RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 SBSPONQ8IVN8 264 aa9.24□□□□□ -0.93
HMGCS1-201ENST00000325110 SS18L2Q9UHA2 77 aa9.24□□□□□ -0.93
HMGCS1-201ENST00000325110 HECTD1Q9ULT8 2610 aa9.24□□□□□ -0.93
HMGCS1-201ENST00000325110 CRPP02741 224 aa9.23□□□□□ -0.93
HMGCS1-201ENST00000325110 Q9HAA7 133 aa9.23□□□□□ -0.93
HMGCS1-201ENST00000325110 SMIM1B2RUZ4 78 aa9.23□□□□□ -0.93
HMGCS1-201ENST00000325110 NTM-AS1Q6ZSK4 140 aa9.23□□□□□ -0.93
HMGCS1-201ENST00000325110 DNAL4O96015 105 aa9.23□□□□□ -0.93
HMGCS1-201ENST00000325110 TIRAPP58753 221 aa9.23□□□□□ -0.93
HMGCS1-201ENST00000325110 LST1O00453 97 aa9.22□□□□□ -0.93
HMGCS1-201ENST00000325110 PAX4O43316 350 aa9.22□□□□□ -0.93
HMGCS1-201ENST00000325110 DAZ2Q13117 558 aaKnown RBP9.22□□□□□ -0.93
HMGCS1-201ENST00000325110 DAZ4Q86SG3 579 aaKnown RBP9.22□□□□□ -0.93
HMGCS1-201ENST00000325110 Q8N2B8 174 aa9.22□□□□□ -0.93
HMGCS1-201ENST00000325110 MIR7-3HGQ8N6C7 128 aa9.22□□□□□ -0.93
HMGCS1-201ENST00000325110 DAZ3Q9NR90 486 aaKnown RBP9.22□□□□□ -0.93
HMGCS1-201ENST00000325110 C3orf56Q8N813 242 aa9.22□□□□□ -0.93
HMGCS1-201ENST00000325110 H3BT86 120 aa9.22□□□□□ -0.93
HMGCS1-201ENST00000325110 BEAN1Q3B7T3 259 aa9.22□□□□□ -0.93
HMGCS1-201ENST00000325110 COPS9Q8WXC6 57 aa9.22□□□□□ -0.93
HMGCS1-201ENST00000325110 ESM1Q9NQ30 184 aa9.21□□□□□ -0.94
HMGCS1-201ENST00000325110 XCL1P47992 114 aa9.2□□□□□ -0.94
HMGCS1-201ENST00000325110 SOSTDC1Q6X4U4 206 aa9.2□□□□□ -0.94
HMGCS1-201ENST00000325110 ITPR2Q14571 2701 aa9.2□□□□□ -0.94
HMGCS1-201ENST00000325110 FSHBP01225 129 aa9.2□□□□□ -0.94
HMGCS1-201ENST00000325110 PF4P02776 101 aa9.2□□□□□ -0.94
HMGCS1-201ENST00000325110 BAALC-AS2P0C853 105 aa9.2□□□□□ -0.94
HMGCS1-201ENST00000325110 CDC42SE2Q9NRR3 84 aa9.2□□□□□ -0.94
HMGCS1-201ENST00000325110 RNASE1P07998 156 aaKnown RBP9.19□□□□□ -0.94
HMGCS1-201ENST00000325110 C6orf226Q5I0X4 101 aa9.19□□□□□ -0.94
HMGCS1-201ENST00000325110 GAGE2AQ6NT46 116 aa9.19□□□□□ -0.94
HMGCS1-201ENST00000325110 TRBV10-1A0A0K0K1A3 114 aa9.19□□□□□ -0.94
HMGCS1-201ENST00000325110 ZNF843Q8N446 348 aa9.19□□□□□ -0.94
HMGCS1-201ENST00000325110 SND1-IT1Q9HBX3 110 aa9.19□□□□□ -0.94
HMGCS1-201ENST00000325110 NDUFV3P56181 108 aaKnown RBP9.18□□□□□ -0.94
HMGCS1-201ENST00000325110 CR1P17927 2039 aa9.18□□□□□ -0.94
HMGCS1-201ENST00000325110 HELZ2Q9BYK8 2649 aaKnown RBP9.18□□□□□ -0.94
HMGCS1-201ENST00000325110 COX7A2LO14548 114 aa9.18□□□□□ -0.94
HMGCS1-201ENST00000325110 COX7B2Q8TF08 81 aa9.18□□□□□ -0.94
HMGCS1-201ENST00000325110 EDA2RQ9HAV5 297 aa9.18□□□□□ -0.94
HMGCS1-201ENST00000325110 DEFB4AO15263 64 aa9.18□□□□□ -0.94
HMGCS1-201ENST00000325110 ATP5G1P05496 136 aa9.17□□□□□ -0.94
HMGCS1-201ENST00000325110 IGLV4-60A0A075B6I1 120 aa9.17□□□□□ -0.94
HMGCS1-201ENST00000325110 HTN3P15516 51 aa9.17□□□□□ -0.94
HMGCS1-201ENST00000325110 TIMM17BO60830 172 aa9.17□□□□□ -0.94
HMGCS1-201ENST00000325110 TRAV25A0A0B4J276 109 aa9.16□□□□□ -0.94
HMGCS1-201ENST00000325110 LINC01006Q8NI28 216 aa9.16□□□□□ -0.94
HMGCS1-201ENST00000325110 C16orf74Q96GX8 76 aa9.16□□□□□ -0.94
HMGCS1-201ENST00000325110 IGLV10-54A0A075B6I4 117 aa9.15□□□□□ -0.94
HMGCS1-201ENST00000325110 IGLV5-39A0A0G2JS06 123 aa9.15□□□□□ -0.95
HMGCS1-201ENST00000325110 A8MTW9 85 aa9.15□□□□□ -0.95
HMGCS1-201ENST00000325110 CCDC179H3BU77 68 aa9.15□□□□□ -0.95
HMGCS1-201ENST00000325110 HERV-K104P63124 156 aa9.15□□□□□ -0.95
HMGCS1-201ENST00000325110 GYPEP15421 78 aa9.14□□□□□ -0.95
HMGCS1-201ENST00000325110 IGLV5-45A0A087WSX0 123 aa9.13□□□□□ -0.95
HMGCS1-201ENST00000325110 CITED1Q99966 193 aa9.13□□□□□ -0.95
HMGCS1-201ENST00000325110 ATRQ13535 2644 aa9.13□□□□□ -0.95
HMGCS1-201ENST00000325110 TRAV13-2A0A0B4J235 113 aa9.13□□□□□ -0.95
HMGCS1-201ENST00000325110 FAM236AA0A1B0GUQ0 79 aa9.13□□□□□ -0.95
HMGCS1-201ENST00000325110 FAM236BA0A1B0GV22 79 aa9.13□□□□□ -0.95
HMGCS1-201ENST00000325110 SLPIP03973 132 aa9.12□□□□□ -0.95
HMGCS1-201ENST00000325110 FAM218AQ96MZ4 157 aa9.12□□□□□ -0.95
HMGCS1-201ENST00000325110 TRBV6-8A0A0A6YYG3 113 aa9.11□□□□□ -0.95
HMGCS1-201ENST00000325110 LECT2O14960 151 aa9.11□□□□□ -0.95
HMGCS1-201ENST00000325110 LINC00337Q8N6G1 96 aa9.1□□□□□ -0.95
HMGCS1-201ENST00000325110 F5H768 121 aa9.1□□□□□ -0.95
HMGCS1-201ENST00000325110 LINC00482Q8N8I6 264 aa9.1□□□□□ -0.95
HMGCS1-201ENST00000325110 M0QXV9 152 aa9.09□□□□□ -0.95
HMGCS1-201ENST00000325110 TMEM86BQ8N661 226 aa9.09□□□□□ -0.95
HMGCS1-201ENST00000325110 SMR3AQ99954 134 aa9.09□□□□□ -0.95
HMGCS1-201ENST00000325110 C14orf132Q9NPU4 83 aa9.09□□□□□ -0.95
HMGCS1-201ENST00000325110 TRBV6-4A0A1B0GX49 114 aa9.09□□□□□ -0.95
HMGCS1-201ENST00000325110 CCL18P55774 89 aa9.09□□□□□ -0.95
HMGCS1-201ENST00000325110 LRRC75A-AS1Q8N1F1 130 aa9.09□□□□□ -0.95
HMGCS1-201ENST00000325110 CMC4P56277 68 aaPredicted RBP9.09□□□□□ -0.95
HMGCS1-201ENST00000325110 SS18Q15532 418 aa9.09□□□□□ -0.95
HMGCS1-201ENST00000325110 SMIM11BQ8TCY0 68 aa9.09□□□□□ -0.95
HMGCS1-201ENST00000325110 CSDC2Q9Y534 153 aaKnown RBP9.09□□□□□ -0.95
HMGCS1-201ENST00000325110 UBR5O95071 2799 aaPredicted RBP9.08□□□□□ -0.96
HMGCS1-201ENST00000325110 GIG44P09565 113 aaPredicted RBP9.08□□□□□ -0.96
HMGCS1-201ENST00000325110 MALP21145 153 aa9.08□□□□□ -0.96
HMGCS1-201ENST00000325110 CFAP161Q6P656 301 aa9.08□□□□□ -0.96
HMGCS1-201ENST00000325110 ANGP03950 147 aaKnown RBP9.08□□□□□ -0.96
HMGCS1-201ENST00000325110 NHLRC4P0CG21 123 aaPredicted RBP9.07□□□□□ -0.96
HMGCS1-201ENST00000325110 A0A087WYN8 130 aa9.07□□□□□ -0.96
HMGCS1-201ENST00000325110 PRR3P79522 188 aaKnown RBP9.07□□□□□ -0.96
HMGCS1-201ENST00000325110 FHL2Q14192 279 aa9.07□□□□□ -0.96
HMGCS1-201ENST00000325110 DEFB135Q30KP9 77 aa9.07□□□□□ -0.96
HMGCS1-201ENST00000325110 UNC79Q9P2D8 2635 aa9.06□□□□□ -0.96
HMGCS1-201ENST00000325110 IGKV3D-7A0A0C4DH55 119 aa9.06□□□□□ -0.96
HMGCS1-201ENST00000325110 IGLV1-51P01701 117 aa9.06□□□□□ -0.96
HMGCS1-201ENST00000325110 INAFM2P0DMQ5 153 aa9.06□□□□□ -0.96
HMGCS1-201ENST00000325110 SHISA2Q6UWI4 295 aa9.06□□□□□ -0.96
HMGCS1-201ENST00000325110 TRACP01848 142 aa9.05□□□□□ -0.96
HMGCS1-201ENST00000325110 LINC00959A0A1B0GUT2 108 aa9.05□□□□□ -0.96
HMGCS1-201ENST00000325110 LINC00526Q96FQ7 95 aa9.05□□□□□ -0.96
HMGCS1-201ENST00000325110 KRTAP1-3Q8IUG1 177 aa9.05□□□□□ -0.96
HMGCS1-201ENST00000325110 NCR3O14931 201 aa9.04□□□□□ -0.96
HMGCS1-201ENST00000325110 LINC00269Q8N2A0 174 aa9.04□□□□□ -0.96
HMGCS1-201ENST00000325110 PLAC8L1A1L4L8 177 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms