53□□□□□ -0.4
IFFO1-201ENST00000336604 BAALC-AS2P0C853 105 aa12.52□□□□□ -0.41
IFFO1-201ENST00000336604 LINC00643Q86TS7 51 aa12.52□□□□□ -0.41
IFFO1-201ENST00000336604 OVOL2Q9BRP0 275 aa12.52□□□□□ -0.41
IFFO1-201ENST00000336604 RNASE1P07998 156 aaKnown RBP12.51□□□□□ -0.41
IFFO1-201ENST00000336604 CMC4P56277 68 aaPredicted RBP12.51□□□□□ -0.41
IFFO1-201ENST00000336604 IMUPQ9GZP8 106 aa12.51□□□□□ -0.41
IFFO1-201ENST00000336604 GAGE2AQ6NT46 116 aa12.51□□□□□ -0.41
IFFO1-201ENST00000336604 FHL2Q14192 279 aa12.5□□□□□ -0.41
IFFO1-201ENST00000336604 TRBV6-8A0A0A6YYG3 113 aa12.5□□□□□ -0.41
IFFO1-201ENST00000336604 COX7B2Q8TF08 81 aa12.5□□□□□ -0.41
IFFO1-201ENST00000336604 C16orf95Q9H693 158 aa12.5□□□□□ -0.41
IFFO1-201ENST00000336604 Q9HAA7 133 aa12.5□□□□□ -0.41
IFFO1-201ENST00000336604 MIR7-3HGQ8N6C7 128 aa12.49□□□□□ -0.41
IFFO1-201ENST00000336604 FAM218AQ96MZ4 157 aa12.49□□□□□ -0.41
IFFO1-201ENST00000336604 DEFB130BP0DP73 79 aa12.48□□□□□ -0.41
IFFO1-201ENST00000336604 DEFB130AP0DP74 79 aa12.48□□□□□ -0.41
IFFO1-201ENST00000336604 UQCRQO14949 82 aa12.47□□□□□ -0.41
IFFO1-201ENST00000336604 VWFP04275 2813 aa12.47□□□□□ -0.41
IFFO1-201ENST00000336604 IGHV3OR16-9A0A0B4J2B5 98 aa12.46□□□□□ -0.41
IFFO1-201ENST00000336604 LINC00337Q8N6G1 96 aa12.46□□□□□ -0.41
IFFO1-201ENST00000336604 C5orf38Q86SI9 138 aa12.45□□□□□ -0.42
IFFO1-201ENST00000336604 C22orf24Q9Y442 160 aa12.45□□□□□ -0.42
IFFO1-201ENST00000336604 IGKV2-28A0A075B6P5 120 aa12.45□□□□□ -0.42
IFFO1-201ENST00000336604 IGKV2D-28P01615 120 aa12.45□□□□□ -0.42
IFFO1-201ENST00000336604 LINC00158P58513 81 aa12.45□□□□□ -0.42
IFFO1-201ENST00000336604 LINC00526Q96FQ7 95 aa12.45□□□□□ -0.42
IFFO1-201ENST00000336604 SND1-IT1Q9HBX3 110 aa12.45□□□□□ -0.42
IFFO1-201ENST00000336604 CRPP02741 224 aa12.43□□□□□ -0.42
IFFO1-201ENST00000336604 UNC79Q9P2D8 2635 aa12.43□□□□□ -0.42
IFFO1-201ENST00000336604 SDIM1Q6ZPB5 146 aa12.43□□□□□ -0.42
IFFO1-201ENST00000336604 TRAV13-2A0A0B4J235 113 aa12.42□□□□□ -0.42
IFFO1-201ENST00000336604 TRACP01848 142 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms