RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 TMEM238C9JI98 176 aa14.91□□□□□ -0.02
SOX17-201ENST00000297316 SH2D6Q7Z4S9 175 aa14.91□□□□□ -0.02
SOX17-201ENST00000297316 PRO0255Q9UI72 69 aa14.91□□□□□ -0.02
SOX17-201ENST00000297316 SPART-AS1P0CW21 52 aa14.9□□□□□ -0.02
SOX17-201ENST00000297316 ETDBQ3ZM63 59 aa14.89□□□□□ -0.03
SOX17-201ENST00000297316 LINC00242Q5T6M2 205 aa14.89□□□□□ -0.03
SOX17-201ENST00000297316 C10orf126Q8N4M7 172 aa14.89□□□□□ -0.03
SOX17-201ENST00000297316 GEMIN7Q9H840 131 aaKnown RBP14.89□□□□□ -0.03
SOX17-201ENST00000297316 PRO0461Q9UI25 63 aa14.89□□□□□ -0.03
SOX17-201ENST00000297316 IGHV1-58A0A0C4DH39 117 aa14.89□□□□□ -0.03
SOX17-201ENST00000297316 HTN3P15516 51 aa14.89□□□□□ -0.03
SOX17-201ENST00000297316 UBE2L6O14933 153 aa14.88□□□□□ -0.03
SOX17-201ENST00000297316 GAGE6Q13070 117 aa14.88□□□□□ -0.03
SOX17-201ENST00000297316 VSIG2Q96IQ7 327 aa14.88□□□□□ -0.03
SOX17-201ENST00000297316 TRBV6-8A0A0A6YYG3 113 aa14.88□□□□□ -0.03
SOX17-201ENST00000297316 TRAV13-1A0A0B4J241 112 aa14.88□□□□□ -0.03
SOX17-201ENST00000297316 TIRAPP58753 221 aa14.88□□□□□ -0.03
SOX17-201ENST00000297316 IGLV5-45A0A087WSX0 123 aa14.87□□□□□ -0.03
SOX17-201ENST00000297316 PAX4O43316 350 aa14.87□□□□□ -0.03
SOX17-201ENST00000297316 F5H768 121 aa14.86□□□□□ -0.03
SOX17-201ENST00000297316 ATP5G1P05496 136 aa14.86□□□□□ -0.03
SOX17-201ENST00000297316 APOMO95445 188 aa14.85□□□□□ -0.03
SOX17-201ENST00000297316 TSPAN13O95857 204 aa14.85□□□□□ -0.03
SOX17-201ENST00000297316 ATP6V0E2Q8NHE4 81 aa14.85□□□□□ -0.03
SOX17-201ENST00000297316 IGLV4-60A0A075B6I1 120 aa14.84□□□□□ -0.03
SOX17-201ENST00000297316 TRAV26-1A0A087WT03 109 aa14.84□□□□□ -0.03
SOX17-201ENST00000297316 IGHV3-30P01768 117 aa14.84□□□□□ -0.03
SOX17-201ENST00000297316 IGHV3-30-5P0DP03 117 aa14.84□□□□□ -0.03
SOX17-201ENST00000297316 SFTA2Q6UW10 78 aa14.84□□□□□ -0.03
SOX17-201ENST00000297316 K7EIL1 84 aa14.84□□□□□ -0.03
SOX17-201ENST00000297316 FAM19A3Q7Z5A8 133 aa14.84□□□□□ -0.03
SOX17-201ENST00000297316 A0A0J9YXY3 114 aa14.83□□□□□ -0.03
SOX17-201ENST00000297316 J3QR89 54 aa14.83□□□□□ -0.03
SOX17-201ENST00000297316 TMEM101Q96IK0 257 aa14.83□□□□□ -0.03
SOX17-201ENST00000297316 CHCHD5Q9BSY4 110 aa14.83□□□□□ -0.04
SOX17-201ENST00000297316 H7C423 109 aa14.82□□□□□ -0.04
SOX17-201ENST00000297316 LOC107984156A0A0G2JMH3 177 aa14.82□□□□□ -0.04
SOX17-201ENST00000297316 HERVK_113P63121 156 aa14.82□□□□□ -0.04
SOX17-201ENST00000297316 ARL17AQ8IVW1 177 aa14.82□□□□□ -0.04
SOX17-201ENST00000297316 NDUFA12Q9UI09 145 aa14.81□□□□□ -0.04
SOX17-201ENST00000297316 SMAGPQ0VAQ4 97 aa14.81□□□□□ -0.04
SOX17-201ENST00000297316 DEFB121Q5J5C9 76 aa14.8□□□□□ -0.04
SOX17-201ENST00000297316 MRAPQ8TCY5 172 aa14.8□□□□□ -0.04
SOX17-201ENST00000297316 GAGE12HA6NDE8 117 aa14.8□□□□□ -0.04
SOX17-201ENST00000297316 PSMB2P49721 201 aa14.8□□□□□ -0.04
SOX17-201ENST00000297316 LITAFQ99732 161 aa14.8□□□□□ -0.04
SOX17-201ENST00000297316 A0A0J9YWU9 116 aa14.79□□□□□ -0.04
SOX17-201ENST00000297316 CFC1BP0CG36 223 aa14.78□□□□□ -0.04
SOX17-201ENST00000297316 CFC1P0CG37 223 aa14.78□□□□□ -0.04
SOX17-201ENST00000297316 ZFAND6Q6FIF0 208 aa14.78□□□□□ -0.04
SOX17-201ENST00000297316 IGKV3OR2-268A0A0C4DH90 116 aa14.78□□□□□ -0.04
SOX17-201ENST00000297316 SMIM1B2RUZ4 78 aa14.78□□□□□ -0.04
SOX17-201ENST00000297316 SMCPP49901 116 aaPredicted RBP14.78□□□□□ -0.04
SOX17-201ENST00000297316 SIGMAR1Q99720 223 aa14.78□□□□□ -0.04
SOX17-201ENST00000297316 IGLV5-39A0A0G2JS06 123 aa14.77□□□□□ -0.04
SOX17-201ENST00000297316 Q6ZTC4 211 aa14.76□□□□□ -0.05
SOX17-201ENST00000297316 HUWE1Q7Z6Z7 4374 aaKnown RBP14.76□□□□□ -0.05
SOX17-201ENST00000297316 ADAMTSL4-AS1Q5T5F5 129 aa14.76□□□□□ -0.05
SOX17-201ENST00000297316 SPATA25Q9BR10 227 aa14.76□□□□□ -0.05
SOX17-201ENST00000297316 MUSTN1Q8IVN3 82 aa14.75□□□□□ -0.05
SOX17-201ENST00000297316 C11orf68Q9H3H3 251 aaKnown RBP14.75□□□□□ -0.05
SOX17-201ENST00000297316 EIF4EBP3O60516 100 aaPredicted RBP14.74□□□□□ -0.05
SOX17-201ENST00000297316 KPRPQ5T749 579 aaPredicted RBP14.74□□□□□ -0.05
SOX17-201ENST00000297316 LYRM7Q5U5X0 104 aa14.74□□□□□ -0.05
SOX17-201ENST00000297316 NANOS2P60321 138 aaKnown RBP14.73□□□□□ -0.05
SOX17-201ENST00000297316 TCL1BO95988 128 aa14.72□□□□□ -0.05
SOX17-201ENST00000297316 A4D1N5 150 aa14.72□□□□□ -0.05
SOX17-201ENST00000297316 NDUFA1O15239 70 aa14.72□□□□□ -0.05
SOX17-201ENST00000297316 FOXI1Q12951 378 aa14.72□□□□□ -0.05
SOX17-201ENST00000297316 PRO1854Q9UHT4 67 aa14.72□□□□□ -0.05
SOX17-201ENST00000297316 TMEM262E9PQX1 116 aa14.71□□□□□ -0.05
SOX17-201ENST00000297316 Q8N3U1 123 aa14.71□□□□□ -0.05
SOX17-201ENST00000297316 Q9H8V8 135 aa14.7□□□□□ -0.06
SOX17-201ENST00000297316 MRPL23Q16540 153 aaKnown RBP14.7□□□□□ -0.06
SOX17-201ENST00000297316 TM2D3Q9BRN9 247 aa14.69□□□□□ -0.06
SOX17-201ENST00000297316 ICOSQ9Y6W8 199 aa14.69□□□□□ -0.06
SOX17-201ENST00000297316 TRBV20-1A0A075B6N2 111 aa14.69□□□□□ -0.06
SOX17-201ENST00000297316 ZNF625Q96I27 306 aaPredicted RBP14.69□□□□□ -0.06
SOX17-201ENST00000297316 SCGB1A1P11684 91 aa14.68□□□□□ -0.06
SOX17-201ENST00000297316 NPC2P61916 151 aa14.68□□□□□ -0.06
SOX17-201ENST00000297316 SCGB1C2P0DMR2 95 aa14.67□□□□□ -0.06
SOX17-201ENST00000297316 DAND5Q8N907 189 aa14.67□□□□□ -0.06
SOX17-201ENST00000297316 SPANXDQ9BXN6 97 aa14.67□□□□□ -0.06
SOX17-201ENST00000297316 SPANXCQ9NY87 97 aa14.67□□□□□ -0.06
SOX17-201ENST00000297316 LINC00959A0A1B0GUT2 108 aa14.67□□□□□ -0.06
SOX17-201ENST00000297316 CLPSL2Q6UWE3 100 aa14.67□□□□□ -0.06
SOX17-201ENST00000297316 C11orf45Q8TAV5 145 aa14.67□□□□□ -0.06
SOX17-201ENST00000297316 IGHV3OR16-9A0A0B4J2B5 98 aa14.66□□□□□ -0.06
SOX17-201ENST00000297316 A0A1B0GUV1 79 aa14.66□□□□□ -0.06
SOX17-201ENST00000297316 COL7A1Q02388 2944 aa14.66□□□□□ -0.06
SOX17-201ENST00000297316 PRSS2P07478 247 aa14.66□□□□□ -0.06
SOX17-201ENST00000297316 MIAQ16674 131 aa14.66□□□□□ -0.06
SOX17-201ENST00000297316 IGHV3-33P01772 117 aa14.65□□□□□ -0.06
SOX17-201ENST00000297316 TEN1Q86WV5 123 aa14.64□□□□□ -0.07
SOX17-201ENST00000297316 A0A0B4J2C4 111 aa14.63□□□□□ -0.07
SOX17-201ENST00000297316 TIMM17BO60830 172 aa14.63□□□□□ -0.07
SOX17-201ENST00000297316 C5orf38Q86SI9 138 aa14.63□□□□□ -0.07
SOX17-201ENST00000297316 A0A0U1RRA0 63 aa14.63□□□□□ -0.07
SOX17-201ENST00000297316 H7C2G1 150 aa14.63□□□□□ -0.07
SOX17-201ENST00000297316 CARD19Q96LW7 228 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms