RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 Q6YL49 198 aa11.28□□□□□ -0.6
UBAP1-201ENST00000297661 ATP5G1P05496 136 aa11.27□□□□□ -0.61
UBAP1-201ENST00000297661 IGHV3-38A0A0C4DH36 116 aa11.27□□□□□ -0.61
UBAP1-201ENST00000297661 SMIM9A6NGZ8 99 aa11.27□□□□□ -0.61
UBAP1-201ENST00000297661 C11orf44Q8N8P7 122 aa11.27□□□□□ -0.61
UBAP1-201ENST00000297661 PYGO1Q9Y3Y4 419 aa11.27□□□□□ -0.61
UBAP1-201ENST00000297661 COX7CP15954 63 aa11.26□□□□□ -0.61
UBAP1-201ENST00000297661 DAZ2Q13117 558 aaKnown RBP11.26□□□□□ -0.61
UBAP1-201ENST00000297661 DAZ4Q86SG3 579 aaKnown RBP11.26□□□□□ -0.61
UBAP1-201ENST00000297661 DAZ3Q9NR90 486 aaKnown RBP11.26□□□□□ -0.61
UBAP1-201ENST00000297661 A0A1B0GX51 115 aa11.25□□□□□ -0.61
UBAP1-201ENST00000297661 TMEM89A2RUT3 159 aa11.25□□□□□ -0.61
UBAP1-201ENST00000297661 COX7A2LO14548 114 aa11.25□□□□□ -0.61
UBAP1-201ENST00000297661 SDIM1Q6ZPB5 146 aa11.25□□□□□ -0.61
UBAP1-201ENST00000297661 C5orf38Q86SI9 138 aa11.25□□□□□ -0.61
UBAP1-201ENST00000297661 GAGE2AQ6NT46 116 aa11.24□□□□□ -0.61
UBAP1-201ENST00000297661 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.24□□□□□ -0.61
UBAP1-201ENST00000297661 TINCRA0A1B0GVN0 87 aa11.24□□□□□ -0.61
UBAP1-201ENST00000297661 IGKV2-29A2NJV5 120 aaPredicted RBP11.24□□□□□ -0.61
UBAP1-201ENST00000297661 EDA2RQ9HAV5 297 aa11.24□□□□□ -0.61
UBAP1-201ENST00000297661 J3QLI3 93 aa11.23□□□□□ -0.61
UBAP1-201ENST00000297661 TIMM17BO60830 172 aa11.23□□□□□ -0.61
UBAP1-201ENST00000297661 CXCL5P42830 114 aa11.23□□□□□ -0.61
UBAP1-201ENST00000297661 C2orf48Q96LS8 159 aa11.23□□□□□ -0.61
UBAP1-201ENST00000297661 PEMTQ9UBM1 199 aa11.23□□□□□ -0.61
UBAP1-201ENST00000297661 ATRQ13535 2644 aa11.23□□□□□ -0.61
UBAP1-201ENST00000297661 IGHV3OR16-12A0A075B7B8 117 aa11.22□□□□□ -0.61
UBAP1-201ENST00000297661 BAALC-AS2P0C853 105 aa11.22□□□□□ -0.61
UBAP1-201ENST00000297661 CRYGAP11844 174 aa11.22□□□□□ -0.61
UBAP1-201ENST00000297661 A0A1W2PRX2 142 aa11.21□□□□□ -0.61
UBAP1-201ENST00000297661 TIRAPP58753 221 aa11.21□□□□□ -0.61
UBAP1-201ENST00000297661 Q8N2B8 174 aa11.21□□□□□ -0.61
UBAP1-201ENST00000297661 hADV29S1A0JD25 119 aa11.21□□□□□ -0.62
UBAP1-201ENST00000297661 LINC00308Q8TCZ7 52 aa11.21□□□□□ -0.62
UBAP1-201ENST00000297661 DYNLRB2Q8TF09 96 aa11.21□□□□□ -0.62
UBAP1-201ENST00000297661 A0A0U1RRA0 63 aa11.2□□□□□ -0.62
UBAP1-201ENST00000297661 FSHBP01225 129 aa11.2□□□□□ -0.62
UBAP1-201ENST00000297661 MAP6D1Q9H9H5 199 aa11.2□□□□□ -0.62
UBAP1-201ENST00000297661 XCL2Q9UBD3 114 aa11.2□□□□□ -0.62
UBAP1-201ENST00000297661 CIRBPQ14011 172 aaKnown RBP11.2□□□□□ -0.62
UBAP1-201ENST00000297661 BEAN1Q3B7T3 259 aa11.2□□□□□ -0.62
UBAP1-201ENST00000297661 C22orf24Q9Y442 160 aa11.2□□□□□ -0.62
UBAP1-201ENST00000297661 NDUFA1O15239 70 aa11.19□□□□□ -0.62
UBAP1-201ENST00000297661 CDKN2A-AS1Q9UH64 79 aa11.19□□□□□ -0.62
UBAP1-201ENST00000297661 TRACP01848 142 aa11.19□□□□□ -0.62
UBAP1-201ENST00000297661 CYSTM1Q9H1C7 97 aa11.19□□□□□ -0.62
UBAP1-201ENST00000297661 ATOX1O00244 68 aa11.18□□□□□ -0.62
UBAP1-201ENST00000297661 HIST1H4AP62805 103 aaKnown RBP11.18□□□□□ -0.62
UBAP1-201ENST00000297661 RPS28P62857 69 aaKnown RBP11.18□□□□□ -0.62
UBAP1-201ENST00000297661 ZNF625Q96I27 306 aaPredicted RBP11.18□□□□□ -0.62
UBAP1-201ENST00000297661 LINC00467Q9BRT7 94 aa11.18□□□□□ -0.62
UBAP1-201ENST00000297661 RNF152Q8N8N0 203 aa11.17□□□□□ -0.62
UBAP1-201ENST00000297661 CHCHD7Q9BUK0 85 aa11.17□□□□□ -0.62
UBAP1-201ENST00000297661 UBE2D4Q9Y2X8 147 aa11.17□□□□□ -0.62
UBAP1-201ENST00000297661 ZNF415Q09FC8 603 aa11.17□□□□□ -0.62
UBAP1-201ENST00000297661 OR13C6PQ8NH95 151 aa11.17□□□□□ -0.62
UBAP1-201ENST00000297661 INAFM2P0DMQ5 153 aa11.16□□□□□ -0.62
UBAP1-201ENST00000297661 FAM218AQ96MZ4 157 aa11.16□□□□□ -0.62
UBAP1-201ENST00000297661 Q9H8V8 135 aa11.16□□□□□ -0.62
UBAP1-201ENST00000297661 C11orf72Q8NBR9 251 aa11.16□□□□□ -0.62
UBAP1-201ENST00000297661 SOSTDC1Q6X4U4 206 aa11.15□□□□□ -0.62
UBAP1-201ENST00000297661 IGHV3-53P01767 116 aa11.15□□□□□ -0.62
UBAP1-201ENST00000297661 DEFB114Q30KQ6 69 aa11.15□□□□□ -0.62
UBAP1-201ENST00000297661 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.15□□□□□ -0.62
UBAP1-201ENST00000297661 TRAV13-1A0A0B4J241 112 aa11.15□□□□□ -0.63
UBAP1-201ENST00000297661 RS1O15537 224 aa11.14□□□□□ -0.63
UBAP1-201ENST00000297661 FAM222AQ5U5X8 452 aa11.14□□□□□ -0.63
UBAP1-201ENST00000297661 KIR2DL5BQ8NHK3 375 aa11.14□□□□□ -0.63
UBAP1-201ENST00000297661 C4orf3Q8WVX3 66 aa11.14□□□□□ -0.63
UBAP1-201ENST00000297661 Q9HAA7 133 aa11.14□□□□□ -0.63
UBAP1-201ENST00000297661 RPL18AQ02543 176 aaKnown RBP11.13□□□□□ -0.63
UBAP1-201ENST00000297661 FBN1P35555 2871 aaKnown RBP11.13□□□□□ -0.63
UBAP1-201ENST00000297661 INSP01308 110 aa11.12□□□□□ -0.63
UBAP1-201ENST00000297661 ODF3L2Q3SX64 289 aa11.12□□□□□ -0.63
UBAP1-201ENST00000297661 TRGV1A0A0A0MS02 117 aa11.11□□□□□ -0.63
UBAP1-201ENST00000297661 A8MTW9 85 aa11.11□□□□□ -0.63
UBAP1-201ENST00000297661 COX6A2Q02221 97 aa11.11□□□□□ -0.63
UBAP1-201ENST00000297661 ESM1Q9NQ30 184 aa11.11□□□□□ -0.63
UBAP1-201ENST00000297661 IGLV5-45A0A087WSX0 123 aa11.11□□□□□ -0.63
UBAP1-201ENST00000297661 MALP21145 153 aa11.11□□□□□ -0.63
UBAP1-201ENST00000297661 DPH3Q96FX2 82 aa11.11□□□□□ -0.63
UBAP1-201ENST00000297661 IGKV3D-7A0A0C4DH55 119 aa11.1□□□□□ -0.63
UBAP1-201ENST00000297661 TMEM258P61165 79 aa11.1□□□□□ -0.63
UBAP1-201ENST00000297661 PRIMA1Q86XR5 153 aa11.1□□□□□ -0.63
UBAP1-201ENST00000297661 COPS9Q8WXC6 57 aa11.1□□□□□ -0.63
UBAP1-201ENST00000297661 COL6A5A8TX70 2615 aa11.09□□□□□ -0.63
UBAP1-201ENST00000297661 WIPF1O43516 503 aa11.09□□□□□ -0.63
UBAP1-201ENST00000297661 IGLV5-39A0A0G2JS06 123 aa11.09□□□□□ -0.63
UBAP1-201ENST00000297661 DNAL4O96015 105 aa11.09□□□□□ -0.63
UBAP1-201ENST00000297661 DGAT2L7PQ6IED9 249 aa11.09□□□□□ -0.63
UBAP1-201ENST00000297661 STHQ8IWL8 128 aa11.08□□□□□ -0.64
UBAP1-201ENST00000297661 C1orf158Q8N1D5 194 aa11.08□□□□□ -0.64
UBAP1-201ENST00000297661 SERP2Q8N6R1 65 aa11.08□□□□□ -0.64
UBAP1-201ENST00000297661 DSCR8Q96T75 97 aa11.08□□□□□ -0.64
UBAP1-201ENST00000297661 WFDC10AQ9H1F0 79 aa11.08□□□□□ -0.64
UBAP1-201ENST00000297661 TRAV25A0A0B4J276 109 aa11.08□□□□□ -0.64
UBAP1-201ENST00000297661 Q6ZTI0 123 aa11.08□□□□□ -0.64
UBAP1-201ENST00000297661 A0A087WVE0 104 aa11.07□□□□□ -0.64
UBAP1-201ENST00000297661 OXTP01178 125 aa11.07□□□□□ -0.64
UBAP1-201ENST00000297661 C9orf129Q5T035 196 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 163.5 ms