RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 FHL3Q13643 280 aa4.28□□□□□ -1.72
VCAN-201ENST00000265077 CEMP1Q6PRD7 247 aaPredicted RBP4.28□□□□□ -1.72
VCAN-201ENST00000265077 CLPSL1A2RUU4 121 aa4.27□□□□□ -1.73
VCAN-201ENST00000265077 TEP1Q99973 2627 aaKnown RBP4.27□□□□□ -1.73
VCAN-201ENST00000265077 CCKP06307 115 aa4.27□□□□□ -1.73
VCAN-201ENST00000265077 LINC01561Q8N1V8 128 aa4.27□□□□□ -1.73
VCAN-201ENST00000265077 UTP20O75691 2785 aaKnown RBP4.27□□□□□ -1.73
VCAN-201ENST00000265077 FBXL19-AS1Q494R0 122 aa4.27□□□□□ -1.73
VCAN-201ENST00000265077 C4orf48Q5BLP8 95 aa4.27□□□□□ -1.73
VCAN-201ENST00000265077 SPAG11BQ08648 103 aa4.27□□□□□ -1.73
VCAN-201ENST00000265077 CRIP3Q6Q6R5 217 aa4.27□□□□□ -1.73
VCAN-201ENST00000265077 CASC2Q6XLA1 102 aa4.27□□□□□ -1.73
VCAN-201ENST00000265077 LINC00308Q8TCZ7 52 aa4.27□□□□□ -1.73
VCAN-201ENST00000265077 PRR15LQ9BU68 103 aa4.27□□□□□ -1.73
VCAN-201ENST00000265077 IGHV4-38-2P0DP08 117 aa4.27□□□□□ -1.73
VCAN-201ENST00000265077 APRG1Q8IVJ8 170 aa4.26□□□□□ -1.73
VCAN-201ENST00000265077 A0A096LPF7 62 aa4.26□□□□□ -1.73
VCAN-201ENST00000265077 IBA57-AS1B1ANH7 110 aa4.26□□□□□ -1.73
VCAN-201ENST00000265077 Q8N7P7 452 aa4.26□□□□□ -1.73
VCAN-201ENST00000265077 IGHV4OR15-8A0A075B7B6 117 aa4.26□□□□□ -1.73
VCAN-201ENST00000265077 A0A087WW49 117 aa4.26□□□□□ -1.73
VCAN-201ENST00000265077 ODF3BA8MYP8 253 aa4.26□□□□□ -1.73
VCAN-201ENST00000265077 DAZAP2Q15038 168 aaPredicted RBP4.26□□□□□ -1.73
VCAN-201ENST00000265077 IGHV4-61A0A0C4DH41 118 aa4.26□□□□□ -1.73
VCAN-201ENST00000265077 ZNF80P51504 273 aaPredicted RBP4.26□□□□□ -1.73
VCAN-201ENST00000265077 SEM1Q6ZVN7 128 aa4.25□□□□□ -1.73
VCAN-201ENST00000265077 A0A096LNJ9 63 aa4.25□□□□□ -1.73
VCAN-201ENST00000265077 BRWD1-AS2P59051 145 aa4.25□□□□□ -1.73
VCAN-201ENST00000265077 Q6ZPA2 131 aa4.25□□□□□ -1.73
VCAN-201ENST00000265077 PRYO14603 147 aa4.25□□□□□ -1.73
VCAN-201ENST00000265077 IGLV2-11P01706 119 aa4.25□□□□□ -1.73
VCAN-201ENST00000265077 CRIP1P50238 77 aa4.25□□□□□ -1.73
VCAN-201ENST00000265077 ZFAND2AQ8N6M9 145 aa4.25□□□□□ -1.73
VCAN-201ENST00000265077 NRACQ8N912 160 aa4.25□□□□□ -1.73
VCAN-201ENST00000265077 CCL18P55774 89 aa4.25□□□□□ -1.73
VCAN-201ENST00000265077 CNFNQ9BYD5 112 aa4.25□□□□□ -1.73
VCAN-201ENST00000265077 IGF1P05019 195 aa4.25□□□□□ -1.73
VCAN-201ENST00000265077 Q8N6K4 173 aa4.25□□□□□ -1.73
VCAN-201ENST00000265077 TMEM254Q8TBM7 123 aa4.25□□□□□ -1.73
VCAN-201ENST00000265077 MAPK1IP1LQ8NDC0 245 aa4.25□□□□□ -1.73
VCAN-201ENST00000265077 SETXQ7Z333 2677 aaKnown RBP4.25□□□□□ -1.73
VCAN-201ENST00000265077 TRBV6-5A0A0K0K1A5 114 aa4.25□□□□□ -1.73
VCAN-201ENST00000265077 CXCL6P80162 114 aa4.25□□□□□ -1.73
VCAN-201ENST00000265077 UNQ9165/PRO28630Q6UXU0 137 aa4.25□□□□□ -1.73
VCAN-201ENST00000265077 IGHV4-30-2A0A087WSY4 118 aa4.24□□□□□ -1.73
VCAN-201ENST00000265077 IGLV10-54A0A075B6I4 117 aa4.24□□□□□ -1.73
VCAN-201ENST00000265077 IGHV4-28A0A0C4DH34 117 aa4.24□□□□□ -1.73
VCAN-201ENST00000265077 LRCOL1A6NCL2 159 aa4.24□□□□□ -1.73
VCAN-201ENST00000265077 M0QY20 66 aa4.24□□□□□ -1.73
VCAN-201ENST00000265077 C14orf177Q52M58 125 aa4.24□□□□□ -1.73
VCAN-201ENST00000265077 GRNP28799 593 aaKnown RBP4.24□□□□□ -1.73
VCAN-201ENST00000265077 CCDC140Q96MF4 163 aa4.24□□□□□ -1.73
VCAN-201ENST00000265077 DMBT1Q9UGM3 2413 aaPredicted RBP4.24□□□□□ -1.73
VCAN-201ENST00000265077 IGHV4-4A0A075B6R2 117 aa4.24□□□□□ -1.73
VCAN-201ENST00000265077 EBI3Q14213 229 aa4.24□□□□□ -1.73
VCAN-201ENST00000265077 PRO0255Q9UI72 69 aa4.24□□□□□ -1.73
VCAN-201ENST00000265077 ZFP36P26651 326 aaKnown RBP4.24□□□□□ -1.73
VCAN-201ENST00000265077 SCXQ7RTU7 201 aa4.23□□□□□ -1.73
VCAN-201ENST00000265077 LIMD2Q9BT23 127 aa4.23□□□□□ -1.73
VCAN-201ENST00000265077 ZFAND3Q9H8U3 227 aa4.23□□□□□ -1.73
VCAN-201ENST00000265077 SLPIP03973 132 aa4.23□□□□□ -1.73
VCAN-201ENST00000265077 BEAN1Q3B7T3 259 aa4.23□□□□□ -1.73
VCAN-201ENST00000265077 LINC00467Q9BRT7 94 aa4.23□□□□□ -1.73
VCAN-201ENST00000265077 PRR4Q16378 134 aa4.23□□□□□ -1.73
VCAN-201ENST00000265077 IGLV4-3A0A075B6K6 122 aa4.23□□□□□ -1.73
VCAN-201ENST00000265077 TNFRSF13BO14836 293 aaPredicted RBP4.23□□□□□ -1.73
VCAN-201ENST00000265077 BCE1O60756 84 aa4.23□□□□□ -1.73
VCAN-201ENST00000265077 POM121L12Q8N7R1 296 aa4.22□□□□□ -1.73
VCAN-201ENST00000265077 MUC7Q8TAX7 377 aa4.22□□□□□ -1.73
VCAN-201ENST00000265077 LINC00846Q9NV44 126 aa4.22□□□□□ -1.73
VCAN-201ENST00000265077 TRBV10-3A0A0K0K1G6 114 aa4.22□□□□□ -1.73
VCAN-201ENST00000265077 A0A087WZ39 114 aa4.22□□□□□ -1.73
VCAN-201ENST00000265077 A6NDX4 124 aa4.22□□□□□ -1.73
VCAN-201ENST00000265077 DEFB1P60022 68 aa4.22□□□□□ -1.73
VCAN-201ENST00000265077 DEFB113Q30KQ7 82 aa4.22□□□□□ -1.73
VCAN-201ENST00000265077 MAP6D1Q9H9H5 199 aa4.22□□□□□ -1.73
VCAN-201ENST00000265077 FAM19A1Q7Z5A9 133 aa4.22□□□□□ -1.73
VCAN-201ENST00000265077 CDKN2A-AS1Q9UH64 79 aa4.22□□□□□ -1.73
VCAN-201ENST00000265077 NANOS2P60321 138 aaKnown RBP4.21□□□□□ -1.73
VCAN-201ENST00000265077 K7EQG2 157 aa4.21□□□□□ -1.74
VCAN-201ENST00000265077 KTN1-AS1Q86SY8 53 aa4.21□□□□□ -1.74
VCAN-201ENST00000265077 GOLGB1Q14789 3259 aaKnown RBP4.21□□□□□ -1.74
VCAN-201ENST00000265077 HILS1P60008 231 aa4.21□□□□□ -1.74
VCAN-201ENST00000265077 B9D2Q9BPU9 175 aa4.21□□□□□ -1.74
VCAN-201ENST00000265077 LY6LH3BQJ8 138 aa4.21□□□□□ -1.74
VCAN-201ENST00000265077 Q8N3U1 123 aa4.21□□□□□ -1.74
VCAN-201ENST00000265077 KLK12Q9UKR0 248 aa4.21□□□□□ -1.74
VCAN-201ENST00000265077 NBEAL2Q6ZNJ1 2754 aa4.21□□□□□ -1.74
VCAN-201ENST00000265077 FHL2Q14192 279 aa4.21□□□□□ -1.74
VCAN-201ENST00000265077 COX17Q14061 63 aa4.21□□□□□ -1.74
VCAN-201ENST00000265077 TSPEAR-AS2P59090 65 aa4.21□□□□□ -1.74
VCAN-201ENST00000265077 ESM1Q9NQ30 184 aa4.21□□□□□ -1.74
VCAN-201ENST00000265077 LINC00269Q8N2A0 174 aa4.21□□□□□ -1.74
VCAN-201ENST00000265077 DCANP1Q8TF63 244 aa4.2□□□□□ -1.74
VCAN-201ENST00000265077 KLLNB2CW77 178 aa4.2□□□□□ -1.74
VCAN-201ENST00000265077 H0Y9J4 135 aa4.2□□□□□ -1.74
VCAN-201ENST00000265077 MSMPQ1L6U9 139 aa4.2□□□□□ -1.74
VCAN-201ENST00000265077 PRR15Q8IV56 129 aa4.2□□□□□ -1.74
VCAN-201ENST00000265077 ITPR1Q14643 2758 aa4.2□□□□□ -1.74
VCAN-201ENST00000265077 LINC01546A6NGU7 62 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms