RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 RNASE13Q5GAN3 156 aaKnown RBP9.26□□□□□ -0.93
C9orf3-201ENST00000277198 DAZ4Q86SG3 579 aaKnown RBP9.26□□□□□ -0.93
C9orf3-201ENST00000277198 DAZ3Q9NR90 486 aaKnown RBP9.26□□□□□ -0.93
C9orf3-201ENST00000277198 IGLV5-39A0A0G2JS06 123 aa9.25□□□□□ -0.93
C9orf3-201ENST00000277198 H7C2G1 150 aa9.25□□□□□ -0.93
C9orf3-201ENST00000277198 TRIAP1O43715 76 aa9.25□□□□□ -0.93
C9orf3-201ENST00000277198 CDKN2A-AS1Q9UH64 79 aa9.25□□□□□ -0.93
C9orf3-201ENST00000277198 ICOSQ9Y6W8 199 aa9.25□□□□□ -0.93
C9orf3-201ENST00000277198 SORL1Q92673 2214 aa9.24□□□□□ -0.93
C9orf3-201ENST00000277198 RPL36AP83881 106 aaKnown RBP9.24□□□□□ -0.93
C9orf3-201ENST00000277198 C1orf158Q8N1D5 194 aa9.24□□□□□ -0.93
C9orf3-201ENST00000277198 RPL36ALQ969Q0 106 aaKnown RBP9.24□□□□□ -0.93
C9orf3-201ENST00000277198 IGHV3-38A0A0C4DH36 116 aa9.24□□□□□ -0.93
C9orf3-201ENST00000277198 TMEM101Q96IK0 257 aa9.24□□□□□ -0.93
C9orf3-201ENST00000277198 PPDPFQ9H3Y8 114 aa9.24□□□□□ -0.93
C9orf3-201ENST00000277198 XCL2Q9UBD3 114 aa9.24□□□□□ -0.93
C9orf3-201ENST00000277198 PRKDCP78527 4128 aaKnown RBP9.24□□□□□ -0.93
C9orf3-201ENST00000277198 H3BT86 120 aa9.23□□□□□ -0.93
C9orf3-201ENST00000277198 XGP55808 180 aa9.23□□□□□ -0.93
C9orf3-201ENST00000277198 IGHV3OR16-12A0A075B7B8 117 aa9.23□□□□□ -0.93
C9orf3-201ENST00000277198 TRAV4A0A0B4J268 109 aa9.23□□□□□ -0.93
C9orf3-201ENST00000277198 WIPF1O43516 503 aa9.23□□□□□ -0.93
C9orf3-201ENST00000277198 NACAE9PAV3 2078 aa9.22□□□□□ -0.93
C9orf3-201ENST00000277198 TRGV1A0A0A0MS02 117 aa9.22□□□□□ -0.93
C9orf3-201ENST00000277198 K7EQD1 137 aa9.22□□□□□ -0.93
C9orf3-201ENST00000277198 MT-ATP8P03928 68 aa9.22□□□□□ -0.93
C9orf3-201ENST00000277198 LINC00242Q5T6M2 205 aa9.22□□□□□ -0.93
C9orf3-201ENST00000277198 CKS1BP61024 79 aa9.21□□□□□ -0.93
C9orf3-201ENST00000277198 FAM110AQ9BQ89 295 aa9.21□□□□□ -0.93
C9orf3-201ENST00000277198 A8MZ25 164 aa9.21□□□□□ -0.94
C9orf3-201ENST00000277198 CCL24O00175 119 aa9.21□□□□□ -0.94
C9orf3-201ENST00000277198 H7C423 109 aa9.2□□□□□ -0.94
C9orf3-201ENST00000277198 LST1O00453 97 aa9.2□□□□□ -0.94
C9orf3-201ENST00000277198 NTN5Q8WTR8 489 aaPredicted RBP9.2□□□□□ -0.94
C9orf3-201ENST00000277198 TGP01266 2768 aa9.2□□□□□ -0.94
C9orf3-201ENST00000277198 PRB2P02812 416 aaPredicted RBP9.19□□□□□ -0.94
C9orf3-201ENST00000277198 HERV-K104P63124 156 aa9.19□□□□□ -0.94
C9orf3-201ENST00000277198 COX6A2Q02221 97 aa9.19□□□□□ -0.94
C9orf3-201ENST00000277198 OXLD1Q5BKU9 147 aa9.19□□□□□ -0.94
C9orf3-201ENST00000277198 C2orf82Q6UX34 121 aa9.19□□□□□ -0.94
C9orf3-201ENST00000277198 LINC00308Q8TCZ7 52 aa9.19□□□□□ -0.94
C9orf3-201ENST00000277198 Q9H8V8 135 aa9.19□□□□□ -0.94
C9orf3-201ENST00000277198 CDC42SE2Q9NRR3 84 aa9.19□□□□□ -0.94
C9orf3-201ENST00000277198 DNAH3Q8TD57 4116 aa9.18□□□□□ -0.94
C9orf3-201ENST00000277198 SMIM1B2RUZ4 78 aa9.18□□□□□ -0.94
C9orf3-201ENST00000277198 UBE2WQ96B02 151 aa9.18□□□□□ -0.94
C9orf3-201ENST00000277198 NTM-AS1Q6ZSK4 140 aa9.17□□□□□ -0.94
C9orf3-201ENST00000277198 C16orf74Q96GX8 76 aa9.17□□□□□ -0.94
C9orf3-201ENST00000277198 LINC00694P0DN24 101 aa9.17□□□□□ -0.94
C9orf3-201ENST00000277198 Q6ZTI0 123 aa9.17□□□□□ -0.94
C9orf3-201ENST00000277198 ZNF625Q96I27 306 aaPredicted RBP9.17□□□□□ -0.94
C9orf3-201ENST00000277198 DEFB121Q5J5C9 76 aa9.16□□□□□ -0.94
C9orf3-201ENST00000277198 TEX49A0A1B0GTD5 131 aa9.15□□□□□ -0.94
C9orf3-201ENST00000277198 FAM240AA0A1B0GVK7 77 aa9.15□□□□□ -0.94
C9orf3-201ENST00000277198 TRBV6-4A0A1B0GX49 114 aa9.15□□□□□ -0.94
C9orf3-201ENST00000277198 F5H768 121 aa9.15□□□□□ -0.94
C9orf3-201ENST00000277198 MRPL23Q16540 153 aaKnown RBP9.15□□□□□ -0.94
C9orf3-201ENST00000277198 TMEM243Q9BU79 118 aa9.15□□□□□ -0.94
C9orf3-201ENST00000277198 TRAV8-4A0A0B4J246 113 aa9.15□□□□□ -0.95
C9orf3-201ENST00000277198 NPC2P61916 151 aa9.15□□□□□ -0.95
C9orf3-201ENST00000277198 Q6Q795 121 aa9.15□□□□□ -0.95
C9orf3-201ENST00000277198 OVOL2Q9BRP0 275 aa9.15□□□□□ -0.95
C9orf3-201ENST00000277198 TRAV13-1A0A0B4J241 112 aa9.14□□□□□ -0.95
C9orf3-201ENST00000277198 UBE2L6O14933 153 aa9.14□□□□□ -0.95
C9orf3-201ENST00000277198 PF4P02776 101 aa9.14□□□□□ -0.95
C9orf3-201ENST00000277198 GAGE12JA6NER3 117 aa9.13□□□□□ -0.95
C9orf3-201ENST00000277198 COX7A2LO14548 114 aa9.13□□□□□ -0.95
C9orf3-201ENST00000277198 SNCGO76070 127 aa9.13□□□□□ -0.95
C9orf3-201ENST00000277198 GAGE4Q13068 117 aa9.13□□□□□ -0.95
C9orf3-201ENST00000277198 GAGE5Q13069 117 aa9.13□□□□□ -0.95
C9orf3-201ENST00000277198 DAND5Q8N907 189 aa9.13□□□□□ -0.95
C9orf3-201ENST00000277198 NOP10Q9NPE3 64 aaKnown RBP9.13□□□□□ -0.95
C9orf3-201ENST00000277198 GIG44P09565 113 aaPredicted RBP9.13□□□□□ -0.95
C9orf3-201ENST00000277198 LINC00482Q8N8I6 264 aa9.13□□□□□ -0.95
C9orf3-201ENST00000277198 CLEC2BQ92478 149 aa9.13□□□□□ -0.95
C9orf3-201ENST00000277198 PLAC8L1A1L4L8 177 aa9.12□□□□□ -0.95
C9orf3-201ENST00000277198 WFDC9Q8NEX5 89 aa9.12□□□□□ -0.95
C9orf3-201ENST00000277198 IGLV1-51P01701 117 aa9.12□□□□□ -0.95
C9orf3-201ENST00000277198 MEIG1Q5JSS6 88 aa9.12□□□□□ -0.95
C9orf3-201ENST00000277198 TRGV2A0A075B6R0 118 aa9.11□□□□□ -0.95
C9orf3-201ENST00000277198 GAGE2BQ13066 116 aa9.11□□□□□ -0.95
C9orf3-201ENST00000277198 GAGE2EQ4V326 116 aa9.11□□□□□ -0.95
C9orf3-201ENST00000277198 KPRPQ5T749 579 aaPredicted RBP9.11□□□□□ -0.95
C9orf3-201ENST00000277198 GAGE2DQ9UEU5 116 aa9.11□□□□□ -0.95
C9orf3-201ENST00000277198 CSNK1G2-AS1Q8NCQ2 148 aa9.1□□□□□ -0.95
C9orf3-201ENST00000277198 C19orf73Q9NVV2 129 aa9.1□□□□□ -0.95
C9orf3-201ENST00000277198 TRACP01848 142 aa9.1□□□□□ -0.95
C9orf3-201ENST00000277198 FAM222AQ5U5X8 452 aa9.1□□□□□ -0.95
C9orf3-201ENST00000277198 SOSTDC1Q6X4U4 206 aa9.1□□□□□ -0.95
C9orf3-201ENST00000277198 TRAV13-2A0A0B4J235 113 aa9.09□□□□□ -0.95
C9orf3-201ENST00000277198 ACYP1P07311 99 aa9.09□□□□□ -0.95
C9orf3-201ENST00000277198 KRTAP10-11P60412 298 aa9.09□□□□□ -0.95
C9orf3-201ENST00000277198 GAGE7O76087 117 aa9.08□□□□□ -0.96
C9orf3-201ENST00000277198 GAGE12FP0CL80 117 aa9.08□□□□□ -0.96
C9orf3-201ENST00000277198 GAGE12GP0CL81 117 aa9.08□□□□□ -0.96
C9orf3-201ENST00000277198 GAGE12IP0CL82 117 aa9.08□□□□□ -0.96
C9orf3-201ENST00000277198 ANAPC13Q9BS18 74 aa9.08□□□□□ -0.96
C9orf3-201ENST00000277198 TRBV6-8A0A0A6YYG3 113 aa9.07□□□□□ -0.96
C9orf3-201ENST00000277198 TRGV4A0A0C4DH28 118 aa9.07□□□□□ -0.96
C9orf3-201ENST00000277198 COX7B2Q8TF08 81 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 630.3 ms