RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 A8MZ25 164 aa8.45□□□□□ -1.06
PTPN4-201ENST00000263708 LINC00208Q96KT6 92 aa8.45□□□□□ -1.06
PTPN4-201ENST00000263708 SOSTDC1Q6X4U4 206 aa8.45□□□□□ -1.06
PTPN4-201ENST00000263708 IGF2RP11717 2491 aa8.45□□□□□ -1.06
PTPN4-201ENST00000263708 MRPS12O15235 138 aaKnown RBP8.45□□□□□ -1.06
PTPN4-201ENST00000263708 ZNF73O43830 326 aaPredicted RBP8.45□□□□□ -1.06
PTPN4-201ENST00000263708 PCOTHQ58A44 107 aa8.45□□□□□ -1.06
PTPN4-201ENST00000263708 TNFRSF13BO14836 293 aaPredicted RBP8.45□□□□□ -1.06
PTPN4-201ENST00000263708 LST1O00453 97 aa8.45□□□□□ -1.06
PTPN4-201ENST00000263708 REG3GQ6UW15 175 aa8.45□□□□□ -1.06
PTPN4-201ENST00000263708 PTPRBP23467 1997 aa8.44□□□□□ -1.06
PTPN4-201ENST00000263708 LRRK2Q5S007 2527 aa8.44□□□□□ -1.06
PTPN4-201ENST00000263708 PSPHP1O15172 72 aa8.44□□□□□ -1.06
PTPN4-201ENST00000263708 Q6ZSR3 168 aa8.44□□□□□ -1.06
PTPN4-201ENST00000263708 BEAN1Q3B7T3 259 aa8.44□□□□□ -1.06
PTPN4-201ENST00000263708 LELP1Q5T871 98 aa8.44□□□□□ -1.06
PTPN4-201ENST00000263708 TRBV30A0A0K0K1B3 111 aa8.43□□□□□ -1.06
PTPN4-201ENST00000263708 TRBV6-4A0A1B0GX49 114 aa8.43□□□□□ -1.06
PTPN4-201ENST00000263708 SBSPONQ8IVN8 264 aa8.43□□□□□ -1.06
PTPN4-201ENST00000263708 COX17Q14061 63 aa8.43□□□□□ -1.06
PTPN4-201ENST00000263708 RBX1P62877 108 aa8.43□□□□□ -1.06
PTPN4-201ENST00000263708 ZFYVE26Q68DK2 2539 aa8.43□□□□□ -1.06
PTPN4-201ENST00000263708 LINC00337Q8N6G1 96 aa8.43□□□□□ -1.06
PTPN4-201ENST00000263708 TLN2Q9Y4G6 2542 aa8.43□□□□□ -1.06
PTPN4-201ENST00000263708 PRLHP81277 87 aa8.43□□□□□ -1.06
PTPN4-201ENST00000263708 LINC01556Q5JQF7 62 aa8.43□□□□□ -1.06
PTPN4-201ENST00000263708 IGLV1-47P01700 117 aa8.42□□□□□ -1.06
PTPN4-201ENST00000263708 CRYGAP11844 174 aa8.42□□□□□ -1.06
PTPN4-201ENST00000263708 COL5A1P20908 1838 aaPredicted RBP8.42□□□□□ -1.06
PTPN4-201ENST00000263708 M0QY20 66 aa8.42□□□□□ -1.06
PTPN4-201ENST00000263708 K7EQG2 157 aa8.42□□□□□ -1.06
PTPN4-201ENST00000263708 IGLV2-14P01704 120 aa8.42□□□□□ -1.06
PTPN4-201ENST00000263708 C1orf137Q5JT78 98 aa8.42□□□□□ -1.06
PTPN4-201ENST00000263708 LINC01547P58512 204 aaPredicted RBP8.42□□□□□ -1.06
PTPN4-201ENST00000263708 IGFL2Q6UWQ7 119 aa8.42□□□□□ -1.06
PTPN4-201ENST00000263708 SETD2Q9BYW2 2564 aaPredicted RBP8.42□□□□□ -1.06
PTPN4-201ENST00000263708 CCDC179H3BU77 68 aa8.4□□□□□ -1.06
PTPN4-201ENST00000263708 ODF3BA8MYP8 253 aa8.4□□□□□ -1.06
PTPN4-201ENST00000263708 KRTAP27-1Q3LI81 207 aa8.4□□□□□ -1.06
PTPN4-201ENST00000263708 LRRC75A-AS1Q8N1F1 130 aa8.4□□□□□ -1.06
PTPN4-201ENST00000263708 LINC00959A0A1B0GUT2 108 aa8.4□□□□□ -1.07
PTPN4-201ENST00000263708 COL4A4P53420 1690 aaPredicted RBP8.39□□□□□ -1.07
PTPN4-201ENST00000263708 LINC00694P0DN24 101 aa8.39□□□□□ -1.07
PTPN4-201ENST00000263708 C7orf65Q6ZTY9 151 aa8.39□□□□□ -1.07
PTPN4-201ENST00000263708 PYGO1Q9Y3Y4 419 aa8.39□□□□□ -1.07
PTPN4-201ENST00000263708 MAPKAPK5-AS1Q8N8E1 139 aa8.39□□□□□ -1.07
PTPN4-201ENST00000263708 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.39□□□□□ -1.07
PTPN4-201ENST00000263708 Q6ZSV7 163 aa8.39□□□□□ -1.07
PTPN4-201ENST00000263708 CPAMD8Q8IZJ3 1885 aa8.39□□□□□ -1.07
PTPN4-201ENST00000263708 C10orf99Q6UWK7 81 aa8.38□□□□□ -1.07
PTPN4-201ENST00000263708 TP73-AS1Q9UF72 201 aa8.38□□□□□ -1.07
PTPN4-201ENST00000263708 COX7CP15954 63 aa8.38□□□□□ -1.07
PTPN4-201ENST00000263708 C19orf84I3L1E1 186 aa8.38□□□□□ -1.07
PTPN4-201ENST00000263708 C2CD3Q4AC94 2353 aa8.38□□□□□ -1.07
PTPN4-201ENST00000263708 PRM2P04554 102 aa8.37□□□□□ -1.07
PTPN4-201ENST00000263708 DEFB116Q30KQ4 102 aa8.37□□□□□ -1.07
PTPN4-201ENST00000263708 H0Y9P7 68 aa8.37□□□□□ -1.07
PTPN4-201ENST00000263708 ADAMTS20P59510 1910 aa8.37□□□□□ -1.07
PTPN4-201ENST00000263708 Q9BRP9 147 aa8.37□□□□□ -1.07
PTPN4-201ENST00000263708 IGKV2D-30A0A075B6S6 120 aa8.36□□□□□ -1.07
PTPN4-201ENST00000263708 CYSRT1A8MQ03 144 aa8.36□□□□□ -1.07
PTPN4-201ENST00000263708 IGKV2-30P06310 120 aa8.36□□□□□ -1.07
PTPN4-201ENST00000263708 C18orf65Q6ZTR6 163 aa8.36□□□□□ -1.07
PTPN4-201ENST00000263708 C6orf223Q8N319 242 aa8.36□□□□□ -1.07
PTPN4-201ENST00000263708 IMUPQ9GZP8 106 aa8.36□□□□□ -1.07
PTPN4-201ENST00000263708 SMIM26A0A096LP01 95 aa8.36□□□□□ -1.07
PTPN4-201ENST00000263708 PRORYQ9H606 182 aa8.36□□□□□ -1.07
PTPN4-201ENST00000263708 C9orf116Q5BN46 136 aaPredicted RBP8.35□□□□□ -1.07
PTPN4-201ENST00000263708 TSHBP01222 138 aa8.35□□□□□ -1.07
PTPN4-201ENST00000263708 SERTAD4-AS1Q5TG53 156 aa8.35□□□□□ -1.07
PTPN4-201ENST00000263708 MRPS36P82909 103 aaKnown RBP8.35□□□□□ -1.07
PTPN4-201ENST00000263708 C2orf48Q96LS8 159 aa8.35□□□□□ -1.07
PTPN4-201ENST00000263708 LMO4P61968 165 aa8.35□□□□□ -1.07
PTPN4-201ENST00000263708 OXLD1Q5BKU9 147 aa8.35□□□□□ -1.07
PTPN4-201ENST00000263708 MSMPQ1L6U9 139 aa8.34□□□□□ -1.07
PTPN4-201ENST00000263708 TRAV7A0A075B6U4 112 aa8.34□□□□□ -1.07
PTPN4-201ENST00000263708 CRIP2P52943 208 aaPredicted RBP8.34□□□□□ -1.07
PTPN4-201ENST00000263708 NCOR2Q9Y618 2525 aa8.33□□□□□ -1.08
PTPN4-201ENST00000263708 TRBV7-7A0A0K0K1E9 115 aa8.32□□□□□ -1.08
PTPN4-201ENST00000263708 NTM-AS1Q6ZSK4 140 aa8.32□□□□□ -1.08
PTPN4-201ENST00000263708 Q8IZM0 81 aa8.32□□□□□ -1.08
PTPN4-201ENST00000263708 MBD6Q96DN6 1003 aa8.32□□□□□ -1.08
PTPN4-201ENST00000263708 LIMD2Q9BT23 127 aa8.32□□□□□ -1.08
PTPN4-201ENST00000263708 RNF185Q96GF1 192 aa8.31□□□□□ -1.08
PTPN4-201ENST00000263708 RNASE3P12724 160 aaKnown RBP8.31□□□□□ -1.08
PTPN4-201ENST00000263708 TRBV10-3A0A0K0K1G6 114 aa8.31□□□□□ -1.08
PTPN4-201ENST00000263708 PRR3P79522 188 aaKnown RBP8.31□□□□□ -1.08
PTPN4-201ENST00000263708 Q8N814 137 aa8.31□□□□□ -1.08
PTPN4-201ENST00000263708 Q6JHZ5 121 aa8.31□□□□□ -1.08
PTPN4-201ENST00000263708 Q8NA96 180 aa8.31□□□□□ -1.08
PTPN4-201ENST00000263708 PLA2G5P39877 138 aa8.31□□□□□ -1.08
PTPN4-201ENST00000263708 HCG22E2RYF7 251 aa8.31□□□□□ -1.08
PTPN4-201ENST00000263708 C1orf134Q5TEV5 83 aa8.31□□□□□ -1.08
PTPN4-201ENST00000263708 UNQ6190/PRO20217Q6UXQ8 127 aa8.3□□□□□ -1.08
PTPN4-201ENST00000263708 hDV103S1A0JD37 113 aa8.3□□□□□ -1.08
PTPN4-201ENST00000263708 MRGPRG-AS1Q2M3A8 158 aa8.3□□□□□ -1.08
PTPN4-201ENST00000263708 SPINT4Q6UDR6 99 aa8.3□□□□□ -1.08
PTPN4-201ENST00000263708 LTBP2Q14767 1821 aa8.3□□□□□ -1.08
PTPN4-201ENST00000263708 ZNF702PQ9H963 129 aa8.3□□□□□ -1.08
PTPN4-201ENST00000263708 SPAG11AQ6PDA7 123 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms