RNA–Protein interactions for RNA: ENST00000262805.16

PDE4C-201, Transcript of phosphodiesterase 4C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4C, Length 2,472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-201ENST00000262805 GAGE7O76087 117 aa11.86□□□□□ -0.51
PDE4C-201ENST00000262805 COX6CP09669 75 aa11.86□□□□□ -0.51
PDE4C-201ENST00000262805 GAGE12FP0CL80 117 aa11.86□□□□□ -0.51
PDE4C-201ENST00000262805 GAGE12GP0CL81 117 aa11.86□□□□□ -0.51
PDE4C-201ENST00000262805 GAGE12IP0CL82 117 aa11.86□□□□□ -0.51
PDE4C-201ENST00000262805 FAM19A3Q7Z5A8 133 aa11.86□□□□□ -0.51
PDE4C-201ENST00000262805 CSDC2Q9Y534 153 aaKnown RBP11.86□□□□□ -0.51
PDE4C-201ENST00000262805 TMEM262E9PQX1 116 aa11.85□□□□□ -0.51
PDE4C-201ENST00000262805 UBE2WQ96B02 151 aa11.85□□□□□ -0.51
PDE4C-201ENST00000262805 CRLF1O75462 422 aa11.85□□□□□ -0.51
PDE4C-201ENST00000262805 CIRBPQ14011 172 aaKnown RBP11.85□□□□□ -0.51
PDE4C-201ENST00000262805 PDZD2O15018 2839 aa11.85□□□□□ -0.51
PDE4C-201ENST00000262805 PRIMA1Q86XR5 153 aa11.84□□□□□ -0.51
PDE4C-201ENST00000262805 LINC01006Q8NI28 216 aa11.84□□□□□ -0.51
PDE4C-201ENST00000262805 TRGV2A0A075B6R0 118 aa11.83□□□□□ -0.52
PDE4C-201ENST00000262805 CITED1Q99966 193 aa11.83□□□□□ -0.52
PDE4C-201ENST00000262805 C19orf73Q9NVV2 129 aa11.83□□□□□ -0.52
PDE4C-201ENST00000262805 MEIG1Q5JSS6 88 aa11.82□□□□□ -0.52
PDE4C-201ENST00000262805 FN1P02751 2386 aaKnown RBP11.82□□□□□ -0.52
PDE4C-201ENST00000262805 BAHCC1Q9P281 2608 aa11.81□□□□□ -0.52
PDE4C-201ENST00000262805 KRTAP1-1Q07627 177 aa11.81□□□□□ -0.52
PDE4C-201ENST00000262805 TMEM243Q9BU79 118 aa11.81□□□□□ -0.52
PDE4C-201ENST00000262805 ANK3Q12955 4377 aaKnown RBP11.81□□□□□ -0.52
PDE4C-201ENST00000262805 TRAV8-4A0A0B4J246 113 aa11.81□□□□□ -0.52
PDE4C-201ENST00000262805 H3BT86 120 aa11.81□□□□□ -0.52
PDE4C-201ENST00000262805 IGKV3OR2-268A0A0C4DH90 116 aa11.8□□□□□ -0.52
PDE4C-201ENST00000262805 UBE2L6O14933 153 aa11.8□□□□□ -0.52
PDE4C-201ENST00000262805 CSNK1G2-AS1Q8NCQ2 148 aa11.8□□□□□ -0.52
PDE4C-201ENST00000262805 C16orf74Q96GX8 76 aa11.8□□□□□ -0.52
PDE4C-201ENST00000262805 FLNBO75369 2602 aaKnown RBP11.79□□□□□ -0.52
PDE4C-201ENST00000262805 GAGE6Q13070 117 aa11.79□□□□□ -0.52
PDE4C-201ENST00000262805 TRAV26-1A0A087WT03 109 aa11.78□□□□□ -0.52
PDE4C-201ENST00000262805 IGLV1-51P01701 117 aa11.78□□□□□ -0.52
PDE4C-201ENST00000262805 IGLV4-60A0A075B6I1 120 aa11.78□□□□□ -0.52
PDE4C-201ENST00000262805 SHISA2Q6UWI4 295 aa11.77□□□□□ -0.53
PDE4C-201ENST00000262805 TRGV4A0A0C4DH28 118 aa11.77□□□□□ -0.53
PDE4C-201ENST00000262805 TEX29Q8N6K0 151 aa11.76□□□□□ -0.53
PDE4C-201ENST00000262805 TRBV6-4A0A1B0GX49 114 aa11.76□□□□□ -0.53
PDE4C-201ENST00000262805 COX7A2LO14548 114 aa11.76□□□□□ -0.53
PDE4C-201ENST00000262805 SNCGO76070 127 aa11.76□□□□□ -0.53
PDE4C-201ENST00000262805 FHL2Q14192 279 aa11.75□□□□□ -0.53
PDE4C-201ENST00000262805 C15orf53Q8NAA6 179 aa11.75□□□□□ -0.53
PDE4C-201ENST00000262805 TOMM7Q9P0U1 55 aa11.75□□□□□ -0.53
PDE4C-201ENST00000262805 NOTCH2Q04721 2471 aa11.75□□□□□ -0.53
PDE4C-201ENST00000262805 OVOL2Q9BRP0 275 aa11.75□□□□□ -0.53
PDE4C-201ENST00000262805 RNASE1P07998 156 aaKnown RBP11.74□□□□□ -0.53
PDE4C-201ENST00000262805 FAM218AQ96MZ4 157 aa11.74□□□□□ -0.53
PDE4C-201ENST00000262805 HERV-K104P63124 156 aa11.74□□□□□ -0.53
PDE4C-201ENST00000262805 TTC32Q5I0X7 151 aa11.74□□□□□ -0.53
PDE4C-201ENST00000262805 C16orf95Q9H693 158 aa11.74□□□□□ -0.53
PDE4C-201ENST00000262805 COX7B2Q8TF08 81 aa11.73□□□□□ -0.53
PDE4C-201ENST00000262805 GAGE2BQ13066 116 aa11.72□□□□□ -0.53
PDE4C-201ENST00000262805 GAGE2EQ4V326 116 aa11.72□□□□□ -0.53
PDE4C-201ENST00000262805 ANAPC13Q9BS18 74 aa11.72□□□□□ -0.53
PDE4C-201ENST00000262805 GAGE2DQ9UEU5 116 aa11.72□□□□□ -0.53
PDE4C-201ENST00000262805 TRBV6-8A0A0A6YYG3 113 aa11.72□□□□□ -0.53
PDE4C-201ENST00000262805 NHLRC4P0CG21 123 aaPredicted RBP11.72□□□□□ -0.53
PDE4C-201ENST00000262805 DEFB121Q5J5C9 76 aa11.72□□□□□ -0.53
PDE4C-201ENST00000262805 MIR7-3HGQ8N6C7 128 aa11.72□□□□□ -0.53
PDE4C-201ENST00000262805 NBEAL2Q6ZNJ1 2754 aa11.72□□□□□ -0.53
PDE4C-201ENST00000262805 CHCHD5Q9BSY4 110 aa11.71□□□□□ -0.53
PDE4C-201ENST00000262805 DEFB130BP0DP73 79 aa11.7□□□□□ -0.54
PDE4C-201ENST00000262805 DEFB130AP0DP74 79 aa11.7□□□□□ -0.54
PDE4C-201ENST00000262805 CMC4P56277 68 aaPredicted RBP11.7□□□□□ -0.54
PDE4C-201ENST00000262805 LINC00337Q8N6G1 96 aa11.7□□□□□ -0.54
PDE4C-201ENST00000262805 FAM110AQ9BQ89 295 aa11.7□□□□□ -0.54
PDE4C-201ENST00000262805 IGKV2-28A0A075B6P5 120 aa11.7□□□□□ -0.54
PDE4C-201ENST00000262805 IGHV3OR16-9A0A0B4J2B5 98 aa11.7□□□□□ -0.54
PDE4C-201ENST00000262805 IGKV2D-28P01615 120 aa11.7□□□□□ -0.54
PDE4C-201ENST00000262805 COPS9Q8WXC6 57 aa11.7□□□□□ -0.54
PDE4C-201ENST00000262805 C5orf38Q86SI9 138 aa11.69□□□□□ -0.54
PDE4C-201ENST00000262805 C22orf24Q9Y442 160 aa11.69□□□□□ -0.54
PDE4C-201ENST00000262805 NDUFV3P56181 108 aaKnown RBP11.67□□□□□ -0.54
PDE4C-201ENST00000262805 KRTAP10-3P60369 221 aa11.67□□□□□ -0.54
PDE4C-201ENST00000262805 OTOGQ6ZRI0 2925 aa11.67□□□□□ -0.54
PDE4C-201ENST00000262805 LINC00158P58513 81 aa11.66□□□□□ -0.54
PDE4C-201ENST00000262805 Q9HAA7 133 aa11.66□□□□□ -0.54
PDE4C-201ENST00000262805 SND1-IT1Q9HBX3 110 aa11.66□□□□□ -0.54
PDE4C-201ENST00000262805 FAM240AA0A1B0GVK7 77 aa11.66□□□□□ -0.54
PDE4C-201ENST00000262805 SVIPQ8NHG7 77 aa11.66□□□□□ -0.54
PDE4C-201ENST00000262805 VWFP04275 2813 aa11.66□□□□□ -0.54
PDE4C-201ENST00000262805 SMR3AQ99954 134 aa11.65□□□□□ -0.54
PDE4C-201ENST00000262805 C11orf68Q9H3H3 251 aaKnown RBP11.65□□□□□ -0.54
PDE4C-201ENST00000262805 TRACP01848 142 aa11.65□□□□□ -0.54
PDE4C-201ENST00000262805 CRPP02741 224 aa11.65□□□□□ -0.54
PDE4C-201ENST00000262805 BAALC-AS2P0C853 105 aa11.65□□□□□ -0.54
PDE4C-201ENST00000262805 PFN2P35080 140 aa11.65□□□□□ -0.54
PDE4C-201ENST00000262805 A0A087WZ39 114 aa11.64□□□□□ -0.55
PDE4C-201ENST00000262805 CCL18P55774 89 aa11.64□□□□□ -0.55
PDE4C-201ENST00000262805 A0A096LPF7 62 aa11.63□□□□□ -0.55
PDE4C-201ENST00000262805 LINC00959A0A1B0GUT2 108 aa11.63□□□□□ -0.55
PDE4C-201ENST00000262805 Q6Q795 121 aa11.63□□□□□ -0.55
PDE4C-201ENST00000262805 CLPSL2Q6UWE3 100 aa11.63□□□□□ -0.55
PDE4C-201ENST00000262805 SPATA3Q8NHX4 192 aa11.63□□□□□ -0.55
PDE4C-201ENST00000262805 TRAV13-2A0A0B4J235 113 aa11.63□□□□□ -0.55
PDE4C-201ENST00000262805 GYPEP15421 78 aa11.63□□□□□ -0.55
PDE4C-201ENST00000262805 RPL28P46779 137 aaKnown RBP11.63□□□□□ -0.55
PDE4C-201ENST00000262805 HILS1P60008 231 aa11.63□□□□□ -0.55
PDE4C-201ENST00000262805 PPDPFQ9H3Y8 114 aa11.63□□□□□ -0.55
PDE4C-201ENST00000262805 SMIM11BQ8TCY0 68 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms