RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 C10orf25Q5T742 122 aa12.51□□□□□ -0.41
SMCHD1-201ENST00000320876 UBE2D4Q9Y2X8 147 aa12.51□□□□□ -0.41
SMCHD1-201ENST00000320876 FBXL19-AS1Q494R0 122 aa12.51□□□□□ -0.41
SMCHD1-201ENST00000320876 LY6LH3BQJ8 138 aa12.5□□□□□ -0.41
SMCHD1-201ENST00000320876 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.5□□□□□ -0.41
SMCHD1-201ENST00000320876 UBE2D1P51668 147 aa12.5□□□□□ -0.41
SMCHD1-201ENST00000320876 FSTL3O95633 263 aa12.5□□□□□ -0.41
SMCHD1-201ENST00000320876 LINC00526Q96FQ7 95 aa12.49□□□□□ -0.41
SMCHD1-201ENST00000320876 NRGNQ92686 78 aa12.49□□□□□ -0.41
SMCHD1-201ENST00000320876 SETD2Q9BYW2 2564 aaPredicted RBP12.49□□□□□ -0.41
SMCHD1-201ENST00000320876 EBI3Q14213 229 aa12.49□□□□□ -0.41
SMCHD1-201ENST00000320876 COL27A1Q8IZC6 1860 aaPredicted RBP12.49□□□□□ -0.41
SMCHD1-201ENST00000320876 SPINK6Q6UWN8 80 aa12.49□□□□□ -0.41
SMCHD1-201ENST00000320876 PRYO14603 147 aa12.49□□□□□ -0.41
SMCHD1-201ENST00000320876 LINC00474Q9P2X8 69 aa12.49□□□□□ -0.41
SMCHD1-201ENST00000320876 BRWD1-AS2P59051 145 aa12.48□□□□□ -0.41
SMCHD1-201ENST00000320876 IGHV4-30-4P0DP06 118 aa12.47□□□□□ -0.41
SMCHD1-201ENST00000320876 IGHV4-31P0DP07 118 aa12.47□□□□□ -0.41
SMCHD1-201ENST00000320876 UBE2D3P61077 147 aa12.47□□□□□ -0.41
SMCHD1-201ENST00000320876 NAV2Q8IVL1 2488 aa12.47□□□□□ -0.41
SMCHD1-201ENST00000320876 CNFNQ9BYD5 112 aa12.46□□□□□ -0.41
SMCHD1-201ENST00000320876 IGLV4-69A0A075B6H9 119 aa12.46□□□□□ -0.41
SMCHD1-201ENST00000320876 Q8IZM0 81 aa12.46□□□□□ -0.41
SMCHD1-201ENST00000320876 MUC22E2RYF6 1773 aaPredicted RBP12.46□□□□□ -0.42
SMCHD1-201ENST00000320876 LOC107984640A0A0U1RRK4 108 aa12.46□□□□□ -0.42
SMCHD1-201ENST00000320876 Q6YL49 198 aa12.46□□□□□ -0.42
SMCHD1-201ENST00000320876 LINC01548A6NM66 108 aa12.46□□□□□ -0.42
SMCHD1-201ENST00000320876 A8MZ25 164 aa12.45□□□□□ -0.42
SMCHD1-201ENST00000320876 Q8N976 141 aa12.45□□□□□ -0.42
SMCHD1-201ENST00000320876 Q6ZS46 218 aa12.45□□□□□ -0.42
SMCHD1-201ENST00000320876 NTM-AS1Q6ZSK4 140 aa12.45□□□□□ -0.42
SMCHD1-201ENST00000320876 Q8N814 137 aa12.44□□□□□ -0.42
SMCHD1-201ENST00000320876 RNASE3P12724 160 aaKnown RBP12.44□□□□□ -0.42
SMCHD1-201ENST00000320876 TRBV7-6A0A0J9YX20 115 aa12.44□□□□□ -0.42
SMCHD1-201ENST00000320876 Q6ZVQ6 151 aa12.44□□□□□ -0.42
SMCHD1-201ENST00000320876 PROK1P58294 105 aa12.43□□□□□ -0.42
SMCHD1-201ENST00000320876 Q6ZPA2 131 aa12.43□□□□□ -0.42
SMCHD1-201ENST00000320876 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.42□□□□□ -0.42
SMCHD1-201ENST00000320876 LELP1Q5T871 98 aa12.42□□□□□ -0.42
SMCHD1-201ENST00000320876 KLLNB2CW77 178 aa12.42□□□□□ -0.42
SMCHD1-201ENST00000320876 ESRGQ1W209 222 aa12.42□□□□□ -0.42
SMCHD1-201ENST00000320876 IGLV9-49A0A0B4J1Y8 123 aa12.42□□□□□ -0.42
SMCHD1-201ENST00000320876 RPL37AP8A6NKH3 93 aa12.41□□□□□ -0.42
SMCHD1-201ENST00000320876 CELA1Q9UNI1 258 aa12.41□□□□□ -0.42
SMCHD1-201ENST00000320876 LINC00959A0A1B0GUT2 108 aa12.41□□□□□ -0.42
SMCHD1-201ENST00000320876 PPDPFQ9H3Y8 114 aa12.41□□□□□ -0.42
SMCHD1-201ENST00000320876 MSMPQ1L6U9 139 aa12.4□□□□□ -0.42
SMCHD1-201ENST00000320876 ABCA12Q86UK0 2595 aa12.4□□□□□ -0.42
SMCHD1-201ENST00000320876 ANKRD17O75179 2603 aaKnown RBP12.4□□□□□ -0.42
SMCHD1-201ENST00000320876 SOSTDC1Q6X4U4 206 aa12.39□□□□□ -0.43
SMCHD1-201ENST00000320876 TLN1Q9Y490 2541 aaKnown RBP12.39□□□□□ -0.43
SMCHD1-201ENST00000320876 LMO4P61968 165 aa12.39□□□□□ -0.43
SMCHD1-201ENST00000320876 POM121L12Q8N7R1 296 aa12.38□□□□□ -0.43
SMCHD1-201ENST00000320876 POLR2KP53803 58 aaKnown RBP12.38□□□□□ -0.43
SMCHD1-201ENST00000320876 MRGPRG-AS1Q2M3A8 158 aa12.38□□□□□ -0.43
SMCHD1-201ENST00000320876 PSPHP1O15172 72 aa12.38□□□□□ -0.43
SMCHD1-201ENST00000320876 TRAV10A0A0B4J240 114 aa12.38□□□□□ -0.43
SMCHD1-201ENST00000320876 BBC3Q96PG8 261 aaPredicted RBP12.37□□□□□ -0.43
SMCHD1-201ENST00000320876 CSDC2Q9Y534 153 aaKnown RBP12.37□□□□□ -0.43
SMCHD1-201ENST00000320876 RPL28P46779 137 aaKnown RBP12.37□□□□□ -0.43
SMCHD1-201ENST00000320876 PLA2G5P39877 138 aa12.37□□□□□ -0.43
SMCHD1-201ENST00000320876 C1orf229Q6ZS94 237 aaPredicted RBP12.37□□□□□ -0.43
SMCHD1-201ENST00000320876 PLAC8L1A1L4L8 177 aa12.36□□□□□ -0.43
SMCHD1-201ENST00000320876 KPRPQ5T749 579 aaPredicted RBP12.36□□□□□ -0.43
SMCHD1-201ENST00000320876 RETNQ9HD89 108 aa12.36□□□□□ -0.43
SMCHD1-201ENST00000320876 LINC00208Q96KT6 92 aa12.36□□□□□ -0.43
SMCHD1-201ENST00000320876 C1orf137Q5JT78 98 aa12.35□□□□□ -0.43
SMCHD1-201ENST00000320876 CDC42SE2Q9NRR3 84 aa12.35□□□□□ -0.43
SMCHD1-201ENST00000320876 IGIPA6NJ69 53 aa12.34□□□□□ -0.43
SMCHD1-201ENST00000320876 LOC100131303A0A0U1RQF7 123 aa12.34□□□□□ -0.43
SMCHD1-201ENST00000320876 Q8N3U1 123 aa12.33□□□□□ -0.43
SMCHD1-201ENST00000320876 REG3GQ6UW15 175 aa12.33□□□□□ -0.44
SMCHD1-201ENST00000320876 CRIP3Q6Q6R5 217 aa12.33□□□□□ -0.44
SMCHD1-201ENST00000320876 PRR9Q5T870 116 aa12.33□□□□□ -0.44
SMCHD1-201ENST00000320876 A0A087WYN8 130 aa12.32□□□□□ -0.44
SMCHD1-201ENST00000320876 LINC01547P58512 204 aaPredicted RBP12.32□□□□□ -0.44
SMCHD1-201ENST00000320876 CYSRT1A8MQ03 144 aa12.31□□□□□ -0.44
SMCHD1-201ENST00000320876 TRBV7-7A0A0K0K1E9 115 aa12.31□□□□□ -0.44
SMCHD1-201ENST00000320876 ACANP16112 2415 aa12.3□□□□□ -0.44
SMCHD1-201ENST00000320876 IGF2RP11717 2491 aa12.3□□□□□ -0.44
SMCHD1-201ENST00000320876 PSMG3-AS1Q96PY0 264 aa12.3□□□□□ -0.44
SMCHD1-201ENST00000320876 ZNF462Q96JM2 2506 aa12.29□□□□□ -0.44
SMCHD1-201ENST00000320876 Q8NA96 180 aa12.29□□□□□ -0.44
SMCHD1-201ENST00000320876 H0Y9P7 68 aa12.28□□□□□ -0.44
SMCHD1-201ENST00000320876 F8P00451 2351 aa12.28□□□□□ -0.44
SMCHD1-201ENST00000320876 ZNF843Q8N446 348 aa12.28□□□□□ -0.44
SMCHD1-201ENST00000320876 PKD1L2Q7Z442 2459 aa12.28□□□□□ -0.44
SMCHD1-201ENST00000320876 A0A087WVE0 104 aa12.27□□□□□ -0.44
SMCHD1-201ENST00000320876 CXCL6P80162 114 aa12.27□□□□□ -0.44
SMCHD1-201ENST00000320876 TRBV10-3A0A0K0K1G6 114 aa12.27□□□□□ -0.45
SMCHD1-201ENST00000320876 LIMD2Q9BT23 127 aa12.27□□□□□ -0.45
SMCHD1-201ENST00000320876 C11orf21Q9P2W6 132 aa12.27□□□□□ -0.45
SMCHD1-201ENST00000320876 PRO0628Q9UI54 55 aa12.27□□□□□ -0.45
SMCHD1-201ENST00000320876 IGHV6-1A0A0B4J1U7 121 aa12.26□□□□□ -0.45
SMCHD1-201ENST00000320876 GAS8-AS1O95177 125 aa12.26□□□□□ -0.45
SMCHD1-201ENST00000320876 LINC00482Q8N8I6 264 aa12.26□□□□□ -0.45
SMCHD1-201ENST00000320876 SMIM1B2RUZ4 78 aa12.26□□□□□ -0.45
SMCHD1-201ENST00000320876 EGFEM1PQ0D2K5 195 aa12.26□□□□□ -0.45
SMCHD1-201ENST00000320876 LINC00242Q5T6M2 205 aa12.25□□□□□ -0.45
SMCHD1-201ENST00000320876 LINC00575Q6W349 94 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms