RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 TRAV25A0A0B4J276 109 aa9.4□□□□□ -0.9
SLC28A1-201ENST00000286749 UBE2L6O14933 153 aa9.4□□□□□ -0.9
SLC28A1-201ENST00000286749 SETXQ7Z333 2677 aaKnown RBP9.4□□□□□ -0.91
SLC28A1-201ENST00000286749 JMJD1CQ15652 2540 aa9.4□□□□□ -0.91
SLC28A1-201ENST00000286749 AKAP9Q99996 3911 aa9.4□□□□□ -0.91
SLC28A1-201ENST00000286749 SONP18583 2426 aaKnown RBP9.4□□□□□ -0.91
SLC28A1-201ENST00000286749 HERV-K104P63124 156 aa9.39□□□□□ -0.91
SLC28A1-201ENST00000286749 TMEM243Q9BU79 118 aa9.39□□□□□ -0.91
SLC28A1-201ENST00000286749 NF1P21359 2839 aa9.39□□□□□ -0.91
SLC28A1-201ENST00000286749 GCN1Q92616 2671 aaKnown RBP9.39□□□□□ -0.91
SLC28A1-201ENST00000286749 LOC100131303A0A0U1RQF7 123 aa9.38□□□□□ -0.91
SLC28A1-201ENST00000286749 FAM218AQ96MZ4 157 aa9.38□□□□□ -0.91
SLC28A1-201ENST00000286749 FASNP49327 2511 aaKnown RBP9.38□□□□□ -0.91
SLC28A1-201ENST00000286749 CUBNO60494 3623 aa9.38□□□□□ -0.91
SLC28A1-201ENST00000286749 TRACP01848 142 aa9.37□□□□□ -0.91
SLC28A1-201ENST00000286749 DEFB113Q30KQ7 82 aa9.37□□□□□ -0.91
SLC28A1-201ENST00000286749 NIPBLQ6KC79 2804 aaeCLIP9.37□□□□□ -0.91
SLC28A1-201ENST00000286749 CCL24O00175 119 aa9.37□□□□□ -0.91
SLC28A1-201ENST00000286749 IGKV3OR2-268A0A0C4DH90 116 aa9.36□□□□□ -0.91
SLC28A1-201ENST00000286749 TRBV7-7A0A0K0K1E9 115 aa9.36□□□□□ -0.91
SLC28A1-201ENST00000286749 BAALC-AS2P0C853 105 aa9.36□□□□□ -0.91
SLC28A1-201ENST00000286749 TRGV2A0A075B6R0 118 aa9.36□□□□□ -0.91
SLC28A1-201ENST00000286749 TOMM7Q9P0U1 55 aa9.36□□□□□ -0.91
SLC28A1-201ENST00000286749 SETD2Q9BYW2 2564 aaPredicted RBP9.36□□□□□ -0.91
SLC28A1-201ENST00000286749 ACYP1P07311 99 aa9.35□□□□□ -0.91
SLC28A1-201ENST00000286749 GIG44P09565 113 aaPredicted RBP9.35□□□□□ -0.91
SLC28A1-201ENST00000286749 COX7B2Q8TF08 81 aa9.35□□□□□ -0.91
SLC28A1-201ENST00000286749 WFDC10AQ9H1F0 79 aa9.35□□□□□ -0.91
SLC28A1-201ENST00000286749 PLAC8L1A1L4L8 177 aa9.35□□□□□ -0.91
SLC28A1-201ENST00000286749 MIR7-3HGQ8N6C7 128 aa9.35□□□□□ -0.91
SLC28A1-201ENST00000286749 SMCR5Q8TEV8 140 aa9.35□□□□□ -0.91
SLC28A1-201ENST00000286749 CHCHD5Q9BSY4 110 aa9.35□□□□□ -0.91
SLC28A1-201ENST00000286749 C22orf24Q9Y442 160 aa9.35□□□□□ -0.91
SLC28A1-201ENST00000286749 DNAJC9-AS1A6NH13 148 aa9.35□□□□□ -0.91
SLC28A1-201ENST00000286749 ITPR3Q14573 2671 aa9.34□□□□□ -0.91
SLC28A1-201ENST00000286749 CRPP02741 224 aa9.34□□□□□ -0.91
SLC28A1-201ENST00000286749 HIST2H2BCQ6DN03 193 aa9.34□□□□□ -0.91
SLC28A1-201ENST00000286749 Q9HAA7 133 aa9.34□□□□□ -0.91
SLC28A1-201ENST00000286749 RPL35AP18077 110 aaKnown RBP9.34□□□□□ -0.91
SLC28A1-201ENST00000286749 LINC00337Q8N6G1 96 aa9.34□□□□□ -0.91
SLC28A1-201ENST00000286749 TRAV13-2A0A0B4J235 113 aa9.33□□□□□ -0.92
SLC28A1-201ENST00000286749 PLA2G2AP14555 144 aa9.33□□□□□ -0.92
SLC28A1-201ENST00000286749 C16orf74Q96GX8 76 aa9.33□□□□□ -0.92
SLC28A1-201ENST00000286749 PPDPFQ9H3Y8 114 aa9.33□□□□□ -0.92
SLC28A1-201ENST00000286749 SND1-IT1Q9HBX3 110 aa9.33□□□□□ -0.92
SLC28A1-201ENST00000286749 ZNF469Q96JG9 3925 aaPredicted RBP9.33□□□□□ -0.92
SLC28A1-201ENST00000286749 IGKV2-28A0A075B6P5 120 aa9.33□□□□□ -0.92
SLC28A1-201ENST00000286749 IGKV2D-28P01615 120 aa9.33□□□□□ -0.92
SLC28A1-201ENST00000286749 RPL28P46779 137 aaKnown RBP9.33□□□□□ -0.92
SLC28A1-201ENST00000286749 IGLV4-60A0A075B6I1 120 aa9.32□□□□□ -0.92
SLC28A1-201ENST00000286749 TRGV4A0A0C4DH28 118 aa9.32□□□□□ -0.92
SLC28A1-201ENST00000286749 TMEM86BQ8N661 226 aa9.32□□□□□ -0.92
SLC28A1-201ENST00000286749 PF4P02776 101 aa9.32□□□□□ -0.92
SLC28A1-201ENST00000286749 LINC00158P58513 81 aa9.32□□□□□ -0.92
SLC28A1-201ENST00000286749 FAM222AQ5U5X8 452 aa9.32□□□□□ -0.92
SLC28A1-201ENST00000286749 TRBV6-4A0A1B0GX49 114 aa9.31□□□□□ -0.92
SLC28A1-201ENST00000286749 KRTAP1-3Q8IUG1 177 aa9.31□□□□□ -0.92
SLC28A1-201ENST00000286749 FAM236AA0A1B0GUQ0 79 aa9.31□□□□□ -0.92
SLC28A1-201ENST00000286749 FAM236BA0A1B0GV22 79 aa9.31□□□□□ -0.92
SLC28A1-201ENST00000286749 LRRC75A-AS1Q8N1F1 130 aa9.31□□□□□ -0.92
SLC28A1-201ENST00000286749 ESM1Q9NQ30 184 aa9.31□□□□□ -0.92
SLC28A1-201ENST00000286749 APCP25054 2843 aa9.31□□□□□ -0.92
SLC28A1-201ENST00000286749 MALP21145 153 aa9.3□□□□□ -0.92
SLC28A1-201ENST00000286749 LINC00643Q86TS7 51 aa9.3□□□□□ -0.92
SLC28A1-201ENST00000286749 NBPF19A0A087WUL8 3843 aa9.29□□□□□ -0.92
SLC28A1-201ENST00000286749 SMIM11BQ8TCY0 68 aa9.29□□□□□ -0.92
SLC28A1-201ENST00000286749 TRBV6-8A0A0A6YYG3 113 aa9.29□□□□□ -0.92
SLC28A1-201ENST00000286749 IGHV3OR16-9A0A0B4J2B5 98 aa9.29□□□□□ -0.92
SLC28A1-201ENST00000286749 J3QKU1 62 aa9.29□□□□□ -0.92
SLC28A1-201ENST00000286749 CCL18P55774 89 aa9.29□□□□□ -0.92
SLC28A1-201ENST00000286749 GAGE2AQ6NT46 116 aa9.29□□□□□ -0.92
SLC28A1-201ENST00000286749 IMUPQ9GZP8 106 aa9.29□□□□□ -0.92
SLC28A1-201ENST00000286749 CCDC168Q8NDH2 2452 aa9.29□□□□□ -0.92
SLC28A1-201ENST00000286749 A0A087WYN8 130 aa9.28□□□□□ -0.92
SLC28A1-201ENST00000286749 C5orf38Q86SI9 138 aa9.28□□□□□ -0.92
SLC28A1-201ENST00000286749 FLNAP21333 2647 aaKnown RBP9.28□□□□□ -0.92
SLC28A1-201ENST00000286749 INAFM2P0DMQ5 153 aa9.28□□□□□ -0.92
SLC28A1-201ENST00000286749 PFN2P35080 140 aa9.28□□□□□ -0.92
SLC28A1-201ENST00000286749 CSNK1G2-AS1Q8NCQ2 148 aa9.28□□□□□ -0.92
SLC28A1-201ENST00000286749 OVOL2Q9BRP0 275 aa9.28□□□□□ -0.92
SLC28A1-201ENST00000286749 FHL2Q14192 279 aa9.27□□□□□ -0.93
SLC28A1-201ENST00000286749 SDIM1Q6ZPB5 146 aa9.27□□□□□ -0.93
SLC28A1-201ENST00000286749 C19orf73Q9NVV2 129 aa9.27□□□□□ -0.93
SLC28A1-201ENST00000286749 DNAL4O96015 105 aa9.27□□□□□ -0.93
SLC28A1-201ENST00000286749 SVIPQ8NHG7 77 aa9.27□□□□□ -0.93
SLC28A1-201ENST00000286749 CMC4P56277 68 aaPredicted RBP9.26□□□□□ -0.93
SLC28A1-201ENST00000286749 C3orf56Q8N813 242 aa9.26□□□□□ -0.93
SLC28A1-201ENST00000286749 C11orf68Q9H3H3 251 aaKnown RBP9.26□□□□□ -0.93
SLC28A1-201ENST00000286749 A0A087WZ39 114 aa9.26□□□□□ -0.93
SLC28A1-201ENST00000286749 IBA57-AS1B1ANH7 110 aa9.25□□□□□ -0.93
SLC28A1-201ENST00000286749 ATP5G1P05496 136 aa9.25□□□□□ -0.93
SLC28A1-201ENST00000286749 WFDC11Q8NEX6 87 aa9.25□□□□□ -0.93
SLC28A1-201ENST00000286749 C9orf129Q5T035 196 aaKnown RBP9.25□□□□□ -0.93
SLC28A1-201ENST00000286749 PAX4O43316 350 aa9.24□□□□□ -0.93
SLC28A1-201ENST00000286749 IGLV1-51P01701 117 aa9.24□□□□□ -0.93
SLC28A1-201ENST00000286749 LINC01006Q8NI28 216 aa9.24□□□□□ -0.93
SLC28A1-201ENST00000286749 OR13C6PQ8NH95 151 aa9.23□□□□□ -0.93
SLC28A1-201ENST00000286749 LINC00959A0A1B0GUT2 108 aa9.23□□□□□ -0.93
SLC28A1-201ENST00000286749 DEFB130BP0DP73 79 aa9.23□□□□□ -0.93
SLC28A1-201ENST00000286749 DEFB130AP0DP74 79 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms