RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 GCSHP23434 173 aa12.27□□□□□ -0.44
RAB39A-201ENST00000320578 LYPD5Q6UWN5 251 aa12.27□□□□□ -0.44
RAB39A-201ENST00000320578 NDUFA12Q9UI09 145 aa12.27□□□□□ -0.45
RAB39A-201ENST00000320578 DEFB131BA0A096LNP1 70 aa12.26□□□□□ -0.45
RAB39A-201ENST00000320578 IGHV3OR16-9A0A0B4J2B5 98 aa12.26□□□□□ -0.45
RAB39A-201ENST00000320578 NANOS2P60321 138 aaKnown RBP12.26□□□□□ -0.45
RAB39A-201ENST00000320578 TAX1BP3O14907 124 aa12.25□□□□□ -0.45
RAB39A-201ENST00000320578 FXYD2P54710 66 aa12.25□□□□□ -0.45
RAB39A-201ENST00000320578 SS18Q15532 418 aa12.25□□□□□ -0.45
RAB39A-201ENST00000320578 LINC01561Q8N1V8 128 aa12.25□□□□□ -0.45
RAB39A-201ENST00000320578 C10orf126Q8N4M7 172 aa12.25□□□□□ -0.45
RAB39A-201ENST00000320578 NBEAL1Q6ZS30 2694 aa12.25□□□□□ -0.45
RAB39A-201ENST00000320578 NDUFA1O15239 70 aa12.25□□□□□ -0.45
RAB39A-201ENST00000320578 COX11Q9Y6N1 276 aa12.25□□□□□ -0.45
RAB39A-201ENST00000320578 MGAM2Q2M2H8 2515 aa12.24□□□□□ -0.45
RAB39A-201ENST00000320578 A0A0J9YXY3 114 aa12.24□□□□□ -0.45
RAB39A-201ENST00000320578 SRSF9Q13242 221 aaKnown RBP eCLIP12.24□□□□□ -0.45
RAB39A-201ENST00000320578 LURAP1LQ8IV03 231 aa12.24□□□□□ -0.45
RAB39A-201ENST00000320578 A0A087WZ39 114 aa12.23□□□□□ -0.45
RAB39A-201ENST00000320578 TRAV10A0A0B4J240 114 aa12.23□□□□□ -0.45
RAB39A-201ENST00000320578 TMEM238C9JI98 176 aa12.23□□□□□ -0.45
RAB39A-201ENST00000320578 TIMM17BO60830 172 aa12.23□□□□□ -0.45
RAB39A-201ENST00000320578 PTTG1IPP53801 180 aa12.23□□□□□ -0.45
RAB39A-201ENST00000320578 MRAPQ8TCY5 172 aa12.23□□□□□ -0.45
RAB39A-201ENST00000320578 Q6ZVH6 145 aa12.22□□□□□ -0.45
RAB39A-201ENST00000320578 TMEM238LA0A1B0GVL6 79 aa12.21□□□□□ -0.45
RAB39A-201ENST00000320578 A0A1B0GWB2 263 aa12.21□□□□□ -0.45
RAB39A-201ENST00000320578 A6NJY4 79 aa12.21□□□□□ -0.45
RAB39A-201ENST00000320578 IGHV3-30P01768 117 aa12.21□□□□□ -0.45
RAB39A-201ENST00000320578 SMIM13P0DJ93 91 aa12.21□□□□□ -0.45
RAB39A-201ENST00000320578 IGHV3-30-5P0DP03 117 aa12.21□□□□□ -0.45
RAB39A-201ENST00000320578 IGKV3OR2-268A0A0C4DH90 116 aa12.21□□□□□ -0.46
RAB39A-201ENST00000320578 LINC00269Q8N2A0 174 aa12.2□□□□□ -0.46
RAB39A-201ENST00000320578 C15orf53Q8NAA6 179 aa12.2□□□□□ -0.46
RAB39A-201ENST00000320578 ANGP03950 147 aaKnown RBP12.19□□□□□ -0.46
RAB39A-201ENST00000320578 HERV-K104P63124 156 aa12.19□□□□□ -0.46
RAB39A-201ENST00000320578 REG3AQ06141 175 aa12.19□□□□□ -0.46
RAB39A-201ENST00000320578 LITAFQ99732 161 aa12.19□□□□□ -0.46
RAB39A-201ENST00000320578 B9D2Q9BPU9 175 aa12.19□□□□□ -0.46
RAB39A-201ENST00000320578 SPANXDQ9BXN6 97 aa12.19□□□□□ -0.46
RAB39A-201ENST00000320578 PRR34Q9NV39 138 aa12.19□□□□□ -0.46
RAB39A-201ENST00000320578 SPANXCQ9NY87 97 aa12.19□□□□□ -0.46
RAB39A-201ENST00000320578 K7EP13 123 aa12.18□□□□□ -0.46
RAB39A-201ENST00000320578 CD164L2Q6UWJ8 174 aa12.18□□□□□ -0.46
RAB39A-201ENST00000320578 ZNF625Q96I27 306 aaPredicted RBP12.18□□□□□ -0.46
RAB39A-201ENST00000320578 TENM3Q9P273 2699 aa12.17□□□□□ -0.46
RAB39A-201ENST00000320578 C9orf118A6NHY6 69 aa12.17□□□□□ -0.46
RAB39A-201ENST00000320578 SFTA2Q6UW10 78 aa12.17□□□□□ -0.46
RAB39A-201ENST00000320578 NHP2Q9NX24 153 aaKnown RBP12.17□□□□□ -0.46
RAB39A-201ENST00000320578 COX7B2Q8TF08 81 aa12.16□□□□□ -0.46
RAB39A-201ENST00000320578 Q9H8V8 135 aa12.16□□□□□ -0.46
RAB39A-201ENST00000320578 CIRBPQ14011 172 aaKnown RBP12.16□□□□□ -0.46
RAB39A-201ENST00000320578 ESRGQ1W209 222 aa12.16□□□□□ -0.46
RAB39A-201ENST00000320578 XCL1P47992 114 aa12.15□□□□□ -0.46
RAB39A-201ENST00000320578 IFITM1P13164 125 aa12.14□□□□□ -0.47
RAB39A-201ENST00000320578 RPL24P83731 157 aaKnown RBP12.14□□□□□ -0.47
RAB39A-201ENST00000320578 C5orf38Q86SI9 138 aa12.14□□□□□ -0.47
RAB39A-201ENST00000320578 Q8N3U1 123 aa12.14□□□□□ -0.47
RAB39A-201ENST00000320578 CHCHD10Q8WYQ3 142 aaPredicted RBP12.14□□□□□ -0.47
RAB39A-201ENST00000320578 MIAQ16674 131 aa12.14□□□□□ -0.47
RAB39A-201ENST00000320578 KRTAP21-3Q3LHN1 58 aa12.14□□□□□ -0.47
RAB39A-201ENST00000320578 TRAV8-4A0A0B4J246 113 aa12.13□□□□□ -0.47
RAB39A-201ENST00000320578 CLPSL2Q6UWE3 100 aa12.13□□□□□ -0.47
RAB39A-201ENST00000320578 PPDPFQ9H3Y8 114 aa12.13□□□□□ -0.47
RAB39A-201ENST00000320578 HUWE1Q7Z6Z7 4374 aaKnown RBP12.12□□□□□ -0.47
RAB39A-201ENST00000320578 COX7A2LO14548 114 aa12.11□□□□□ -0.47
RAB39A-201ENST00000320578 NHLRC4P0CG21 123 aaPredicted RBP12.11□□□□□ -0.47
RAB39A-201ENST00000320578 ADAMTSL4-AS1Q5T5F5 129 aa12.11□□□□□ -0.47
RAB39A-201ENST00000320578 MUSTN1Q8IVN3 82 aa12.11□□□□□ -0.47
RAB39A-201ENST00000320578 Q8IZM0 81 aa12.11□□□□□ -0.47
RAB39A-201ENST00000320578 KLK12Q9UKR0 248 aa12.11□□□□□ -0.47
RAB39A-201ENST00000320578 LINC01556Q5JQF7 62 aa12.11□□□□□ -0.47
RAB39A-201ENST00000320578 ENHOQ6UWT2 76 aa12.11□□□□□ -0.47
RAB39A-201ENST00000320578 WFDC10BQ8IUB3 73 aa12.11□□□□□ -0.47
RAB39A-201ENST00000320578 COPS9Q8WXC6 57 aa12.11□□□□□ -0.47
RAB39A-201ENST00000320578 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.1□□□□□ -0.47
RAB39A-201ENST00000320578 K7ERJ3 54 aa12.1□□□□□ -0.47
RAB39A-201ENST00000320578 FOXI1Q12951 378 aa12.1□□□□□ -0.47
RAB39A-201ENST00000320578 RAB37Q96AX2 223 aa12.1□□□□□ -0.47
RAB39A-201ENST00000320578 A4D1N5 150 aa12.08□□□□□ -0.48
RAB39A-201ENST00000320578 IGLL5B9A064 214 aa12.08□□□□□ -0.48
RAB39A-201ENST00000320578 H3BUT2 72 aa12.08□□□□□ -0.48
RAB39A-201ENST00000320578 CRPP02741 224 aa12.08□□□□□ -0.48
RAB39A-201ENST00000320578 VAMP3Q15836 100 aa12.08□□□□□ -0.48
RAB39A-201ENST00000320578 TOMM7Q9P0U1 55 aa12.08□□□□□ -0.48
RAB39A-201ENST00000320578 A0A0B4J2C4 111 aa12.07□□□□□ -0.48
RAB39A-201ENST00000320578 IGHV3-33P01772 117 aa12.07□□□□□ -0.48
RAB39A-201ENST00000320578 PRSS2P07478 247 aa12.07□□□□□ -0.48
RAB39A-201ENST00000320578 CFC1BP0CG36 223 aa12.07□□□□□ -0.48
RAB39A-201ENST00000320578 CFC1P0CG37 223 aa12.07□□□□□ -0.48
RAB39A-201ENST00000320578 A0A1W2PPM0 123 aa12.07□□□□□ -0.48
RAB39A-201ENST00000320578 DNAH10OSP0CZ25 163 aa12.07□□□□□ -0.48
RAB39A-201ENST00000320578 CXCL5P42830 114 aa12.07□□□□□ -0.48
RAB39A-201ENST00000320578 UBE2V1Q13404 147 aa12.07□□□□□ -0.48
RAB39A-201ENST00000320578 C6orf226Q5I0X4 101 aa12.07□□□□□ -0.48
RAB39A-201ENST00000320578 KLK5Q9Y337 293 aaPredicted RBP12.07□□□□□ -0.48
RAB39A-201ENST00000320578 IBA57-AS1B1ANH7 110 aa12.06□□□□□ -0.48
RAB39A-201ENST00000320578 APOMO95445 188 aa12.06□□□□□ -0.48
RAB39A-201ENST00000320578 MEIG1Q5JSS6 88 aa12.06□□□□□ -0.48
RAB39A-201ENST00000320578 IGLV10-54A0A075B6I4 117 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms