RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 ANKRD29Q8N6D5 301 aa17.81■□□□□ 0.44
ROM1-201ENST00000278833 SMIM1B2RUZ4 78 aa17.8■□□□□ 0.44
ROM1-201ENST00000278833 TRIAP1O43715 76 aa17.8■□□□□ 0.44
ROM1-201ENST00000278833 PRSS2P07478 247 aa17.8■□□□□ 0.44
ROM1-201ENST00000278833 NOP10Q9NPE3 64 aaKnown RBP17.8■□□□□ 0.44
ROM1-201ENST00000278833 ICOSQ9Y6W8 199 aa17.8■□□□□ 0.44
ROM1-201ENST00000278833 CIRBPQ14011 172 aaKnown RBP17.8■□□□□ 0.44
ROM1-201ENST00000278833 CDIP1Q9H305 208 aa17.8■□□□□ 0.44
ROM1-201ENST00000278833 LINC01620Q4KN68 170 aa17.79■□□□□ 0.44
ROM1-201ENST00000278833 COPS9Q8WXC6 57 aa17.79■□□□□ 0.44
ROM1-201ENST00000278833 TMEM243Q9BU79 118 aa17.78■□□□□ 0.44
ROM1-201ENST00000278833 COL6A5A8TX70 2615 aa17.78■□□□□ 0.44
ROM1-201ENST00000278833 C9JAW5 83 aa17.78■□□□□ 0.44
ROM1-201ENST00000278833 GAGE12JA6NER3 117 aa17.77■□□□□ 0.43
ROM1-201ENST00000278833 F5H768 121 aa17.77■□□□□ 0.43
ROM1-201ENST00000278833 GAGE4Q13068 117 aa17.77■□□□□ 0.43
ROM1-201ENST00000278833 GAGE5Q13069 117 aa17.77■□□□□ 0.43
ROM1-201ENST00000278833 H7C2G1 150 aa17.76■□□□□ 0.43
ROM1-201ENST00000278833 KRTAP24-1Q3LI83 254 aa17.75■□□□□ 0.43
ROM1-201ENST00000278833 ZNF625Q96I27 306 aaPredicted RBP17.75■□□□□ 0.43
ROM1-201ENST00000278833 TRBV10-2A0A0K0K1G8 114 aa17.75■□□□□ 0.43
ROM1-201ENST00000278833 HERV-K104P63124 156 aa17.75■□□□□ 0.43
ROM1-201ENST00000278833 COX6CP09669 75 aa17.74■□□□□ 0.43
ROM1-201ENST00000278833 Q9H8V8 135 aa17.74■□□□□ 0.43
ROM1-201ENST00000278833 RPL13AP40429 203 aaKnown RBP17.73■□□□□ 0.43
ROM1-201ENST00000278833 LINC00308Q8TCZ7 52 aa17.72■□□□□ 0.43
ROM1-201ENST00000278833 UBE2L6O14933 153 aa17.71■□□□□ 0.43
ROM1-201ENST00000278833 WFDC10AQ9H1F0 79 aa17.71■□□□□ 0.43
ROM1-201ENST00000278833 TRGV2A0A075B6R0 118 aa17.71■□□□□ 0.43
ROM1-201ENST00000278833 TMEM262E9PQX1 116 aa17.71■□□□□ 0.43
ROM1-201ENST00000278833 GAGE7O76087 117 aa17.71■□□□□ 0.43
ROM1-201ENST00000278833 GAGE12FP0CL80 117 aa17.71■□□□□ 0.43
ROM1-201ENST00000278833 GAGE12GP0CL81 117 aa17.71■□□□□ 0.43
ROM1-201ENST00000278833 GAGE12IP0CL82 117 aa17.71■□□□□ 0.43
ROM1-201ENST00000278833 H3BT86 120 aa17.7■□□□□ 0.42
ROM1-201ENST00000278833 RPL35AP18077 110 aaKnown RBP17.7■□□□□ 0.42
ROM1-201ENST00000278833 TRAV13-1A0A0B4J241 112 aa17.69■□□□□ 0.42
ROM1-201ENST00000278833 LST1O00453 97 aa17.69■□□□□ 0.42
ROM1-201ENST00000278833 LINC00612Q8N6U2 182 aa17.68■□□□□ 0.42
ROM1-201ENST00000278833 FHL2Q14192 279 aa17.67■□□□□ 0.42
ROM1-201ENST00000278833 MDFIQ99750 246 aa17.67■□□□□ 0.42
ROM1-201ENST00000278833 KIR2DL5BQ8NHK3 375 aa17.66■□□□□ 0.42
ROM1-201ENST00000278833 TRGV4A0A0C4DH28 118 aa17.65■□□□□ 0.42
ROM1-201ENST00000278833 TENM1Q9UKZ4 2725 aa17.65■□□□□ 0.42
ROM1-201ENST00000278833 NPC2P61916 151 aa17.65■□□□□ 0.42
ROM1-201ENST00000278833 KRTAP21-3Q3LHN1 58 aa17.65■□□□□ 0.42
ROM1-201ENST00000278833 DAND5Q8N907 189 aa17.63■□□□□ 0.41
ROM1-201ENST00000278833 TRBV6-8A0A0A6YYG3 113 aa17.63■□□□□ 0.41
ROM1-201ENST00000278833 LOC100131303A0A0U1RQF7 123 aa17.63■□□□□ 0.41
ROM1-201ENST00000278833 STAB1Q9NY15 2570 aa17.62■□□□□ 0.41
ROM1-201ENST00000278833 SOSTDC1Q6X4U4 206 aa17.62■□□□□ 0.41
ROM1-201ENST00000278833 NTN5Q8WTR8 489 aaPredicted RBP17.62■□□□□ 0.41
ROM1-201ENST00000278833 XGP55808 180 aa17.61■□□□□ 0.41
ROM1-201ENST00000278833 SHISA2Q6UWI4 295 aa17.61■□□□□ 0.41
ROM1-201ENST00000278833 WNK1Q9H4A3 2382 aa17.6■□□□□ 0.41
ROM1-201ENST00000278833 LINC00482Q8N8I6 264 aa17.6■□□□□ 0.41
ROM1-201ENST00000278833 MEIG1Q5JSS6 88 aa17.59■□□□□ 0.41
ROM1-201ENST00000278833 C2orf82Q6UX34 121 aa17.58■□□□□ 0.41
ROM1-201ENST00000278833 UBE2WQ96B02 151 aa17.58■□□□□ 0.41
ROM1-201ENST00000278833 FAM222AQ5U5X8 452 aa17.58■□□□□ 0.4
ROM1-201ENST00000278833 COX7A2LO14548 114 aa17.57■□□□□ 0.4
ROM1-201ENST00000278833 DEFB121Q5J5C9 76 aa17.57■□□□□ 0.4
ROM1-201ENST00000278833 MT-ATP8P03928 68 aa17.56■□□□□ 0.4
ROM1-201ENST00000278833 COX7B2Q8TF08 81 aa17.56■□□□□ 0.4
ROM1-201ENST00000278833 SMIM9A6NGZ8 99 aa17.56■□□□□ 0.4
ROM1-201ENST00000278833 PF4P02776 101 aa17.56■□□□□ 0.4
ROM1-201ENST00000278833 CLEC2BQ92478 149 aa17.56■□□□□ 0.4
ROM1-201ENST00000278833 KRTAP10-3P60369 221 aa17.55■□□□□ 0.4
ROM1-201ENST00000278833 GAGE6Q13070 117 aa17.55■□□□□ 0.4
ROM1-201ENST00000278833 IGHV3OR16-9A0A0B4J2B5 98 aa17.54■□□□□ 0.4
ROM1-201ENST00000278833 A0A1B0GV72 72 aa17.53■□□□□ 0.4
ROM1-201ENST00000278833 IGLV4-60A0A075B6I1 120 aa17.52■□□□□ 0.4
ROM1-201ENST00000278833 A0A087WZ39 114 aa17.52■□□□□ 0.4
ROM1-201ENST00000278833 TEX49A0A1B0GTD5 131 aa17.5■□□□□ 0.39
ROM1-201ENST00000278833 CHCHD5Q9BSY4 110 aa17.5■□□□□ 0.39
ROM1-201ENST00000278833 FAM240AA0A1B0GVK7 77 aa17.5■□□□□ 0.39
ROM1-201ENST00000278833 X6R8D5 127 aa17.5■□□□□ 0.39
ROM1-201ENST00000278833 TRAV13-2A0A0B4J235 113 aa17.48■□□□□ 0.39
ROM1-201ENST00000278833 A0A1B0GUV1 79 aa17.48■□□□□ 0.39
ROM1-201ENST00000278833 TRACP01848 142 aa17.48■□□□□ 0.39
ROM1-201ENST00000278833 LINC01561Q8N1V8 128 aa17.48■□□□□ 0.39
ROM1-201ENST00000278833 CITED1Q99966 193 aa17.48■□□□□ 0.39
ROM1-201ENST00000278833 TRAV8-4A0A0B4J246 113 aa17.48■□□□□ 0.39
ROM1-201ENST00000278833 IBA57-AS1B1ANH7 110 aa17.47■□□□□ 0.39
ROM1-201ENST00000278833 ANK2Q01484 3957 aa17.47■□□□□ 0.39
ROM1-201ENST00000278833 A0A0U1RRA0 63 aa17.46■□□□□ 0.39
ROM1-201ENST00000278833 MRPL23Q16540 153 aaKnown RBP17.46■□□□□ 0.39
ROM1-201ENST00000278833 C3orf56Q8N813 242 aa17.46■□□□□ 0.39
ROM1-201ENST00000278833 LINC00959A0A1B0GUT2 108 aa17.44■□□□□ 0.38
ROM1-201ENST00000278833 LYRM9A8MSI8 78 aa17.44■□□□□ 0.38
ROM1-201ENST00000278833 RPL28P46779 137 aaKnown RBP17.44■□□□□ 0.38
ROM1-201ENST00000278833 C9orf66Q5T8R8 295 aa17.44■□□□□ 0.38
ROM1-201ENST00000278833 MIR7-3HGQ8N6C7 128 aa17.44■□□□□ 0.38
ROM1-201ENST00000278833 PRO0255Q9UI72 69 aa17.44■□□□□ 0.38
ROM1-201ENST00000278833 DNHD1Q96M86 4753 aa17.43■□□□□ 0.38
ROM1-201ENST00000278833 TRAV26-1A0A087WT03 109 aa17.42■□□□□ 0.38
ROM1-201ENST00000278833 GYPEP15421 78 aa17.42■□□□□ 0.38
ROM1-201ENST00000278833 CRPP02741 224 aa17.41■□□□□ 0.38
ROM1-201ENST00000278833 DEFB130BP0DP73 79 aa17.41■□□□□ 0.38
ROM1-201ENST00000278833 DEFB130AP0DP74 79 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms