RNA–Protein interactions for RNA: ENST00000293683.9

PDE4A-201, Transcript of phosphodiesterase 4A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4A, Length 2,583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-201ENST00000293683 APCP25054 2843 aa12.28□□□□□ -0.44
PDE4A-201ENST00000293683 GAGE7O76087 117 aa12.28□□□□□ -0.44
PDE4A-201ENST00000293683 GAGE12FP0CL80 117 aa12.28□□□□□ -0.44
PDE4A-201ENST00000293683 GAGE12GP0CL81 117 aa12.28□□□□□ -0.44
PDE4A-201ENST00000293683 GAGE12IP0CL82 117 aa12.28□□□□□ -0.44
PDE4A-201ENST00000293683 DAZ2Q13117 558 aaKnown RBP12.28□□□□□ -0.44
PDE4A-201ENST00000293683 DAZ4Q86SG3 579 aaKnown RBP12.28□□□□□ -0.44
PDE4A-201ENST00000293683 DAZ3Q9NR90 486 aaKnown RBP12.28□□□□□ -0.44
PDE4A-201ENST00000293683 CSDC2Q9Y534 153 aaKnown RBP12.28□□□□□ -0.44
PDE4A-201ENST00000293683 IGKV3OR2-268A0A0C4DH90 116 aa12.27□□□□□ -0.44
PDE4A-201ENST00000293683 PLA2G2AP14555 144 aa12.27□□□□□ -0.45
PDE4A-201ENST00000293683 TRBV10-1A0A0K0K1A3 114 aa12.26□□□□□ -0.45
PDE4A-201ENST00000293683 SMCR5Q8TEV8 140 aa12.25□□□□□ -0.45
PDE4A-201ENST00000293683 CHCHD5Q9BSY4 110 aa12.25□□□□□ -0.45
PDE4A-201ENST00000293683 C22orf24Q9Y442 160 aa12.25□□□□□ -0.45
PDE4A-201ENST00000293683 UBE2L6O14933 153 aa12.25□□□□□ -0.45
PDE4A-201ENST00000293683 GIG44P09565 113 aaPredicted RBP12.25□□□□□ -0.45
PDE4A-201ENST00000293683 Q9HAA7 133 aa12.24□□□□□ -0.45
PDE4A-201ENST00000293683 TOMM7Q9P0U1 55 aa12.24□□□□□ -0.45
PDE4A-201ENST00000293683 MRPL23Q16540 153 aaKnown RBP12.24□□□□□ -0.45
PDE4A-201ENST00000293683 TMEM243Q9BU79 118 aa12.24□□□□□ -0.45
PDE4A-201ENST00000293683 FLNAP21333 2647 aaKnown RBP12.23□□□□□ -0.45
PDE4A-201ENST00000293683 BAALC-AS2P0C853 105 aa12.23□□□□□ -0.45
PDE4A-201ENST00000293683 PLAC8L1A1L4L8 177 aa12.23□□□□□ -0.45
PDE4A-201ENST00000293683 CCL24O00175 119 aa12.23□□□□□ -0.45
PDE4A-201ENST00000293683 MIR7-3HGQ8N6C7 128 aa12.23□□□□□ -0.45
PDE4A-201ENST00000293683 LINC00337Q8N6G1 96 aa12.23□□□□□ -0.45
PDE4A-201ENST00000293683 TRGV2A0A075B6R0 118 aa12.22□□□□□ -0.45
PDE4A-201ENST00000293683 HERV-K104P63124 156 aa12.22□□□□□ -0.45
PDE4A-201ENST00000293683 COPS9Q8WXC6 57 aa12.22□□□□□ -0.45
PDE4A-201ENST00000293683 TRBV7-7A0A0K0K1E9 115 aa12.21□□□□□ -0.45
PDE4A-201ENST00000293683 RPL35AP18077 110 aaKnown RBP12.21□□□□□ -0.45
PDE4A-201ENST00000293683 DEFB113Q30KQ7 82 aa12.21□□□□□ -0.45
PDE4A-201ENST00000293683 IGKV2-28A0A075B6P5 120 aa12.21□□□□□ -0.46
PDE4A-201ENST00000293683 IGKV2D-28P01615 120 aa12.21□□□□□ -0.46
PDE4A-201ENST00000293683 MTORP42345 2549 aa12.2□□□□□ -0.46
PDE4A-201ENST00000293683 IGLV4-60A0A075B6I1 120 aa12.2□□□□□ -0.46
PDE4A-201ENST00000293683 TRACP01848 142 aa12.2□□□□□ -0.46
PDE4A-201ENST00000293683 FN1P02751 2386 aaKnown RBP12.2□□□□□ -0.46
PDE4A-201ENST00000293683 TRAV25A0A0B4J276 109 aa12.2□□□□□ -0.46
PDE4A-201ENST00000293683 DNAJC9-AS1A6NH13 148 aa12.2□□□□□ -0.46
PDE4A-201ENST00000293683 C3orf56Q8N813 242 aa12.2□□□□□ -0.46
PDE4A-201ENST00000293683 COX7B2Q8TF08 81 aa12.2□□□□□ -0.46
PDE4A-201ENST00000293683 HIST2H2BCQ6DN03 193 aa12.19□□□□□ -0.46
PDE4A-201ENST00000293683 FAM236AA0A1B0GUQ0 79 aa12.18□□□□□ -0.46
PDE4A-201ENST00000293683 FAM236BA0A1B0GV22 79 aa12.18□□□□□ -0.46
PDE4A-201ENST00000293683 CRPP02741 224 aa12.18□□□□□ -0.46
PDE4A-201ENST00000293683 ESM1Q9NQ30 184 aa12.18□□□□□ -0.46
PDE4A-201ENST00000293683 ACANP16112 2415 aa12.18□□□□□ -0.46
PDE4A-201ENST00000293683 ZNF843Q8N446 348 aa12.18□□□□□ -0.46
PDE4A-201ENST00000293683 SND1-IT1Q9HBX3 110 aa12.18□□□□□ -0.46
PDE4A-201ENST00000293683 KRTAP1-3Q8IUG1 177 aa12.17□□□□□ -0.46
PDE4A-201ENST00000293683 C9orf129Q5T035 196 aaKnown RBP12.16□□□□□ -0.46
PDE4A-201ENST00000293683 A0A087WYN8 130 aa12.16□□□□□ -0.46
PDE4A-201ENST00000293683 LINC00158P58513 81 aa12.16□□□□□ -0.46
PDE4A-201ENST00000293683 TRGV4A0A0C4DH28 118 aa12.15□□□□□ -0.46
PDE4A-201ENST00000293683 ACYP1P07311 99 aa12.15□□□□□ -0.46
PDE4A-201ENST00000293683 RPL28P46779 137 aaKnown RBP12.15□□□□□ -0.46
PDE4A-201ENST00000293683 TRAV13-2A0A0B4J235 113 aa12.15□□□□□ -0.47
PDE4A-201ENST00000293683 SMIM11BQ8TCY0 68 aa12.15□□□□□ -0.47
PDE4A-201ENST00000293683 NBEAL2Q6ZNJ1 2754 aa12.14□□□□□ -0.47
PDE4A-201ENST00000293683 PFN2P35080 140 aa12.14□□□□□ -0.47
PDE4A-201ENST00000293683 GAGE2AQ6NT46 116 aa12.14□□□□□ -0.47
PDE4A-201ENST00000293683 C5orf38Q86SI9 138 aa12.14□□□□□ -0.47
PDE4A-201ENST00000293683 C16orf74Q96GX8 76 aa12.14□□□□□ -0.47
PDE4A-201ENST00000293683 C11orf68Q9H3H3 251 aaKnown RBP12.14□□□□□ -0.47
PDE4A-201ENST00000293683 GCN1Q92616 2671 aaKnown RBP12.14□□□□□ -0.47
PDE4A-201ENST00000293683 CCL18P55774 89 aa12.14□□□□□ -0.47
PDE4A-201ENST00000293683 IGHV3OR16-9A0A0B4J2B5 98 aa12.13□□□□□ -0.47
PDE4A-201ENST00000293683 TRBV6-4A0A1B0GX49 114 aa12.13□□□□□ -0.47
PDE4A-201ENST00000293683 MALP21145 153 aa12.13□□□□□ -0.47
PDE4A-201ENST00000293683 ATP5G1P05496 136 aa12.12□□□□□ -0.47
PDE4A-201ENST00000293683 TRBV6-8A0A0A6YYG3 113 aa12.12□□□□□ -0.47
PDE4A-201ENST00000293683 WFDC11Q8NEX6 87 aa12.12□□□□□ -0.47
PDE4A-201ENST00000293683 FHL2Q14192 279 aa12.11□□□□□ -0.47
PDE4A-201ENST00000293683 FAM222AQ5U5X8 452 aa12.11□□□□□ -0.47
PDE4A-201ENST00000293683 LINC00643Q86TS7 51 aa12.11□□□□□ -0.47
PDE4A-201ENST00000293683 CSNK1G2-AS1Q8NCQ2 148 aa12.11□□□□□ -0.47
PDE4A-201ENST00000293683 C19orf73Q9NVV2 129 aa12.11□□□□□ -0.47
PDE4A-201ENST00000293683 PF4P02776 101 aa12.1□□□□□ -0.47
PDE4A-201ENST00000293683 TENM4Q6N022 2769 aa12.1□□□□□ -0.47
PDE4A-201ENST00000293683 SDIM1Q6ZPB5 146 aa12.1□□□□□ -0.47
PDE4A-201ENST00000293683 TMEM86BQ8N661 226 aa12.1□□□□□ -0.47
PDE4A-201ENST00000293683 SVIPQ8NHG7 77 aa12.09□□□□□ -0.47
PDE4A-201ENST00000293683 PPDPFQ9H3Y8 114 aa12.09□□□□□ -0.47
PDE4A-201ENST00000293683 SMIM20Q8N5G0 67 aa12.08□□□□□ -0.48
PDE4A-201ENST00000293683 C14orf132Q9NPU4 83 aa12.08□□□□□ -0.48
PDE4A-201ENST00000293683 OVOL2Q9BRP0 275 aa12.08□□□□□ -0.48
PDE4A-201ENST00000293683 IMUPQ9GZP8 106 aa12.08□□□□□ -0.48
PDE4A-201ENST00000293683 ANK3Q12955 4377 aaKnown RBP12.07□□□□□ -0.48
PDE4A-201ENST00000293683 A0A087WZ39 114 aa12.07□□□□□ -0.48
PDE4A-201ENST00000293683 DNAL4O96015 105 aa12.07□□□□□ -0.48
PDE4A-201ENST00000293683 DEFB130BP0DP73 79 aa12.07□□□□□ -0.48
PDE4A-201ENST00000293683 DEFB130AP0DP74 79 aa12.07□□□□□ -0.48
PDE4A-201ENST00000293683 LRRC75A-AS1Q8N1F1 130 aa12.07□□□□□ -0.48
PDE4A-201ENST00000293683 PAX4O43316 350 aa12.07□□□□□ -0.48
PDE4A-201ENST00000293683 INAFM2P0DMQ5 153 aa12.07□□□□□ -0.48
PDE4A-201ENST00000293683 CLPSL2Q6UWE3 100 aa12.07□□□□□ -0.48
PDE4A-201ENST00000293683 LINC01006Q8NI28 216 aa12.07□□□□□ -0.48
PDE4A-201ENST00000293683 LECT2O14960 151 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms