RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 CYSRT1A8MQ03 144 aa13.87□□□□□ -0.19
LSM11-201ENST00000286307 UPK3BQ9BT76 320 aa13.87□□□□□ -0.19
LSM11-201ENST00000286307 JMJD1CQ15652 2540 aa13.87□□□□□ -0.19
LSM11-201ENST00000286307 USP17L23D6RBM5 183 aa13.87□□□□□ -0.19
LSM11-201ENST00000286307 TET2Q6N021 2002 aaPredicted RBP13.87□□□□□ -0.19
LSM11-201ENST00000286307 FHL2Q14192 279 aa13.87□□□□□ -0.19
LSM11-201ENST00000286307 PYGO1Q9Y3Y4 419 aa13.86□□□□□ -0.19
LSM11-201ENST00000286307 SEC61GP60059 68 aa13.86□□□□□ -0.19
LSM11-201ENST00000286307 COA6Q5JTJ3 125 aaKnown RBP13.86□□□□□ -0.19
LSM11-201ENST00000286307 PDE6GP18545 87 aa13.86□□□□□ -0.19
LSM11-201ENST00000286307 RPL28P46779 137 aaKnown RBP13.85□□□□□ -0.19
LSM11-201ENST00000286307 CIRBP-AS1Q8TBR5 109 aa13.85□□□□□ -0.19
LSM11-201ENST00000286307 TLN1Q9Y490 2541 aaKnown RBP13.85□□□□□ -0.19
LSM11-201ENST00000286307 MDFIQ99750 246 aa13.85□□□□□ -0.19
LSM11-201ENST00000286307 ZFYVE26Q68DK2 2539 aa13.85□□□□□ -0.19
LSM11-201ENST00000286307 LINC01556Q5JQF7 62 aa13.84□□□□□ -0.19
LSM11-201ENST00000286307 LRRK2Q5S007 2527 aa13.84□□□□□ -0.19
LSM11-201ENST00000286307 WFDC10BQ8IUB3 73 aa13.84□□□□□ -0.19
LSM11-201ENST00000286307 DHRS4-AS1Q9P1J3 65 aa13.84□□□□□ -0.19
LSM11-201ENST00000286307 C1orf137Q5JT78 98 aa13.83□□□□□ -0.2
LSM11-201ENST00000286307 SPATA12Q7Z6I5 190 aa13.83□□□□□ -0.2
LSM11-201ENST00000286307 NRACQ8N912 160 aa13.83□□□□□ -0.2
LSM11-201ENST00000286307 SCXQ7RTU7 201 aa13.83□□□□□ -0.2
LSM11-201ENST00000286307 CDC42SE2Q9NRR3 84 aa13.83□□□□□ -0.2
LSM11-201ENST00000286307 COL4A2P08572 1712 aa13.83□□□□□ -0.2
LSM11-201ENST00000286307 WDR87Q6ZQQ6 2873 aa13.82□□□□□ -0.2
LSM11-201ENST00000286307 RNASE8Q8TDE3 154 aaKnown RBP13.81□□□□□ -0.2
LSM11-201ENST00000286307 C3orf84H3BNL1 204 aa13.81□□□□□ -0.2
LSM11-201ENST00000286307 UNQ6190/PRO20217Q6UXQ8 127 aa13.8□□□□□ -0.2
LSM11-201ENST00000286307 LYPD5Q6UWN5 251 aa13.8□□□□□ -0.2
LSM11-201ENST00000286307 ZNF580Q9UK33 172 aa13.8□□□□□ -0.2
LSM11-201ENST00000286307 MRPS36P82909 103 aaKnown RBP13.8□□□□□ -0.2
LSM11-201ENST00000286307 C9orf116Q5BN46 136 aaPredicted RBP13.78□□□□□ -0.2
LSM11-201ENST00000286307 CHCHD7Q9BUK0 85 aa13.78□□□□□ -0.2
LSM11-201ENST00000286307 SS18L2Q9UHA2 77 aa13.78□□□□□ -0.2
LSM11-201ENST00000286307 CELA1Q9UNI1 258 aa13.78□□□□□ -0.2
LSM11-201ENST00000286307 SBSPONQ8IVN8 264 aa13.77□□□□□ -0.2
LSM11-201ENST00000286307 IGLV4-60A0A075B6I1 120 aa13.77□□□□□ -0.21
LSM11-201ENST00000286307 GAS8-AS1O95177 125 aa13.77□□□□□ -0.21
LSM11-201ENST00000286307 Q8IZM0 81 aa13.77□□□□□ -0.21
LSM11-201ENST00000286307 CCKP06307 115 aa13.77□□□□□ -0.21
LSM11-201ENST00000286307 COX6A2Q02221 97 aa13.77□□□□□ -0.21
LSM11-201ENST00000286307 TCL1BO95988 128 aa13.76□□□□□ -0.21
LSM11-201ENST00000286307 Q8N2B8 174 aa13.76□□□□□ -0.21
LSM11-201ENST00000286307 PTPRBP23467 1997 aa13.76□□□□□ -0.21
LSM11-201ENST00000286307 COX17Q14061 63 aa13.76□□□□□ -0.21
LSM11-201ENST00000286307 WFDC2Q14508 124 aa13.76□□□□□ -0.21
LSM11-201ENST00000286307 H3BT86 120 aa13.76□□□□□ -0.21
LSM11-201ENST00000286307 POLR2KP53803 58 aaKnown RBP13.75□□□□□ -0.21
LSM11-201ENST00000286307 MRPS12O15235 138 aaKnown RBP13.74□□□□□ -0.21
LSM11-201ENST00000286307 REG3GQ6UW15 175 aa13.74□□□□□ -0.21
LSM11-201ENST00000286307 TEN1Q86WV5 123 aa13.74□□□□□ -0.21
LSM11-201ENST00000286307 C10orf25Q5T742 122 aa13.74□□□□□ -0.21
LSM11-201ENST00000286307 TRBV30A0A0K0K1B3 111 aa13.74□□□□□ -0.21
LSM11-201ENST00000286307 Q6ZQY7 126 aa13.74□□□□□ -0.21
LSM11-201ENST00000286307 ANKRD11Q6UB99 2663 aaPredicted RBP13.73□□□□□ -0.21
LSM11-201ENST00000286307 ZNF73O43830 326 aaPredicted RBP13.73□□□□□ -0.21
LSM11-201ENST00000286307 MAPKAPK5-AS1Q8N8E1 139 aa13.72□□□□□ -0.21
LSM11-201ENST00000286307 SPTBN4Q9H254 2564 aa13.72□□□□□ -0.21
LSM11-201ENST00000286307 EGFEM1PQ0D2K5 195 aa13.71□□□□□ -0.21
LSM11-201ENST00000286307 PTH2Q96A98 100 aa13.71□□□□□ -0.21
LSM11-201ENST00000286307 LINC00694P0DN24 101 aa13.71□□□□□ -0.22
LSM11-201ENST00000286307 TMEM258P61165 79 aa13.7□□□□□ -0.22
LSM11-201ENST00000286307 ZNF462Q96JM2 2506 aa13.7□□□□□ -0.22
LSM11-201ENST00000286307 ABCA12Q86UK0 2595 aa13.7□□□□□ -0.22
LSM11-201ENST00000286307 TEX49A0A1B0GTD5 131 aa13.7□□□□□ -0.22
LSM11-201ENST00000286307 BEAN1Q3B7T3 259 aa13.69□□□□□ -0.22
LSM11-201ENST00000286307 POM121L12Q8N7R1 296 aa13.69□□□□□ -0.22
LSM11-201ENST00000286307 CHD8Q9HCK8 2581 aa13.69□□□□□ -0.22
LSM11-201ENST00000286307 FAM236AA0A1B0GUQ0 79 aa13.69□□□□□ -0.22
LSM11-201ENST00000286307 FAM236BA0A1B0GV22 79 aa13.69□□□□□ -0.22
LSM11-201ENST00000286307 Q6ZSN1 163 aa13.68□□□□□ -0.22
LSM11-201ENST00000286307 DOPEY1Q5JWR5 2465 aa13.68□□□□□ -0.22
LSM11-201ENST00000286307 MUC7Q8TAX7 377 aa13.67□□□□□ -0.22
LSM11-201ENST00000286307 SMIM11BQ8TCY0 68 aa13.67□□□□□ -0.22
LSM11-201ENST00000286307 LINC00242Q5T6M2 205 aa13.66□□□□□ -0.22
LSM11-201ENST00000286307 TRIAP1O43715 76 aa13.66□□□□□ -0.22
LSM11-201ENST00000286307 CENPFP49454 3210 aa13.66□□□□□ -0.22
LSM11-201ENST00000286307 ATOX1O00244 68 aa13.65□□□□□ -0.22
LSM11-201ENST00000286307 WWC2-AS2Q96NR7 200 aa13.64□□□□□ -0.23
LSM11-201ENST00000286307 TAX1BP3O14907 124 aa13.64□□□□□ -0.23
LSM11-201ENST00000286307 WFDC13Q8IUB5 93 aa13.64□□□□□ -0.23
LSM11-201ENST00000286307 XGP55808 180 aa13.63□□□□□ -0.23
LSM11-201ENST00000286307 AGRNO00468 2067 aa13.63□□□□□ -0.23
LSM11-201ENST00000286307 TIMM17BO60830 172 aa13.63□□□□□ -0.23
LSM11-201ENST00000286307 FN1P02751 2386 aaKnown RBP13.62□□□□□ -0.23
LSM11-201ENST00000286307 TP73-AS1Q9UF72 201 aa13.61□□□□□ -0.23
LSM11-201ENST00000286307 PRR3P79522 188 aaKnown RBP13.61□□□□□ -0.23
LSM11-201ENST00000286307 C16orf90A8MZG2 172 aa13.61□□□□□ -0.23
LSM11-201ENST00000286307 FAM229AH3BQW9 127 aa13.61□□□□□ -0.23
LSM11-201ENST00000286307 CEP295Q9C0D2 2601 aa13.6□□□□□ -0.23
LSM11-201ENST00000286307 TRBV10-3A0A0K0K1G6 114 aa13.6□□□□□ -0.23
LSM11-201ENST00000286307 MRPL55Q7Z7F7 128 aaKnown RBP13.6□□□□□ -0.23
LSM11-201ENST00000286307 MYO9AB2RTY4 2548 aa13.6□□□□□ -0.23
LSM11-201ENST00000286307 ESRGQ1W209 222 aa13.59□□□□□ -0.23
LSM11-201ENST00000286307 ENHOQ6UWT2 76 aa13.59□□□□□ -0.23
LSM11-201ENST00000286307 SDIM1Q6ZPB5 146 aa13.59□□□□□ -0.23
LSM11-201ENST00000286307 SMIM20Q8N5G0 67 aa13.59□□□□□ -0.23
LSM11-201ENST00000286307 FAM236DA0A1B0GTK5 79 aa13.58□□□□□ -0.23
LSM11-201ENST00000286307 NDUFC2-KCTD14E9PQ53 114 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms