RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 VPREB1P12018 145 aa9.01□□□□□ -0.97
PCF11-201ENST00000298281 CLUHP3Q96NS8 147 aa9.01□□□□□ -0.97
PCF11-201ENST00000298281 M0QXV9 152 aa9.01□□□□□ -0.97
PCF11-201ENST00000298281 TRBV6-8A0A0A6YYG3 113 aa9.01□□□□□ -0.97
PCF11-201ENST00000298281 TDRG1Q3Y452 100 aa9.01□□□□□ -0.97
PCF11-201ENST00000298281 IGKV2D-30A0A075B6S6 120 aa9□□□□□ -0.97
PCF11-201ENST00000298281 IGKV2-30P06310 120 aa9□□□□□ -0.97
PCF11-201ENST00000298281 K7EQG2 157 aa9□□□□□ -0.97
PCF11-201ENST00000298281 C1orf137Q5JT78 98 aa9□□□□□ -0.97
PCF11-201ENST00000298281 ODF3BA8MYP8 253 aa9□□□□□ -0.97
PCF11-201ENST00000298281 E7EUB6 86 aa9□□□□□ -0.97
PCF11-201ENST00000298281 LINC01547P58512 204 aaPredicted RBP9□□□□□ -0.97
PCF11-201ENST00000298281 SPAG11AQ6PDA7 123 aa9□□□□□ -0.97
PCF11-201ENST00000298281 SOSTDC1Q6X4U4 206 aa9□□□□□ -0.97
PCF11-201ENST00000298281 TTTY13Q9BZ97 58 aa8.99□□□□□ -0.97
PCF11-201ENST00000298281 SPRY4Q9C004 299 aa8.99□□□□□ -0.97
PCF11-201ENST00000298281 F8P00451 2351 aa8.99□□□□□ -0.97
PCF11-201ENST00000298281 LMO4P61968 165 aa8.99□□□□□ -0.97
PCF11-201ENST00000298281 Q6YL49 198 aa8.98□□□□□ -0.97
PCF11-201ENST00000298281 CCDC140Q96MF4 163 aa8.98□□□□□ -0.97
PCF11-201ENST00000298281 DEFB114Q30KQ6 69 aa8.98□□□□□ -0.97
PCF11-201ENST00000298281 LRRK2Q5S007 2527 aa8.98□□□□□ -0.97
PCF11-201ENST00000298281 NAV2Q8IVL1 2488 aa8.98□□□□□ -0.97
PCF11-201ENST00000298281 CDPF1Q6NVV7 123 aa8.97□□□□□ -0.97
PCF11-201ENST00000298281 REG3GQ6UW15 175 aa8.97□□□□□ -0.97
PCF11-201ENST00000298281 hDV103S1A0JD37 113 aa8.97□□□□□ -0.97
PCF11-201ENST00000298281 BBC3Q96PG8 261 aaPredicted RBP8.97□□□□□ -0.97
PCF11-201ENST00000298281 TRBV6-4A0A1B0GX49 114 aa8.97□□□□□ -0.97
PCF11-201ENST00000298281 C2orf48Q96LS8 159 aa8.96□□□□□ -0.97
PCF11-201ENST00000298281 PIEZO1Q92508 2521 aa8.96□□□□□ -0.98
PCF11-201ENST00000298281 P0C879 139 aa8.96□□□□□ -0.98
PCF11-201ENST00000298281 PLA2G2EQ9NZK7 142 aa8.95□□□□□ -0.98
PCF11-201ENST00000298281 CDKN2A-AS1Q9UH64 79 aa8.95□□□□□ -0.98
PCF11-201ENST00000298281 MSMPQ1L6U9 139 aa8.95□□□□□ -0.98
PCF11-201ENST00000298281 H0Y9P7 68 aa8.95□□□□□ -0.98
PCF11-201ENST00000298281 NEXN-AS1Q8NBZ9 246 aa8.94□□□□□ -0.98
PCF11-201ENST00000298281 Q8NA96 180 aa8.94□□□□□ -0.98
PCF11-201ENST00000298281 LIMD2Q9BT23 127 aa8.94□□□□□ -0.98
PCF11-201ENST00000298281 LY6G6DO95868 133 aa8.94□□□□□ -0.98
PCF11-201ENST00000298281 RNASE3P12724 160 aaKnown RBP8.94□□□□□ -0.98
PCF11-201ENST00000298281 MUC7Q8TAX7 377 aa8.93□□□□□ -0.98
PCF11-201ENST00000298281 C11orf1Q9H5F2 150 aa8.93□□□□□ -0.98
PCF11-201ENST00000298281 TRBV30A0A0K0K1B3 111 aa8.93□□□□□ -0.98
PCF11-201ENST00000298281 LINC00308Q8TCZ7 52 aa8.93□□□□□ -0.98
PCF11-201ENST00000298281 CPAMD8Q8IZJ3 1885 aa8.93□□□□□ -0.98
PCF11-201ENST00000298281 ZNF73O43830 326 aaPredicted RBP8.93□□□□□ -0.98
PCF11-201ENST00000298281 ZNF80P51504 273 aaPredicted RBP8.93□□□□□ -0.98
PCF11-201ENST00000298281 IGLV4-3A0A075B6K6 122 aa8.93□□□□□ -0.98
PCF11-201ENST00000298281 DEFB116Q30KQ4 102 aa8.93□□□□□ -0.98
PCF11-201ENST00000298281 PYGO1Q9Y3Y4 419 aa8.93□□□□□ -0.98
PCF11-201ENST00000298281 CRIP2P52943 208 aaPredicted RBP8.92□□□□□ -0.98
PCF11-201ENST00000298281 PRORYQ9H606 182 aa8.92□□□□□ -0.98
PCF11-201ENST00000298281 RNASE8Q8TDE3 154 aaKnown RBP8.92□□□□□ -0.98
PCF11-201ENST00000298281 LELP1Q5T871 98 aa8.91□□□□□ -0.98
PCF11-201ENST00000298281 NDUFA7O95182 113 aa8.91□□□□□ -0.98
PCF11-201ENST00000298281 XGP55808 180 aa8.91□□□□□ -0.98
PCF11-201ENST00000298281 SMIM11BQ8TCY0 68 aa8.91□□□□□ -0.98
PCF11-201ENST00000298281 TRIAP1O43715 76 aa8.91□□□□□ -0.98
PCF11-201ENST00000298281 ZNF22P17026 224 aaPredicted RBP8.91□□□□□ -0.98
PCF11-201ENST00000298281 FHL2Q14192 279 aa8.91□□□□□ -0.98
PCF11-201ENST00000298281 CD164L2Q6UWJ8 174 aa8.91□□□□□ -0.98
PCF11-201ENST00000298281 A0A1B0GU69 56 aa8.9□□□□□ -0.98
PCF11-201ENST00000298281 M0QY20 66 aa8.9□□□□□ -0.99
PCF11-201ENST00000298281 IGLV8-61A0A075B6I0 122 aa8.9□□□□□ -0.99
PCF11-201ENST00000298281 C1orf134Q5TEV5 83 aa8.9□□□□□ -0.99
PCF11-201ENST00000298281 COX17Q14061 63 aa8.89□□□□□ -0.99
PCF11-201ENST00000298281 IMUPQ9GZP8 106 aa8.89□□□□□ -0.99
PCF11-201ENST00000298281 Q9BRP9 147 aa8.89□□□□□ -0.99
PCF11-201ENST00000298281 PROK1P58294 105 aa8.88□□□□□ -0.99
PCF11-201ENST00000298281 ZFYVE26Q68DK2 2539 aa8.88□□□□□ -0.99
PCF11-201ENST00000298281 A0A1W2PNU3 283 aaPredicted RBP8.88□□□□□ -0.99
PCF11-201ENST00000298281 C6orf223Q8N319 242 aa8.88□□□□□ -0.99
PCF11-201ENST00000298281 FLG2Q5D862 2391 aaPredicted RBP8.88□□□□□ -0.99
PCF11-201ENST00000298281 SPACA4Q8TDM5 124 aa8.87□□□□□ -0.99
PCF11-201ENST00000298281 SMIM26A0A096LP01 95 aa8.87□□□□□ -0.99
PCF11-201ENST00000298281 MDFIQ99750 246 aa8.87□□□□□ -0.99
PCF11-201ENST00000298281 EP400Q96L91 3159 aa8.87□□□□□ -0.99
PCF11-201ENST00000298281 HCG22E2RYF7 251 aa8.87□□□□□ -0.99
PCF11-201ENST00000298281 PSMG3-AS1Q96PY0 264 aa8.86□□□□□ -0.99
PCF11-201ENST00000298281 TRBV7-7A0A0K0K1E9 115 aa8.86□□□□□ -0.99
PCF11-201ENST00000298281 OXLD1Q5BKU9 147 aa8.86□□□□□ -0.99
PCF11-201ENST00000298281 Q6ZSV7 163 aa8.86□□□□□ -0.99
PCF11-201ENST00000298281 J3QL48 77 aa8.86□□□□□ -0.99
PCF11-201ENST00000298281 FRMD6-AS1P0C7T7 363 aa8.86□□□□□ -0.99
PCF11-201ENST00000298281 RBX1P62877 108 aa8.86□□□□□ -0.99
PCF11-201ENST00000298281 MRGPRG-AS1Q2M3A8 158 aa8.86□□□□□ -0.99
PCF11-201ENST00000298281 COX6B2Q6YFQ2 88 aa8.86□□□□□ -0.99
PCF11-201ENST00000298281 MBD6Q96DN6 1003 aa8.86□□□□□ -0.99
PCF11-201ENST00000298281 TP73-AS1Q9UF72 201 aa8.86□□□□□ -0.99
PCF11-201ENST00000298281 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.86□□□□□ -0.99
PCF11-201ENST00000298281 U3KQK5 164 aa8.86□□□□□ -0.99
PCF11-201ENST00000298281 FAM229AH3BQW9 127 aa8.85□□□□□ -0.99
PCF11-201ENST00000298281 MRPS36P82909 103 aaKnown RBP8.85□□□□□ -0.99
PCF11-201ENST00000298281 TMEM254Q8TBM7 123 aa8.84□□□□□ -0.99
PCF11-201ENST00000298281 LINC00694P0DN24 101 aa8.84□□□□□ -0.99
PCF11-201ENST00000298281 TRAV7A0A075B6U4 112 aa8.84□□□□□ -0.99
PCF11-201ENST00000298281 A8MZ25 164 aa8.84□□□□□ -0.99
PCF11-201ENST00000298281 LINC00575Q6W349 94 aa8.83□□□□□ -1
PCF11-201ENST00000298281 GDF5OSQ5U4N7 250 aa8.83□□□□□ -1
PCF11-201ENST00000298281 PLA2G5P39877 138 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms