RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 LINC00308Q8TCZ7 52 aa10.01□□□□□ -0.81
ATP2C1-201ENST00000328560 DAZ3Q9NR90 486 aaKnown RBP10.01□□□□□ -0.81
ATP2C1-201ENST00000328560 SMIM1B2RUZ4 78 aa10.01□□□□□ -0.81
ATP2C1-201ENST00000328560 TMEM243Q9BU79 118 aa10.01□□□□□ -0.81
ATP2C1-201ENST00000328560 TMEM262E9PQX1 116 aa10□□□□□ -0.81
ATP2C1-201ENST00000328560 TRBV10-1A0A0K0K1A3 114 aa10□□□□□ -0.81
ATP2C1-201ENST00000328560 H7C423 109 aa9.99□□□□□ -0.81
ATP2C1-201ENST00000328560 IFITM1P13164 125 aa9.99□□□□□ -0.81
ATP2C1-201ENST00000328560 UBE2WQ96B02 151 aa9.99□□□□□ -0.81
ATP2C1-201ENST00000328560 CDC42SE2Q9NRR3 84 aa9.99□□□□□ -0.81
ATP2C1-201ENST00000328560 IGLV5-45A0A087WSX0 123 aa9.99□□□□□ -0.81
ATP2C1-201ENST00000328560 GIG44P09565 113 aaPredicted RBP9.99□□□□□ -0.81
ATP2C1-201ENST00000328560 DEFB130BP0DP73 79 aa9.98□□□□□ -0.81
ATP2C1-201ENST00000328560 DEFB130AP0DP74 79 aa9.98□□□□□ -0.81
ATP2C1-201ENST00000328560 TRAV8-4A0A0B4J246 113 aa9.98□□□□□ -0.81
ATP2C1-201ENST00000328560 IL17DQ8TAD2 202 aa9.98□□□□□ -0.81
ATP2C1-201ENST00000328560 CHCHD5Q9BSY4 110 aa9.98□□□□□ -0.81
ATP2C1-201ENST00000328560 ITPR2Q14571 2701 aa9.98□□□□□ -0.81
ATP2C1-201ENST00000328560 NBPF19A0A087WUL8 3843 aa9.98□□□□□ -0.81
ATP2C1-201ENST00000328560 TIMM17BO60830 172 aa9.98□□□□□ -0.81
ATP2C1-201ENST00000328560 SOSTDC1Q6X4U4 206 aa9.98□□□□□ -0.81
ATP2C1-201ENST00000328560 IGLV5-39A0A0G2JS06 123 aa9.97□□□□□ -0.81
ATP2C1-201ENST00000328560 NBEAL2Q6ZNJ1 2754 aa9.97□□□□□ -0.81
ATP2C1-201ENST00000328560 C16orf74Q96GX8 76 aa9.96□□□□□ -0.81
ATP2C1-201ENST00000328560 SNCGO76070 127 aa9.96□□□□□ -0.82
ATP2C1-201ENST00000328560 C16orf95Q9H693 158 aa9.96□□□□□ -0.82
ATP2C1-201ENST00000328560 LST1O00453 97 aa9.95□□□□□ -0.82
ATP2C1-201ENST00000328560 HILS1P60008 231 aa9.95□□□□□ -0.82
ATP2C1-201ENST00000328560 CRLF1O75462 422 aa9.95□□□□□ -0.82
ATP2C1-201ENST00000328560 SMR3AQ99954 134 aa9.95□□□□□ -0.82
ATP2C1-201ENST00000328560 HELZ2Q9BYK8 2649 aaKnown RBP9.95□□□□□ -0.82
ATP2C1-201ENST00000328560 FASNP49327 2511 aaKnown RBP9.95□□□□□ -0.82
ATP2C1-201ENST00000328560 C11orf68Q9H3H3 251 aaKnown RBP9.94□□□□□ -0.82
ATP2C1-201ENST00000328560 GCN1Q92616 2671 aaKnown RBP9.94□□□□□ -0.82
ATP2C1-201ENST00000328560 PLAC8L1A1L4L8 177 aa9.94□□□□□ -0.82
ATP2C1-201ENST00000328560 IGLV1-51P01701 117 aa9.94□□□□□ -0.82
ATP2C1-201ENST00000328560 IGLV4-60A0A075B6I1 120 aa9.94□□□□□ -0.82
ATP2C1-201ENST00000328560 CSDC2Q9Y534 153 aaKnown RBP9.94□□□□□ -0.82
ATP2C1-201ENST00000328560 F5H768 121 aa9.93□□□□□ -0.82
ATP2C1-201ENST00000328560 C5orf38Q86SI9 138 aa9.93□□□□□ -0.82
ATP2C1-201ENST00000328560 A0A096LPF7 62 aa9.92□□□□□ -0.82
ATP2C1-201ENST00000328560 LINC00158P58513 81 aa9.92□□□□□ -0.82
ATP2C1-201ENST00000328560 SMIM20Q8N5G0 67 aa9.92□□□□□ -0.82
ATP2C1-201ENST00000328560 AKAP9Q99996 3911 aa9.92□□□□□ -0.82
ATP2C1-201ENST00000328560 KRTAP1-1Q07627 177 aa9.92□□□□□ -0.82
ATP2C1-201ENST00000328560 GAGE2BQ13066 116 aa9.92□□□□□ -0.82
ATP2C1-201ENST00000328560 GAGE2EQ4V326 116 aa9.92□□□□□ -0.82
ATP2C1-201ENST00000328560 C15orf53Q8NAA6 179 aa9.92□□□□□ -0.82
ATP2C1-201ENST00000328560 GAGE2DQ9UEU5 116 aa9.92□□□□□ -0.82
ATP2C1-201ENST00000328560 H3BT86 120 aa9.92□□□□□ -0.82
ATP2C1-201ENST00000328560 M0QXV9 152 aa9.92□□□□□ -0.82
ATP2C1-201ENST00000328560 TTC32Q5I0X7 151 aa9.92□□□□□ -0.82
ATP2C1-201ENST00000328560 ANAPC13Q9BS18 74 aa9.92□□□□□ -0.82
ATP2C1-201ENST00000328560 MIR7-3HGQ8N6C7 128 aa9.91□□□□□ -0.82
ATP2C1-201ENST00000328560 PFN2P35080 140 aa9.91□□□□□ -0.82
ATP2C1-201ENST00000328560 CLPSL2Q6UWE3 100 aa9.91□□□□□ -0.82
ATP2C1-201ENST00000328560 RNF183Q96D59 192 aa9.91□□□□□ -0.82
ATP2C1-201ENST00000328560 C19orf73Q9NVV2 129 aa9.91□□□□□ -0.82
ATP2C1-201ENST00000328560 TRBV6-4A0A1B0GX49 114 aa9.9□□□□□ -0.82
ATP2C1-201ENST00000328560 COX7B2Q8TF08 81 aa9.9□□□□□ -0.82
ATP2C1-201ENST00000328560 TENM4Q6N022 2769 aa9.9□□□□□ -0.82
ATP2C1-201ENST00000328560 COPS9Q8WXC6 57 aa9.9□□□□□ -0.82
ATP2C1-201ENST00000328560 TRBV6-8A0A0A6YYG3 113 aa9.89□□□□□ -0.83
ATP2C1-201ENST00000328560 FHL2Q14192 279 aa9.89□□□□□ -0.83
ATP2C1-201ENST00000328560 COX7A2LO14548 114 aa9.89□□□□□ -0.83
ATP2C1-201ENST00000328560 CSNK1G2-AS1Q8NCQ2 148 aa9.88□□□□□ -0.83
ATP2C1-201ENST00000328560 FAM110AQ9BQ89 295 aa9.88□□□□□ -0.83
ATP2C1-201ENST00000328560 HECTD1Q9ULT8 2610 aa9.88□□□□□ -0.83
ATP2C1-201ENST00000328560 CRPP02741 224 aa9.87□□□□□ -0.83
ATP2C1-201ENST00000328560 XCL1P47992 114 aa9.87□□□□□ -0.83
ATP2C1-201ENST00000328560 Q9HAA7 133 aa9.87□□□□□ -0.83
ATP2C1-201ENST00000328560 SND1-IT1Q9HBX3 110 aa9.87□□□□□ -0.83
ATP2C1-201ENST00000328560 GYPEP15421 78 aa9.87□□□□□ -0.83
ATP2C1-201ENST00000328560 UNC79Q9P2D8 2635 aa9.86□□□□□ -0.83
ATP2C1-201ENST00000328560 DEFB4AO15263 64 aa9.86□□□□□ -0.83
ATP2C1-201ENST00000328560 FAM19A3Q7Z5A8 133 aa9.86□□□□□ -0.83
ATP2C1-201ENST00000328560 LY6G6DO95868 133 aa9.86□□□□□ -0.83
ATP2C1-201ENST00000328560 OVOL2Q9BRP0 275 aa9.86□□□□□ -0.83
ATP2C1-201ENST00000328560 BAALC-AS2P0C853 105 aa9.85□□□□□ -0.83
ATP2C1-201ENST00000328560 OR13C6PQ8NH95 151 aa9.85□□□□□ -0.83
ATP2C1-201ENST00000328560 FAM218AQ96MZ4 157 aa9.85□□□□□ -0.83
ATP2C1-201ENST00000328560 C6orf226Q5I0X4 101 aa9.84□□□□□ -0.83
ATP2C1-201ENST00000328560 PAX4O43316 350 aa9.84□□□□□ -0.83
ATP2C1-201ENST00000328560 LINC00482Q8N8I6 264 aa9.84□□□□□ -0.83
ATP2C1-201ENST00000328560 LINC00337Q8N6G1 96 aa9.84□□□□□ -0.83
ATP2C1-201ENST00000328560 IGHV3OR16-9A0A0B4J2B5 98 aa9.83□□□□□ -0.84
ATP2C1-201ENST00000328560 B5MCH6 92 aa9.83□□□□□ -0.84
ATP2C1-201ENST00000328560 INAFM1C9JVW0 142 aa9.83□□□□□ -0.84
ATP2C1-201ENST00000328560 PDZD2O15018 2839 aa9.82□□□□□ -0.84
ATP2C1-201ENST00000328560 TRAV13-2A0A0B4J235 113 aa9.82□□□□□ -0.84
ATP2C1-201ENST00000328560 CCL18P55774 89 aa9.81□□□□□ -0.84
ATP2C1-201ENST00000328560 LINC00959A0A1B0GUT2 108 aa9.81□□□□□ -0.84
ATP2C1-201ENST00000328560 LINC01600Q96MT4 127 aa9.81□□□□□ -0.84
ATP2C1-201ENST00000328560 ATP5G1P05496 136 aa9.81□□□□□ -0.84
ATP2C1-201ENST00000328560 NDUFV3P56181 108 aaKnown RBP9.81□□□□□ -0.84
ATP2C1-201ENST00000328560 KRTAP10-3P60369 221 aa9.81□□□□□ -0.84
ATP2C1-201ENST00000328560 IGKV2-28A0A075B6P5 120 aa9.8□□□□□ -0.84
ATP2C1-201ENST00000328560 IGKV2D-28P01615 120 aa9.8□□□□□ -0.84
ATP2C1-201ENST00000328560 C9orf66Q5T8R8 295 aa9.8□□□□□ -0.84
ATP2C1-201ENST00000328560 IGLV10-54A0A075B6I4 117 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms