RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.95□□□□□ -0.82
SYNE3-201ENST00000334258 HIVEP2P31629 2446 aa9.95□□□□□ -0.82
SYNE3-201ENST00000334258 RPL35AP18077 110 aaKnown RBP9.95□□□□□ -0.82
SYNE3-201ENST00000334258 SMCR5Q8TEV8 140 aa9.95□□□□□ -0.82
SYNE3-201ENST00000334258 IMUPQ9GZP8 106 aa9.95□□□□□ -0.82
SYNE3-201ENST00000334258 MRAPQ8TCY5 172 aa9.94□□□□□ -0.82
SYNE3-201ENST00000334258 PSMB8P28062 276 aa9.94□□□□□ -0.82
SYNE3-201ENST00000334258 HOXD3P31249 432 aaPredicted RBP9.93□□□□□ -0.82
SYNE3-201ENST00000334258 ZNF415Q09FC8 603 aa9.93□□□□□ -0.82
SYNE3-201ENST00000334258 COPS9Q8WXC6 57 aa9.93□□□□□ -0.82
SYNE3-201ENST00000334258 Q9HAA7 133 aa9.93□□□□□ -0.82
SYNE3-201ENST00000334258 KMT2BQ9UMN6 2715 aaPredicted RBP9.93□□□□□ -0.82
SYNE3-201ENST00000334258 OTOGQ6ZRI0 2925 aa9.92□□□□□ -0.82
SYNE3-201ENST00000334258 IGHV4-59P01825 116 aa9.92□□□□□ -0.82
SYNE3-201ENST00000334258 DPH3Q96FX2 82 aa9.92□□□□□ -0.82
SYNE3-201ENST00000334258 RS1O15537 224 aa9.92□□□□□ -0.82
SYNE3-201ENST00000334258 TIRAPP58753 221 aa9.92□□□□□ -0.82
SYNE3-201ENST00000334258 CFHR3Q02985 330 aa9.92□□□□□ -0.82
SYNE3-201ENST00000334258 Q5XG85 94 aa9.92□□□□□ -0.82
SYNE3-201ENST00000334258 RPS28P62857 69 aaKnown RBP9.91□□□□□ -0.82
SYNE3-201ENST00000334258 SOSTDC1Q6X4U4 206 aa9.91□□□□□ -0.82
SYNE3-201ENST00000334258 TEP1Q99973 2627 aaKnown RBP9.91□□□□□ -0.82
SYNE3-201ENST00000334258 IGHV3OR16-12A0A075B7B8 117 aa9.91□□□□□ -0.82
SYNE3-201ENST00000334258 PIK3CD-AS1Q5SR53 167 aa9.91□□□□□ -0.82
SYNE3-201ENST00000334258 PDZD2O15018 2839 aa9.9□□□□□ -0.82
SYNE3-201ENST00000334258 SEC61GP60059 68 aa9.9□□□□□ -0.82
SYNE3-201ENST00000334258 Q96MF0 132 aa9.9□□□□□ -0.82
SYNE3-201ENST00000334258 LINC00242Q5T6M2 205 aa9.9□□□□□ -0.82
SYNE3-201ENST00000334258 TRACP01848 142 aa9.9□□□□□ -0.83
SYNE3-201ENST00000334258 COX7CP15954 63 aa9.9□□□□□ -0.83
SYNE3-201ENST00000334258 DEFB112Q30KQ8 113 aa9.9□□□□□ -0.83
SYNE3-201ENST00000334258 B4DSR2 109 aa9.89□□□□□ -0.83
SYNE3-201ENST00000334258 IGHV3-53P01767 116 aa9.89□□□□□ -0.83
SYNE3-201ENST00000334258 INAFM2P0DMQ5 153 aa9.89□□□□□ -0.83
SYNE3-201ENST00000334258 WFDC11Q8NEX6 87 aa9.89□□□□□ -0.83
SYNE3-201ENST00000334258 SETXQ7Z333 2677 aaKnown RBP9.89□□□□□ -0.83
SYNE3-201ENST00000334258 DNAL4O96015 105 aa9.88□□□□□ -0.83
SYNE3-201ENST00000334258 FAM218AQ96MZ4 157 aa9.88□□□□□ -0.83
SYNE3-201ENST00000334258 AKAP9Q99996 3911 aa9.88□□□□□ -0.83
SYNE3-201ENST00000334258 IGLV5-45A0A087WSX0 123 aa9.87□□□□□ -0.83
SYNE3-201ENST00000334258 DEFB136Q30KP8 78 aa9.87□□□□□ -0.83
SYNE3-201ENST00000334258 LINC00336Q6ZUF6 198 aa9.87□□□□□ -0.83
SYNE3-201ENST00000334258 SMIM1B2RUZ4 78 aa9.87□□□□□ -0.83
SYNE3-201ENST00000334258 TOMM7Q9P0U1 55 aa9.87□□□□□ -0.83
SYNE3-201ENST00000334258 PEMTQ9UBM1 199 aa9.87□□□□□ -0.83
SYNE3-201ENST00000334258 CRPP02741 224 aa9.87□□□□□ -0.83
SYNE3-201ENST00000334258 C11orf44Q8N8P7 122 aa9.87□□□□□ -0.83
SYNE3-201ENST00000334258 IGLV5-39A0A0G2JS06 123 aa9.86□□□□□ -0.83
SYNE3-201ENST00000334258 IGKV3OR2-268A0A0C4DH90 116 aa9.86□□□□□ -0.83
SYNE3-201ENST00000334258 RBMY1BA6NDE4 496 aaKnown RBP9.86□□□□□ -0.83
SYNE3-201ENST00000334258 RBMY1EA6NEQ0 496 aaKnown RBP9.86□□□□□ -0.83
SYNE3-201ENST00000334258 RBMY1DP0C7P1 496 aaKnown RBP9.86□□□□□ -0.83
SYNE3-201ENST00000334258 MALP21145 153 aa9.85□□□□□ -0.83
SYNE3-201ENST00000334258 SDIM1Q6ZPB5 146 aa9.85□□□□□ -0.83
SYNE3-201ENST00000334258 TRGV1A0A0A0MS02 117 aa9.85□□□□□ -0.83
SYNE3-201ENST00000334258 SLURP1P55000 103 aa9.85□□□□□ -0.83
SYNE3-201ENST00000334258 KHDC1LQ5JSQ8 128 aa9.85□□□□□ -0.83
SYNE3-201ENST00000334258 XCL2Q9UBD3 114 aa9.85□□□□□ -0.83
SYNE3-201ENST00000334258 IGKV3D-7A0A0C4DH55 119 aa9.84□□□□□ -0.83
SYNE3-201ENST00000334258 CRYGAP11844 174 aa9.84□□□□□ -0.83
SYNE3-201ENST00000334258 ATP5G1P05496 136 aa9.84□□□□□ -0.83
SYNE3-201ENST00000334258 C2orf48Q96LS8 159 aa9.84□□□□□ -0.83
SYNE3-201ENST00000334258 C14orf132Q9NPU4 83 aa9.83□□□□□ -0.84
SYNE3-201ENST00000334258 TRAV13-2A0A0B4J235 113 aa9.83□□□□□ -0.84
SYNE3-201ENST00000334258 RPL36AP83881 106 aaKnown RBP9.83□□□□□ -0.84
SYNE3-201ENST00000334258 BEAN1Q3B7T3 259 aa9.83□□□□□ -0.84
SYNE3-201ENST00000334258 LINC01356Q8N9X3 169 aa9.83□□□□□ -0.84
SYNE3-201ENST00000334258 RPL36ALQ969Q0 106 aaKnown RBP9.83□□□□□ -0.84
SYNE3-201ENST00000334258 UBE2E2Q96LR5 201 aa9.83□□□□□ -0.84
SYNE3-201ENST00000334258 PRO0628Q9UI54 55 aa9.83□□□□□ -0.84
SYNE3-201ENST00000334258 DEFB113Q30KQ7 82 aa9.83□□□□□ -0.84
SYNE3-201ENST00000334258 CXCL5P42830 114 aa9.82□□□□□ -0.84
SYNE3-201ENST00000334258 LINC00158P58513 81 aa9.82□□□□□ -0.84
SYNE3-201ENST00000334258 MIR7-3HGQ8N6C7 128 aa9.82□□□□□ -0.84
SYNE3-201ENST00000334258 DYNLRB2Q8TF09 96 aa9.82□□□□□ -0.84
SYNE3-201ENST00000334258 A0A0U1RQV1 116 aa9.82□□□□□ -0.84
SYNE3-201ENST00000334258 INSP01308 110 aa9.82□□□□□ -0.84
SYNE3-201ENST00000334258 SND1-IT1Q9HBX3 110 aa9.82□□□□□ -0.84
SYNE3-201ENST00000334258 CR1P17927 2039 aa9.81□□□□□ -0.84
SYNE3-201ENST00000334258 FAM236DA0A1B0GTK5 79 aa9.81□□□□□ -0.84
SYNE3-201ENST00000334258 TMEM89A2RUT3 159 aa9.81□□□□□ -0.84
SYNE3-201ENST00000334258 UBE2L6O14933 153 aa9.81□□□□□ -0.84
SYNE3-201ENST00000334258 FAM236CP0DP71 79 aa9.81□□□□□ -0.84
SYNE3-201ENST00000334258 C5orf38Q86SI9 138 aa9.81□□□□□ -0.84
SYNE3-201ENST00000334258 PFN2P35080 140 aa9.81□□□□□ -0.84
SYNE3-201ENST00000334258 FAM222AQ5U5X8 452 aa9.81□□□□□ -0.84
SYNE3-201ENST00000334258 C11orf72Q8NBR9 251 aa9.81□□□□□ -0.84
SYNE3-201ENST00000334258 ATOX1O00244 68 aa9.81□□□□□ -0.84
SYNE3-201ENST00000334258 C18orf65Q6ZTR6 163 aa9.81□□□□□ -0.84
SYNE3-201ENST00000334258 SMR3AQ99954 134 aa9.8□□□□□ -0.84
SYNE3-201ENST00000334258 C22orf24Q9Y442 160 aa9.8□□□□□ -0.84
SYNE3-201ENST00000334258 IGHV4-31P0DP07 118 aa9.8□□□□□ -0.84
SYNE3-201ENST00000334258 TMEM258P61165 79 aa9.8□□□□□ -0.84
SYNE3-201ENST00000334258 LINC00337Q8N6G1 96 aa9.8□□□□□ -0.84
SYNE3-201ENST00000334258 A0A087WYN8 130 aa9.79□□□□□ -0.84
SYNE3-201ENST00000334258 ATRQ13535 2644 aa9.78□□□□□ -0.84
SYNE3-201ENST00000334258 A0A096LNT2 108 aa9.78□□□□□ -0.84
SYNE3-201ENST00000334258 RPL28P46779 137 aaKnown RBP9.78□□□□□ -0.84
SYNE3-201ENST00000334258 SMIM11BQ8TCY0 68 aa9.78□□□□□ -0.84
SYNE3-201ENST00000334258 MAP6D1Q9H9H5 199 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms