RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 PPDPFQ9H3Y8 114 aa7.84□□□□□ -1.15
SNRNP200-201ENST00000323853 FAM240AA0A1B0GVK7 77 aa7.84□□□□□ -1.15
SNRNP200-201ENST00000323853 ADAMTSL4-AS1Q5T5F5 129 aa7.84□□□□□ -1.15
SNRNP200-201ENST00000323853 IGLV1-51P01701 117 aa7.83□□□□□ -1.16
SNRNP200-201ENST00000323853 HCFC1P51610 2035 aa7.83□□□□□ -1.16
SNRNP200-201ENST00000323853 LRCOL1A6NCL2 159 aa7.83□□□□□ -1.16
SNRNP200-201ENST00000323853 Q6ZSN1 163 aa7.83□□□□□ -1.16
SNRNP200-201ENST00000323853 IGLV4-60A0A075B6I1 120 aa7.83□□□□□ -1.16
SNRNP200-201ENST00000323853 LINC01546A6NGU7 62 aa7.83□□□□□ -1.16
SNRNP200-201ENST00000323853 CASC2Q6XLA1 102 aa7.83□□□□□ -1.16
SNRNP200-201ENST00000323853 KRTAP10-9P60411 292 aa7.83□□□□□ -1.16
SNRNP200-201ENST00000323853 CSDC2Q9Y534 153 aaKnown RBP7.82□□□□□ -1.16
SNRNP200-201ENST00000323853 A0A1W2PPR1 153 aa7.82□□□□□ -1.16
SNRNP200-201ENST00000323853 BEAN1Q3B7T3 259 aa7.82□□□□□ -1.16
SNRNP200-201ENST00000323853 ROS1P08922 2347 aa7.82□□□□□ -1.16
SNRNP200-201ENST00000323853 C7orf33Q8WU49 177 aa7.82□□□□□ -1.16
SNRNP200-201ENST00000323853 ACACAQ13085 2346 aa7.82□□□□□ -1.16
SNRNP200-201ENST00000323853 PLAC8L1A1L4L8 177 aa7.82□□□□□ -1.16
SNRNP200-201ENST00000323853 HRCT1Q6UXD1 115 aa7.82□□□□□ -1.16
SNRNP200-201ENST00000323853 FAM30AQ9NZY2 134 aa7.82□□□□□ -1.16
SNRNP200-201ENST00000323853 C9orf116Q5BN46 136 aaPredicted RBP7.81□□□□□ -1.16
SNRNP200-201ENST00000323853 UNQ6190/PRO20217Q6UXQ8 127 aa7.81□□□□□ -1.16
SNRNP200-201ENST00000323853 FAM19A3Q7Z5A8 133 aa7.81□□□□□ -1.16
SNRNP200-201ENST00000323853 WFDC13Q8IUB5 93 aa7.81□□□□□ -1.16
SNRNP200-201ENST00000323853 SMR3AQ99954 134 aa7.8□□□□□ -1.16
SNRNP200-201ENST00000323853 CNOT1A5YKK6 2376 aaKnown RBP7.8□□□□□ -1.16
SNRNP200-201ENST00000323853 SPTSSBQ8NFR3 76 aa7.8□□□□□ -1.16
SNRNP200-201ENST00000323853 M0R2N4 97 aa7.8□□□□□ -1.16
SNRNP200-201ENST00000323853 EGFEM1PQ0D2K5 195 aa7.8□□□□□ -1.16
SNRNP200-201ENST00000323853 WNK2Q9Y3S1 2297 aa7.79□□□□□ -1.16
SNRNP200-201ENST00000323853 NTM-AS1Q6ZSK4 140 aa7.79□□□□□ -1.16
SNRNP200-201ENST00000323853 LINC00474Q9P2X8 69 aa7.79□□□□□ -1.16
SNRNP200-201ENST00000323853 V9GYY9 64 aa7.79□□□□□ -1.16
SNRNP200-201ENST00000323853 RETNQ9HD89 108 aa7.79□□□□□ -1.16
SNRNP200-201ENST00000323853 TRBV10-3A0A0K0K1G6 114 aa7.79□□□□□ -1.16
SNRNP200-201ENST00000323853 EML5Q05BV3 1969 aa7.78□□□□□ -1.16
SNRNP200-201ENST00000323853 OXLD1Q5BKU9 147 aa7.78□□□□□ -1.16
SNRNP200-201ENST00000323853 CACNA1BQ00975 2339 aa7.78□□□□□ -1.16
SNRNP200-201ENST00000323853 IGLV9-49A0A0B4J1Y8 123 aa7.78□□□□□ -1.16
SNRNP200-201ENST00000323853 PRR3P79522 188 aaKnown RBP7.78□□□□□ -1.16
SNRNP200-201ENST00000323853 MRPL55Q7Z7F7 128 aaKnown RBP7.77□□□□□ -1.16
SNRNP200-201ENST00000323853 COL4A2P08572 1712 aa7.77□□□□□ -1.17
SNRNP200-201ENST00000323853 C10orf25Q5T742 122 aa7.77□□□□□ -1.17
SNRNP200-201ENST00000323853 REG3GQ6UW15 175 aa7.77□□□□□ -1.17
SNRNP200-201ENST00000323853 NACAE9PAV3 2078 aa7.77□□□□□ -1.17
SNRNP200-201ENST00000323853 M0QXV9 152 aa7.77□□□□□ -1.17
SNRNP200-201ENST00000323853 PRR15LQ9BU68 103 aa7.77□□□□□ -1.17
SNRNP200-201ENST00000323853 TANC2Q9HCD6 1990 aa7.76□□□□□ -1.17
SNRNP200-201ENST00000323853 SPTBN1Q01082 2364 aaKnown RBP7.76□□□□□ -1.17
SNRNP200-201ENST00000323853 SVIPQ8NHG7 77 aa7.76□□□□□ -1.17
SNRNP200-201ENST00000323853 DSCAMO60469 2012 aa7.76□□□□□ -1.17
SNRNP200-201ENST00000323853 LINC01561Q8N1V8 128 aa7.75□□□□□ -1.17
SNRNP200-201ENST00000323853 AKAP6Q13023 2319 aa7.75□□□□□ -1.17
SNRNP200-201ENST00000323853 TRAV7A0A075B6U4 112 aa7.75□□□□□ -1.17
SNRNP200-201ENST00000323853 F8WDY8 70 aa7.75□□□□□ -1.17
SNRNP200-201ENST00000323853 C6orf223Q8N319 242 aa7.75□□□□□ -1.17
SNRNP200-201ENST00000323853 SPINK6Q6UWN8 80 aa7.75□□□□□ -1.17
SNRNP200-201ENST00000323853 KIF25-AS1Q9Y6Z4 181 aa7.75□□□□□ -1.17
SNRNP200-201ENST00000323853 A0A1B0GUV1 79 aa7.74□□□□□ -1.17
SNRNP200-201ENST00000323853 FAM19A4Q96LR4 140 aa7.74□□□□□ -1.17
SNRNP200-201ENST00000323853 A0A087WVE0 104 aa7.73□□□□□ -1.17
SNRNP200-201ENST00000323853 C1orf137Q5JT78 98 aa7.73□□□□□ -1.17
SNRNP200-201ENST00000323853 A0A0U1RQV1 116 aa7.72□□□□□ -1.17
SNRNP200-201ENST00000323853 Q6ZTC4 211 aa7.72□□□□□ -1.17
SNRNP200-201ENST00000323853 LYPD5Q6UWN5 251 aa7.71□□□□□ -1.17
SNRNP200-201ENST00000323853 LY6G6CO95867 125 aa7.71□□□□□ -1.18
SNRNP200-201ENST00000323853 PRR4Q16378 134 aa7.71□□□□□ -1.18
SNRNP200-201ENST00000323853 C11orf72Q8NBR9 251 aa7.71□□□□□ -1.18
SNRNP200-201ENST00000323853 Q8N2B8 174 aa7.71□□□□□ -1.18
SNRNP200-201ENST00000323853 NUPR2A6NF83 97 aa7.71□□□□□ -1.18
SNRNP200-201ENST00000323853 CELA1Q9UNI1 258 aa7.71□□□□□ -1.18
SNRNP200-201ENST00000323853 C2orf48Q96LS8 159 aa7.7□□□□□ -1.18
SNRNP200-201ENST00000323853 SERP1Q9Y6X1 66 aa7.7□□□□□ -1.18
SNRNP200-201ENST00000323853 PRYO14603 147 aa7.69□□□□□ -1.18
SNRNP200-201ENST00000323853 LINC00575Q6W349 94 aa7.69□□□□□ -1.18
SNRNP200-201ENST00000323853 Q8N9L7 120 aa7.68□□□□□ -1.18
SNRNP200-201ENST00000323853 ESRGQ1W209 222 aa7.68□□□□□ -1.18
SNRNP200-201ENST00000323853 IGLV5-39A0A0G2JS06 123 aa7.67□□□□□ -1.18
SNRNP200-201ENST00000323853 GVINP1Q7Z2Y8 2422 aa7.67□□□□□ -1.18
SNRNP200-201ENST00000323853 LINC00315P59091 139 aa7.67□□□□□ -1.18
SNRNP200-201ENST00000323853 ABCA4P78363 2273 aa7.67□□□□□ -1.18
SNRNP200-201ENST00000323853 PCNX1Q96RV3 2341 aa7.67□□□□□ -1.18
SNRNP200-201ENST00000323853 SMIM26A0A096LP01 95 aa7.66□□□□□ -1.18
SNRNP200-201ENST00000323853 LINC00337Q8N6G1 96 aa7.66□□□□□ -1.18
SNRNP200-201ENST00000323853 Q9BRP9 147 aa7.66□□□□□ -1.18
SNRNP200-201ENST00000323853 DSCAML1Q8TD84 2053 aa7.66□□□□□ -1.18
SNRNP200-201ENST00000323853 A6NED7 52 aa7.66□□□□□ -1.18
SNRNP200-201ENST00000323853 ABCA1O95477 2261 aa7.65□□□□□ -1.18
SNRNP200-201ENST00000323853 SPTBN2O15020 2390 aa7.65□□□□□ -1.18
SNRNP200-201ENST00000323853 K7ERS5 55 aa7.65□□□□□ -1.19
SNRNP200-201ENST00000323853 Q6ZRU5 148 aa7.65□□□□□ -1.19
SNRNP200-201ENST00000323853 CDIP1Q9H305 208 aa7.65□□□□□ -1.19
SNRNP200-201ENST00000323853 Q8N3U1 123 aa7.64□□□□□ -1.19
SNRNP200-201ENST00000323853 LINC00846Q9NV44 126 aa7.64□□□□□ -1.19
SNRNP200-201ENST00000323853 IGLV5-52A0A0A0MRZ9 124 aa7.64□□□□□ -1.19
SNRNP200-201ENST00000323853 Q6ZVQ6 151 aa7.64□□□□□ -1.19
SNRNP200-201ENST00000323853 A8MTW9 85 aa7.63□□□□□ -1.19
SNRNP200-201ENST00000323853 TRBV7-7A0A0K0K1E9 115 aa7.63□□□□□ -1.19
SNRNP200-201ENST00000323853 LINC00208Q96KT6 92 aa7.63□□□□□ -1.19
SNRNP200-201ENST00000323853 IGHV6-1A0A0B4J1U7 121 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms