RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 MRPS36P82909 103 aaKnown RBP11.21□□□□□ -0.61
TIMP3-201ENST00000266085 A8MZ25 164 aa11.21□□□□□ -0.61
TIMP3-201ENST00000266085 CD164L2Q6UWJ8 174 aa11.21□□□□□ -0.61
TIMP3-201ENST00000266085 COX8CQ7Z4L0 72 aa11.21□□□□□ -0.61
TIMP3-201ENST00000266085 LELP1Q5T871 98 aa11.21□□□□□ -0.62
TIMP3-201ENST00000266085 LINC00310P59036 64 aa11.2□□□□□ -0.62
TIMP3-201ENST00000266085 UBE2D3P61077 147 aa11.2□□□□□ -0.62
TIMP3-201ENST00000266085 UBE2D2P62837 147 aa11.2□□□□□ -0.62
TIMP3-201ENST00000266085 RNF183Q96D59 192 aa11.2□□□□□ -0.62
TIMP3-201ENST00000266085 C16orf95Q9H693 158 aa11.2□□□□□ -0.62
TIMP3-201ENST00000266085 PTPRBP23467 1997 aa11.2□□□□□ -0.62
TIMP3-201ENST00000266085 PDE6GP18545 87 aa11.2□□□□□ -0.62
TIMP3-201ENST00000266085 SYCNQ0VAF6 134 aa11.19□□□□□ -0.62
TIMP3-201ENST00000266085 NDUFS5O43920 106 aa11.19□□□□□ -0.62
TIMP3-201ENST00000266085 NDUFB1O75438 58 aa11.19□□□□□ -0.62
TIMP3-201ENST00000266085 HIGD2AQ9BW72 106 aa11.18□□□□□ -0.62
TIMP3-201ENST00000266085 LINC00959A0A1B0GUT2 108 aa11.18□□□□□ -0.62
TIMP3-201ENST00000266085 BRCA2P51587 3418 aa11.18□□□□□ -0.62
TIMP3-201ENST00000266085 IGIPA6NJ69 53 aa11.18□□□□□ -0.62
TIMP3-201ENST00000266085 MAST4O15021 2626 aa11.17□□□□□ -0.62
TIMP3-201ENST00000266085 TIMM17BO60830 172 aa11.17□□□□□ -0.62
TIMP3-201ENST00000266085 C1orf158Q8N1D5 194 aa11.17□□□□□ -0.62
TIMP3-201ENST00000266085 URB1-AS1Q96HZ7 61 aa11.17□□□□□ -0.62
TIMP3-201ENST00000266085 C14orf132Q9NPU4 83 aa11.17□□□□□ -0.62
TIMP3-201ENST00000266085 CLUHP3Q96NS8 147 aa11.16□□□□□ -0.62
TIMP3-201ENST00000266085 C2orf91Q6ZV80 131 aa11.16□□□□□ -0.62
TIMP3-201ENST00000266085 UBE2D1P51668 147 aa11.16□□□□□ -0.62
TIMP3-201ENST00000266085 CDC42SE2Q9NRR3 84 aa11.16□□□□□ -0.62
TIMP3-201ENST00000266085 TRIAP1O43715 76 aa11.15□□□□□ -0.62
TIMP3-201ENST00000266085 NANOS2P60321 138 aaKnown RBP11.15□□□□□ -0.62
TIMP3-201ENST00000266085 LINC00526Q96FQ7 95 aa11.15□□□□□ -0.62
TIMP3-201ENST00000266085 ATRQ13535 2644 aa11.14□□□□□ -0.63
TIMP3-201ENST00000266085 A0A0J9YWU9 116 aa11.14□□□□□ -0.63
TIMP3-201ENST00000266085 FAM236AA0A1B0GUQ0 79 aa11.14□□□□□ -0.63
TIMP3-201ENST00000266085 FAM236BA0A1B0GV22 79 aa11.14□□□□□ -0.63
TIMP3-201ENST00000266085 TRBV30A0A0K0K1B3 111 aa11.14□□□□□ -0.63
TIMP3-201ENST00000266085 G3V4G9 280 aa11.14□□□□□ -0.63
TIMP3-201ENST00000266085 IGLV2-18A0A075B6J9 118 aa11.14□□□□□ -0.63
TIMP3-201ENST00000266085 C6orf99Q4VX62 202 aa11.14□□□□□ -0.63
TIMP3-201ENST00000266085 PCSK5Q92824 1860 aa11.14□□□□□ -0.63
TIMP3-201ENST00000266085 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.13□□□□□ -0.63
TIMP3-201ENST00000266085 B9D2Q9BPU9 175 aa11.13□□□□□ -0.63
TIMP3-201ENST00000266085 ATOX1O00244 68 aa11.13□□□□□ -0.63
TIMP3-201ENST00000266085 RETNQ9HD89 108 aa11.13□□□□□ -0.63
TIMP3-201ENST00000266085 HELZ2Q9BYK8 2649 aaKnown RBP11.13□□□□□ -0.63
TIMP3-201ENST00000266085 A0A1B0GX51 115 aa11.13□□□□□ -0.63
TIMP3-201ENST00000266085 LINC00242Q5T6M2 205 aa11.11□□□□□ -0.63
TIMP3-201ENST00000266085 TEX49A0A1B0GTD5 131 aa11.11□□□□□ -0.63
TIMP3-201ENST00000266085 C4orf48Q5BLP8 95 aa11.11□□□□□ -0.63
TIMP3-201ENST00000266085 LINC00643Q86TS7 51 aa11.11□□□□□ -0.63
TIMP3-201ENST00000266085 B5MCH6 92 aa11.1□□□□□ -0.63
TIMP3-201ENST00000266085 MUC4Q99102 2169 aa11.1□□□□□ -0.63
TIMP3-201ENST00000266085 TRANK1O15050 2925 aa11.1□□□□□ -0.63
TIMP3-201ENST00000266085 BPTFQ12830 3046 aa11.09□□□□□ -0.63
TIMP3-201ENST00000266085 A0A087WZ39 114 aa11.09□□□□□ -0.63
TIMP3-201ENST00000266085 PRUNE2Q8WUY3 3088 aa11.09□□□□□ -0.63
TIMP3-201ENST00000266085 FAM19A1Q7Z5A9 133 aa11.09□□□□□ -0.63
TIMP3-201ENST00000266085 POM121L12Q8N7R1 296 aa11.09□□□□□ -0.63
TIMP3-201ENST00000266085 SLPIP03973 132 aa11.08□□□□□ -0.63
TIMP3-201ENST00000266085 CFAP46Q8IYW2 2715 aa11.08□□□□□ -0.64
TIMP3-201ENST00000266085 FAM19A5Q7Z5A7 132 aaPredicted RBP11.08□□□□□ -0.64
TIMP3-201ENST00000266085 IGLV4-69A0A075B6H9 119 aa11.07□□□□□ -0.64
TIMP3-201ENST00000266085 Q8IZM0 81 aa11.07□□□□□ -0.64
TIMP3-201ENST00000266085 Q8N2B8 174 aa11.07□□□□□ -0.64
TIMP3-201ENST00000266085 MP68P56378 58 aa11.07□□□□□ -0.64
TIMP3-201ENST00000266085 BEAN1Q3B7T3 259 aa11.07□□□□□ -0.64
TIMP3-201ENST00000266085 M0R2N4 97 aa11.06□□□□□ -0.64
TIMP3-201ENST00000266085 A0A096LNI7 61 aa11.05□□□□□ -0.64
TIMP3-201ENST00000266085 CHCHD7Q9BUK0 85 aa11.05□□□□□ -0.64
TIMP3-201ENST00000266085 TRAV23DV6A0A075B6W5 121 aa11.05□□□□□ -0.64
TIMP3-201ENST00000266085 ZNF292O60281 2723 aa11.05□□□□□ -0.64
TIMP3-201ENST00000266085 FHL2Q14192 279 aa11.05□□□□□ -0.64
TIMP3-201ENST00000266085 FLNAP21333 2647 aaKnown RBP11.05□□□□□ -0.64
TIMP3-201ENST00000266085 A0A096LNJ9 63 aa11.04□□□□□ -0.64
TIMP3-201ENST00000266085 BPY2O14599 106 aa11.04□□□□□ -0.64
TIMP3-201ENST00000266085 Q6ZTC4 211 aa11.04□□□□□ -0.64
TIMP3-201ENST00000266085 IGKV2-28A0A075B6P5 120 aa11.04□□□□□ -0.64
TIMP3-201ENST00000266085 CYSRT1A8MQ03 144 aa11.04□□□□□ -0.64
TIMP3-201ENST00000266085 IGKV2D-28P01615 120 aa11.04□□□□□ -0.64
TIMP3-201ENST00000266085 COX17Q14061 63 aa11.04□□□□□ -0.64
TIMP3-201ENST00000266085 SMIM1B2RUZ4 78 aa11.03□□□□□ -0.64
TIMP3-201ENST00000266085 LINC00694P0DN24 101 aa11.03□□□□□ -0.64
TIMP3-201ENST00000266085 MUC7Q8TAX7 377 aa11.03□□□□□ -0.64
TIMP3-201ENST00000266085 CSDC2Q9Y534 153 aaKnown RBP11.03□□□□□ -0.64
TIMP3-201ENST00000266085 M0R378 163 aa11.02□□□□□ -0.64
TIMP3-201ENST00000266085 Q6ZQY7 126 aa11.02□□□□□ -0.64
TIMP3-201ENST00000266085 IGLV4-60A0A075B6I1 120 aa11.02□□□□□ -0.65
TIMP3-201ENST00000266085 H0Y9J4 135 aa11.02□□□□□ -0.65
TIMP3-201ENST00000266085 ITPR3Q14573 2671 aa11.02□□□□□ -0.65
TIMP3-201ENST00000266085 LST1O00453 97 aa11.02□□□□□ -0.65
TIMP3-201ENST00000266085 Q6ZSN1 163 aa11.01□□□□□ -0.65
TIMP3-201ENST00000266085 SMIM20Q8N5G0 67 aa11.01□□□□□ -0.65
TIMP3-201ENST00000266085 LAMA2P24043 3122 aaKnown RBP11.01□□□□□ -0.65
TIMP3-201ENST00000266085 SMIM11BQ8TCY0 68 aa11□□□□□ -0.65
TIMP3-201ENST00000266085 AMELXQ99217 191 aa11□□□□□ -0.65
TIMP3-201ENST00000266085 UNQ6190/PRO20217Q6UXQ8 127 aa11□□□□□ -0.65
TIMP3-201ENST00000266085 LY6G6CO95867 125 aa10.98□□□□□ -0.65
TIMP3-201ENST00000266085 MGAQ8IWI9 3026 aa10.98□□□□□ -0.65
TIMP3-201ENST00000266085 CCKP06307 115 aa10.97□□□□□ -0.65
TIMP3-201ENST00000266085 LOC107984640A0A0U1RRK4 108 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms