RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 NUPR1O60356 82 aa13.46□□□□□ -0.25
MRPL40-201ENST00000333130 GCSHP23434 173 aa13.46□□□□□ -0.25
MRPL40-201ENST00000333130 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.45□□□□□ -0.26
MRPL40-201ENST00000333130 FUSP35637 526 aaKnown RBP eCLIP13.45□□□□□ -0.26
MRPL40-201ENST00000333130 UBE2D1P51668 147 aa13.45□□□□□ -0.26
MRPL40-201ENST00000333130 ZC2HC1BQ5TFG8 222 aa13.45□□□□□ -0.26
MRPL40-201ENST00000333130 hDV102S1A0JD36 115 aa13.45□□□□□ -0.26
MRPL40-201ENST00000333130 ATP5LO75964 103 aa13.45□□□□□ -0.26
MRPL40-201ENST00000333130 COA6Q5JTJ3 125 aaKnown RBP13.45□□□□□ -0.26
MRPL40-201ENST00000333130 FAM19A3Q7Z5A8 133 aa13.45□□□□□ -0.26
MRPL40-201ENST00000333130 FAM19A2Q8N3H0 131 aa13.45□□□□□ -0.26
MRPL40-201ENST00000333130 MALP21145 153 aa13.44□□□□□ -0.26
MRPL40-201ENST00000333130 COX7A2LO14548 114 aa13.43□□□□□ -0.26
MRPL40-201ENST00000333130 PRSS1P07477 247 aa13.43□□□□□ -0.26
MRPL40-201ENST00000333130 LINC00242Q5T6M2 205 aa13.43□□□□□ -0.26
MRPL40-201ENST00000333130 DYNC1H1Q14204 4646 aaKnown RBP13.42□□□□□ -0.26
MRPL40-201ENST00000333130 IGHV1-58A0A0C4DH39 117 aa13.42□□□□□ -0.26
MRPL40-201ENST00000333130 CST9LQ9H4G1 147 aa13.42□□□□□ -0.26
MRPL40-201ENST00000333130 IGHV3OR16-9A0A0B4J2B5 98 aa13.41□□□□□ -0.26
MRPL40-201ENST00000333130 PMVKQ15126 192 aa13.41□□□□□ -0.26
MRPL40-201ENST00000333130 DNAH5Q8TE73 4624 aa13.4□□□□□ -0.26
MRPL40-201ENST00000333130 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.4□□□□□ -0.26
MRPL40-201ENST00000333130 APOMO95445 188 aa13.4□□□□□ -0.26
MRPL40-201ENST00000333130 C15orf56Q8N910 161 aa13.4□□□□□ -0.26
MRPL40-201ENST00000333130 IFI27L1Q96BM0 104 aa13.39□□□□□ -0.27
MRPL40-201ENST00000333130 GVQW2A0A096LPI5 108 aaPredicted RBP13.37□□□□□ -0.27
MRPL40-201ENST00000333130 CDK2AP2O75956 126 aa13.37□□□□□ -0.27
MRPL40-201ENST00000333130 LEPROTL1O95214 131 aa13.37□□□□□ -0.27
MRPL40-201ENST00000333130 SEC11AP67812 179 aa13.37□□□□□ -0.27
MRPL40-201ENST00000333130 COX6A2Q02221 97 aa13.37□□□□□ -0.27
MRPL40-201ENST00000333130 HIGD2BQ4VC39 106 aa13.37□□□□□ -0.27
MRPL40-201ENST00000333130 ZNF561-AS1K7EIQ3 104 aa13.36□□□□□ -0.27
MRPL40-201ENST00000333130 NDUFA6P56556 154 aa13.36□□□□□ -0.27
MRPL40-201ENST00000333130 CNBPP62633 177 aaKnown RBP13.36□□□□□ -0.27
MRPL40-201ENST00000333130 C5orf38Q86SI9 138 aa13.36□□□□□ -0.27
MRPL40-201ENST00000333130 KRTAP10-1P60331 282 aa13.35□□□□□ -0.27
MRPL40-201ENST00000333130 HERVK_113P63121 156 aa13.35□□□□□ -0.27
MRPL40-201ENST00000333130 HSPB8Q9UJY1 196 aa13.35□□□□□ -0.27
MRPL40-201ENST00000333130 LRP1BQ9NZR2 4599 aa13.35□□□□□ -0.27
MRPL40-201ENST00000333130 A0A087WZ39 114 aa13.34□□□□□ -0.27
MRPL40-201ENST00000333130 TRAV12-1A0A0B4J245 112 aa13.34□□□□□ -0.27
MRPL40-201ENST00000333130 A0A0J9YXV3 536 aa13.34□□□□□ -0.27
MRPL40-201ENST00000333130 TINCRA0A1B0GVN0 87 aa13.34□□□□□ -0.27
MRPL40-201ENST00000333130 PACRGQ96M98 296 aaPredicted RBP13.34□□□□□ -0.27
MRPL40-201ENST00000333130 IGLV5-45A0A087WSX0 123 aa13.33□□□□□ -0.27
MRPL40-201ENST00000333130 IGLC3P0DOY3 106 aa13.32□□□□□ -0.28
MRPL40-201ENST00000333130 LINC01561Q8N1V8 128 aa13.32□□□□□ -0.28
MRPL40-201ENST00000333130 C9orf163Q8N9P6 203 aa13.32□□□□□ -0.28
MRPL40-201ENST00000333130 GEMIN7Q9H840 131 aaKnown RBP13.32□□□□□ -0.28
MRPL40-201ENST00000333130 IGLV4-69A0A075B6H9 119 aa13.32□□□□□ -0.28
MRPL40-201ENST00000333130 FABP4P15090 132 aa13.32□□□□□ -0.28
MRPL40-201ENST00000333130 OR10D4PQ8NGN7 298 aa13.32□□□□□ -0.28
MRPL40-201ENST00000333130 CDKN2A-AS1Q9UH64 79 aa13.31□□□□□ -0.28
MRPL40-201ENST00000333130 PKIGQ9Y2B9 76 aa13.31□□□□□ -0.28
MRPL40-201ENST00000333130 IGHV3-64A0A075B6Q5 118 aa13.3□□□□□ -0.28
MRPL40-201ENST00000333130 LINC01620Q4KN68 170 aa13.3□□□□□ -0.28
MRPL40-201ENST00000333130 ORAOV1Q8WV07 137 aa13.3□□□□□ -0.28
MRPL40-201ENST00000333130 SPAG11BQ08648 103 aa13.29□□□□□ -0.28
MRPL40-201ENST00000333130 CHAC1Q9BUX1 264 aa13.29□□□□□ -0.28
MRPL40-201ENST00000333130 CARD19Q96LW7 228 aa13.28□□□□□ -0.28
MRPL40-201ENST00000333130 CHTOPQ9Y3Y2 248 aaKnown RBP13.28□□□□□ -0.28
MRPL40-201ENST00000333130 ODF1Q14990 250 aa13.27□□□□□ -0.29
MRPL40-201ENST00000333130 LINC00469Q8N7U9 141 aa13.27□□□□□ -0.29
MRPL40-201ENST00000333130 F8VRH5 84 aa13.26□□□□□ -0.29
MRPL40-201ENST00000333130 SLPIP03973 132 aa13.26□□□□□ -0.29
MRPL40-201ENST00000333130 SYCNQ0VAF6 134 aa13.26□□□□□ -0.29
MRPL40-201ENST00000333130 C2orf48Q96LS8 159 aa13.26□□□□□ -0.29
MRPL40-201ENST00000333130 CAMK2N2Q96S95 79 aa13.26□□□□□ -0.29
MRPL40-201ENST00000333130 C11orf86A6NJI1 115 aa13.25□□□□□ -0.29
MRPL40-201ENST00000333130 F8WDY8 70 aa13.25□□□□□ -0.29
MRPL40-201ENST00000333130 ZNF22P17026 224 aaPredicted RBP13.25□□□□□ -0.29
MRPL40-201ENST00000333130 LINC00526Q96FQ7 95 aa13.25□□□□□ -0.29
MRPL40-201ENST00000333130 MAP1LC3CQ9BXW4 147 aa13.25□□□□□ -0.29
MRPL40-201ENST00000333130 MRPL35Q9NZE8 188 aaKnown RBP13.25□□□□□ -0.29
MRPL40-201ENST00000333130 S100A6P06703 90 aa13.24□□□□□ -0.29
MRPL40-201ENST00000333130 HIST3H2BBQ8N257 126 aa13.24□□□□□ -0.29
MRPL40-201ENST00000333130 SMIM1B2RUZ4 78 aa13.23□□□□□ -0.29
MRPL40-201ENST00000333130 H0Y8G0 127 aa13.23□□□□□ -0.29
MRPL40-201ENST00000333130 Q6ZSA8 131 aa13.23□□□□□ -0.29
MRPL40-201ENST00000333130 PRSS2P07478 247 aa13.22□□□□□ -0.29
MRPL40-201ENST00000333130 KIAA0087Q14695 138 aa13.22□□□□□ -0.29
MRPL40-201ENST00000333130 H3BRM9 83 aa13.21□□□□□ -0.29
MRPL40-201ENST00000333130 SYS1-DBNDD2H3BUS1 97 aa13.21□□□□□ -0.29
MRPL40-201ENST00000333130 NDUFA1O15239 70 aa13.21□□□□□ -0.29
MRPL40-201ENST00000333130 APOBP04114 4563 aaKnown RBP13.21□□□□□ -0.3
MRPL40-201ENST00000333130 KIAA1109Q2LD37 5005 aa13.21□□□□□ -0.3
MRPL40-201ENST00000333130 SDIM1Q6ZPB5 146 aa13.2□□□□□ -0.3
MRPL40-201ENST00000333130 FAM30AQ9NZY2 134 aa13.2□□□□□ -0.3
MRPL40-201ENST00000333130 XGP55808 180 aa13.2□□□□□ -0.3
MRPL40-201ENST00000333130 Q8IZM0 81 aa13.2□□□□□ -0.3
MRPL40-201ENST00000333130 C5orf52A6NGY3 159 aa13.19□□□□□ -0.3
MRPL40-201ENST00000333130 SPINK8P0C7L1 97 aa13.19□□□□□ -0.3
MRPL40-201ENST00000333130 C3orf79P0CE67 100 aa13.19□□□□□ -0.3
MRPL40-201ENST00000333130 PLNP26678 52 aa13.19□□□□□ -0.3
MRPL40-201ENST00000333130 Q6ZRU5 148 aa13.19□□□□□ -0.3
MRPL40-201ENST00000333130 HIST1H2BLQ99880 126 aa13.19□□□□□ -0.3
MRPL40-201ENST00000333130 TOMM7Q9P0U1 55 aa13.19□□□□□ -0.3
MRPL40-201ENST00000333130 IGLV5-39A0A0G2JS06 123 aa13.18□□□□□ -0.3
MRPL40-201ENST00000333130 SNRPEP62304 92 aaKnown RBP13.18□□□□□ -0.3
MRPL40-201ENST00000333130 TMEM170BQ5T4T1 132 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms