RNA–Protein interactions for RNA: ENST00000301764.11

DDB1-201, Transcript of damage specific DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB1, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-201ENST00000301764 DEFB114Q30KQ6 69 aa11.11□□□□□ -0.63
DDB1-201ENST00000301764 HRCT1Q6UXD1 115 aa11.11□□□□□ -0.63
DDB1-201ENST00000301764 CAMK2N2Q96S95 79 aa11.11□□□□□ -0.63
DDB1-201ENST00000301764 CCL18P55774 89 aa11.11□□□□□ -0.63
DDB1-201ENST00000301764 FHL3Q13643 280 aa11.11□□□□□ -0.63
DDB1-201ENST00000301764 ATP5EP2Q5VTU8 51 aa11.11□□□□□ -0.63
DDB1-201ENST00000301764 PKIGQ9Y2B9 76 aa11.11□□□□□ -0.63
DDB1-201ENST00000301764 DIRC1Q969H9 104 aa11.11□□□□□ -0.63
DDB1-201ENST00000301764 CHCHD7Q9BUK0 85 aa11.11□□□□□ -0.63
DDB1-201ENST00000301764 SNURFQ9Y675 71 aa11.11□□□□□ -0.63
DDB1-201ENST00000301764 IGLV1-40P01703 118 aa11.1□□□□□ -0.63
DDB1-201ENST00000301764 ZFYVE26Q68DK2 2539 aa11.1□□□□□ -0.63
DDB1-201ENST00000301764 LINC00315P59091 139 aa11.1□□□□□ -0.63
DDB1-201ENST00000301764 PRUNE2Q8WUY3 3088 aa11.1□□□□□ -0.63
DDB1-201ENST00000301764 LRRK2Q5S007 2527 aa11.09□□□□□ -0.63
DDB1-201ENST00000301764 NDUFC2O95298 119 aa11.09□□□□□ -0.63
DDB1-201ENST00000301764 SBSPONQ8IVN8 264 aa11.09□□□□□ -0.63
DDB1-201ENST00000301764 LINC00269Q8N2A0 174 aa11.09□□□□□ -0.63
DDB1-201ENST00000301764 MPLKIPQ8TAP9 179 aa11.09□□□□□ -0.63
DDB1-201ENST00000301764 XIRP2A4UGR9 3374 aa11.09□□□□□ -0.63
DDB1-201ENST00000301764 LOC100131303A0A0U1RQF7 123 aa11.09□□□□□ -0.63
DDB1-201ENST00000301764 Q6JHZ5 121 aa11.09□□□□□ -0.63
DDB1-201ENST00000301764 FUSP35637 526 aaKnown RBP eCLIP11.09□□□□□ -0.63
DDB1-201ENST00000301764 C4orf3Q8WVX3 66 aa11.09□□□□□ -0.63
DDB1-201ENST00000301764 KLK12Q9UKR0 248 aa11.09□□□□□ -0.63
DDB1-201ENST00000301764 PRO3102Q9H379 93 aa11.08□□□□□ -0.63
DDB1-201ENST00000301764 TRBV6-8A0A0A6YYG3 113 aa11.08□□□□□ -0.64
DDB1-201ENST00000301764 CDC42SE2Q9NRR3 84 aa11.08□□□□□ -0.64
DDB1-201ENST00000301764 TRBV7-7A0A0K0K1E9 115 aa11.08□□□□□ -0.64
DDB1-201ENST00000301764 PDE6GP18545 87 aa11.07□□□□□ -0.64
DDB1-201ENST00000301764 TRIOO75962 3097 aa11.07□□□□□ -0.64
DDB1-201ENST00000301764 A0A0U1RQV1 116 aa11.07□□□□□ -0.64
DDB1-201ENST00000301764 ZNF462Q96JM2 2506 aa11.07□□□□□ -0.64
DDB1-201ENST00000301764 A0A087WYN8 130 aa11.07□□□□□ -0.64
DDB1-201ENST00000301764 C18orf65Q6ZTR6 163 aa11.06□□□□□ -0.64
DDB1-201ENST00000301764 PRO0255Q9UI72 69 aa11.06□□□□□ -0.64
DDB1-201ENST00000301764 HIGD2BQ4VC39 106 aa11.06□□□□□ -0.64
DDB1-201ENST00000301764 Q6ZSN1 163 aa11.06□□□□□ -0.64
DDB1-201ENST00000301764 RPL28P46779 137 aaKnown RBP11.05□□□□□ -0.64
DDB1-201ENST00000301764 IGKV2D-24A0A075B6R9 120 aa11.05□□□□□ -0.64
DDB1-201ENST00000301764 A0A1W2PPR1 153 aa11.04□□□□□ -0.64
DDB1-201ENST00000301764 APOC4P55056 127 aa11.04□□□□□ -0.64
DDB1-201ENST00000301764 CHCHD10Q8WYQ3 142 aaPredicted RBP11.04□□□□□ -0.64
DDB1-201ENST00000301764 XAGE1AQ9HD64 81 aa11.04□□□□□ -0.64
DDB1-201ENST00000301764 Q6ZQY7 126 aa11.03□□□□□ -0.64
DDB1-201ENST00000301764 COX7BP24311 80 aa11.03□□□□□ -0.64
DDB1-201ENST00000301764 Q8N2B8 174 aa11.03□□□□□ -0.64
DDB1-201ENST00000301764 LINC00846Q9NV44 126 aa11.03□□□□□ -0.64
DDB1-201ENST00000301764 CSDC2Q9Y534 153 aaKnown RBP11.03□□□□□ -0.64
DDB1-201ENST00000301764 DEFB135Q30KP9 77 aa11.02□□□□□ -0.65
DDB1-201ENST00000301764 TRBV6-4A0A1B0GX49 114 aa11.02□□□□□ -0.65
DDB1-201ENST00000301764 REG3AQ06141 175 aa11.02□□□□□ -0.65
DDB1-201ENST00000301764 AVPP01185 164 aa11.01□□□□□ -0.65
DDB1-201ENST00000301764 TRANK1O15050 2925 aa11.01□□□□□ -0.65
DDB1-201ENST00000301764 VPS13AQ96RL7 3174 aa11.01□□□□□ -0.65
DDB1-201ENST00000301764 BPY2O14599 106 aa11.01□□□□□ -0.65
DDB1-201ENST00000301764 H3BQ85 93 aa11.01□□□□□ -0.65
DDB1-201ENST00000301764 ETDCA0A1B0GVM5 59 aa11□□□□□ -0.65
DDB1-201ENST00000301764 CCKP06307 115 aa11□□□□□ -0.65
DDB1-201ENST00000301764 UBE2BP63146 152 aa11□□□□□ -0.65
DDB1-201ENST00000301764 PRR3P79522 188 aaKnown RBP11□□□□□ -0.65
DDB1-201ENST00000301764 LINC00959A0A1B0GUT2 108 aa10.99□□□□□ -0.65
DDB1-201ENST00000301764 WFDC10AQ9H1F0 79 aa10.99□□□□□ -0.65
DDB1-201ENST00000301764 CDH23Q9H251 3354 aa10.99□□□□□ -0.65
DDB1-201ENST00000301764 LINC00337Q8N6G1 96 aa10.99□□□□□ -0.65
DDB1-201ENST00000301764 Q9UF83 564 aa10.99□□□□□ -0.65
DDB1-201ENST00000301764 NHLRC4P0CG21 123 aaPredicted RBP10.98□□□□□ -0.65
DDB1-201ENST00000301764 PCSK5Q92824 1860 aa10.98□□□□□ -0.65
DDB1-201ENST00000301764 Q6YL49 198 aa10.98□□□□□ -0.65
DDB1-201ENST00000301764 FAM19A1Q7Z5A9 133 aa10.98□□□□□ -0.65
DDB1-201ENST00000301764 DNAH14Q0VDD8 3507 aa10.98□□□□□ -0.65
DDB1-201ENST00000301764 NDUFC2-KCTD14E9PQ53 114 aa10.97□□□□□ -0.65
DDB1-201ENST00000301764 NBEAQ8NFP9 2946 aa10.97□□□□□ -0.65
DDB1-201ENST00000301764 SPART-AS1P0CW21 52 aa10.97□□□□□ -0.65
DDB1-201ENST00000301764 DEFB113Q30KQ7 82 aa10.96□□□□□ -0.65
DDB1-201ENST00000301764 HILS1P60008 231 aa10.96□□□□□ -0.65
DDB1-201ENST00000301764 ZNF702PQ9H963 129 aa10.96□□□□□ -0.65
DDB1-201ENST00000301764 MUC4Q99102 2169 aa10.96□□□□□ -0.66
DDB1-201ENST00000301764 IGLV4-60A0A075B6I1 120 aa10.96□□□□□ -0.66
DDB1-201ENST00000301764 FASNP49327 2511 aaKnown RBP10.95□□□□□ -0.66
DDB1-201ENST00000301764 FREM2Q5SZK8 3169 aa10.95□□□□□ -0.66
DDB1-201ENST00000301764 NTM-AS1Q6ZSK4 140 aa10.95□□□□□ -0.66
DDB1-201ENST00000301764 PSCAO43653 123 aa10.94□□□□□ -0.66
DDB1-201ENST00000301764 FAM19A4Q96LR4 140 aa10.94□□□□□ -0.66
DDB1-201ENST00000301764 WDFY4Q6ZS81 3184 aa10.94□□□□□ -0.66
DDB1-201ENST00000301764 ODF3L2Q3SX64 289 aa10.94□□□□□ -0.66
DDB1-201ENST00000301764 PRORYQ9H606 182 aa10.94□□□□□ -0.66
DDB1-201ENST00000301764 C3orf84H3BNL1 204 aa10.93□□□□□ -0.66
DDB1-201ENST00000301764 FAM218AQ96MZ4 157 aa10.93□□□□□ -0.66
DDB1-201ENST00000301764 BBC3Q96PG8 261 aaPredicted RBP10.93□□□□□ -0.66
DDB1-201ENST00000301764 MP68P56378 58 aa10.93□□□□□ -0.66
DDB1-201ENST00000301764 SOSTDC1Q6X4U4 206 aa10.93□□□□□ -0.66
DDB1-201ENST00000301764 Q8N814 137 aa10.93□□□□□ -0.66
DDB1-201ENST00000301764 CDK2AP2O75956 126 aa10.92□□□□□ -0.66
DDB1-201ENST00000301764 ACANP16112 2415 aa10.92□□□□□ -0.66
DDB1-201ENST00000301764 C9orf116Q5BN46 136 aaPredicted RBP10.92□□□□□ -0.66
DDB1-201ENST00000301764 DNAJC9-AS1A6NH13 148 aa10.91□□□□□ -0.66
DDB1-201ENST00000301764 TRAV7A0A075B6U4 112 aa10.91□□□□□ -0.66
DDB1-201ENST00000301764 IGLV5-39A0A0G2JS06 123 aa10.91□□□□□ -0.66
DDB1-201ENST00000301764 CD164L2Q6UWJ8 174 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms