RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 BAALC-AS2P0C853 105 aa9.3□□□□□ -0.92
SNX1-201ENST00000261889 H3BUA1 57 aa9.29□□□□□ -0.92
SNX1-201ENST00000261889 ZNF415Q09FC8 603 aa9.29□□□□□ -0.92
SNX1-201ENST00000261889 UNC79Q9P2D8 2635 aa9.29□□□□□ -0.92
SNX1-201ENST00000261889 DEFB113Q30KQ7 82 aa9.29□□□□□ -0.92
SNX1-201ENST00000261889 SDIM1Q6ZPB5 146 aa9.29□□□□□ -0.92
SNX1-201ENST00000261889 C5orf38Q86SI9 138 aa9.29□□□□□ -0.92
SNX1-201ENST00000261889 A0A087WVE0 104 aa9.28□□□□□ -0.92
SNX1-201ENST00000261889 LOC107984640A0A0U1RRK4 108 aa9.28□□□□□ -0.92
SNX1-201ENST00000261889 SMIM1B2RUZ4 78 aa9.28□□□□□ -0.92
SNX1-201ENST00000261889 C14orf132Q9NPU4 83 aa9.28□□□□□ -0.92
SNX1-201ENST00000261889 DSCR9P59020 149 aa9.28□□□□□ -0.92
SNX1-201ENST00000261889 OR13C6PQ8NH95 151 aa9.28□□□□□ -0.92
SNX1-201ENST00000261889 SPANXDQ9BXN6 97 aa9.28□□□□□ -0.92
SNX1-201ENST00000261889 SPANXCQ9NY87 97 aa9.28□□□□□ -0.92
SNX1-201ENST00000261889 PRR3P79522 188 aaKnown RBP9.27□□□□□ -0.92
SNX1-201ENST00000261889 C11orf72Q8NBR9 251 aa9.27□□□□□ -0.92
SNX1-201ENST00000261889 ZNF702PQ9H963 129 aa9.27□□□□□ -0.92
SNX1-201ENST00000261889 HECTD1Q9ULT8 2610 aa9.27□□□□□ -0.92
SNX1-201ENST00000261889 TEP1Q99973 2627 aaKnown RBP9.27□□□□□ -0.93
SNX1-201ENST00000261889 CIRBPQ14011 172 aaKnown RBP9.27□□□□□ -0.93
SNX1-201ENST00000261889 MIR7-3HGQ8N6C7 128 aa9.27□□□□□ -0.93
SNX1-201ENST00000261889 LINC00158P58513 81 aa9.27□□□□□ -0.93
SNX1-201ENST00000261889 PYGO1Q9Y3Y4 419 aa9.27□□□□□ -0.93
SNX1-201ENST00000261889 FASNP49327 2511 aaKnown RBP9.26□□□□□ -0.93
SNX1-201ENST00000261889 A0A087WYN8 130 aa9.26□□□□□ -0.93
SNX1-201ENST00000261889 PPDPFQ9H3Y8 114 aa9.26□□□□□ -0.93
SNX1-201ENST00000261889 ESM1Q9NQ30 184 aa9.26□□□□□ -0.93
SNX1-201ENST00000261889 TIRAPP58753 221 aa9.26□□□□□ -0.93
SNX1-201ENST00000261889 WFDC9Q8NEX5 89 aa9.26□□□□□ -0.93
SNX1-201ENST00000261889 SPANXA1Q9NS26 97 aa9.25□□□□□ -0.93
SNX1-201ENST00000261889 H3BT86 120 aa9.25□□□□□ -0.93
SNX1-201ENST00000261889 NDUFA1O15239 70 aa9.25□□□□□ -0.93
SNX1-201ENST00000261889 LINC00337Q8N6G1 96 aa9.25□□□□□ -0.93
SNX1-201ENST00000261889 HIVEP1P15822 2718 aa9.25□□□□□ -0.93
SNX1-201ENST00000261889 ATRQ13535 2644 aa9.24□□□□□ -0.93
SNX1-201ENST00000261889 TRGV2A0A075B6R0 118 aa9.24□□□□□ -0.93
SNX1-201ENST00000261889 TMEM89A2RUT3 159 aa9.24□□□□□ -0.93
SNX1-201ENST00000261889 ODF3L2Q3SX64 289 aa9.24□□□□□ -0.93
SNX1-201ENST00000261889 CYSTM1Q9H1C7 97 aa9.24□□□□□ -0.93
SNX1-201ENST00000261889 VPREB3Q9UKI3 123 aa9.24□□□□□ -0.93
SNX1-201ENST00000261889 NCR3O14931 201 aa9.24□□□□□ -0.93
SNX1-201ENST00000261889 STHQ8IWL8 128 aa9.24□□□□□ -0.93
SNX1-201ENST00000261889 C1orf158Q8N1D5 194 aa9.24□□□□□ -0.93
SNX1-201ENST00000261889 PKD1L1Q8TDX9 2849 aa9.23□□□□□ -0.93
SNX1-201ENST00000261889 F8P00451 2351 aa9.23□□□□□ -0.93
SNX1-201ENST00000261889 BRI3O95415 125 aa9.23□□□□□ -0.93
SNX1-201ENST00000261889 IGLV4-60A0A075B6I1 120 aa9.23□□□□□ -0.93
SNX1-201ENST00000261889 COX7A2LO14548 114 aa9.23□□□□□ -0.93
SNX1-201ENST00000261889 YAE1D1Q9NRH1 226 aa9.23□□□□□ -0.93
SNX1-201ENST00000261889 UBE2L6O14933 153 aa9.23□□□□□ -0.93
SNX1-201ENST00000261889 INSP01308 110 aa9.23□□□□□ -0.93
SNX1-201ENST00000261889 TENM1Q9UKZ4 2725 aa9.22□□□□□ -0.93
SNX1-201ENST00000261889 C9orf153Q5TBE3 101 aa9.22□□□□□ -0.93
SNX1-201ENST00000261889 EDA2RQ9HAV5 297 aa9.22□□□□□ -0.93
SNX1-201ENST00000261889 C22orf24Q9Y442 160 aa9.22□□□□□ -0.93
SNX1-201ENST00000261889 OTOGQ6ZRI0 2925 aa9.22□□□□□ -0.93
SNX1-201ENST00000261889 DEFB130BP0DP73 79 aa9.22□□□□□ -0.93
SNX1-201ENST00000261889 DEFB130AP0DP74 79 aa9.22□□□□□ -0.93
SNX1-201ENST00000261889 SVIPQ8NHG7 77 aa9.22□□□□□ -0.93
SNX1-201ENST00000261889 PAX4O43316 350 aa9.21□□□□□ -0.94
SNX1-201ENST00000261889 SND1-IT1Q9HBX3 110 aa9.21□□□□□ -0.94
SNX1-201ENST00000261889 LECT2O14960 151 aa9.2□□□□□ -0.94
SNX1-201ENST00000261889 RPL36AP83881 106 aaKnown RBP9.2□□□□□ -0.94
SNX1-201ENST00000261889 Q8N3U1 123 aa9.2□□□□□ -0.94
SNX1-201ENST00000261889 RPL36ALQ969Q0 106 aaKnown RBP9.2□□□□□ -0.94
SNX1-201ENST00000261889 XCL1P47992 114 aa9.2□□□□□ -0.94
SNX1-201ENST00000261889 LINC01356Q8N9X3 169 aa9.2□□□□□ -0.94
SNX1-201ENST00000261889 DEFB4AO15263 64 aa9.2□□□□□ -0.94
SNX1-201ENST00000261889 HERVK_113P63121 156 aa9.2□□□□□ -0.94
SNX1-201ENST00000261889 DEFB114Q30KQ6 69 aa9.2□□□□□ -0.94
SNX1-201ENST00000261889 WFDC11Q8NEX6 87 aa9.2□□□□□ -0.94
SNX1-201ENST00000261889 LINC00526Q96FQ7 95 aa9.2□□□□□ -0.94
SNX1-201ENST00000261889 IGLV10-54A0A075B6I4 117 aa9.19□□□□□ -0.94
SNX1-201ENST00000261889 IGKV2-28A0A075B6P5 120 aa9.19□□□□□ -0.94
SNX1-201ENST00000261889 IGKV2D-28P01615 120 aa9.19□□□□□ -0.94
SNX1-201ENST00000261889 CRPP02741 224 aa9.19□□□□□ -0.94
SNX1-201ENST00000261889 SMIM11BQ8TCY0 68 aa9.19□□□□□ -0.94
SNX1-201ENST00000261889 KRTAP1-1Q07627 177 aa9.19□□□□□ -0.94
SNX1-201ENST00000261889 CDC42SE2Q9NRR3 84 aa9.18□□□□□ -0.94
SNX1-201ENST00000261889 TRRAPQ9Y4A5 3859 aa9.18□□□□□ -0.94
SNX1-201ENST00000261889 hADV29S1A0JD25 119 aa9.18□□□□□ -0.94
SNX1-201ENST00000261889 A8MTW9 85 aa9.18□□□□□ -0.94
SNX1-201ENST00000261889 F5H768 121 aa9.18□□□□□ -0.94
SNX1-201ENST00000261889 K7EQD1 137 aa9.18□□□□□ -0.94
SNX1-201ENST00000261889 FSHBP01225 129 aa9.18□□□□□ -0.94
SNX1-201ENST00000261889 IGLV5-39A0A0G2JS06 123 aa9.17□□□□□ -0.94
SNX1-201ENST00000261889 DNAL4O96015 105 aa9.17□□□□□ -0.94
SNX1-201ENST00000261889 CFAP161Q6P656 301 aa9.17□□□□□ -0.94
SNX1-201ENST00000261889 TRGV4A0A0C4DH28 118 aa9.16□□□□□ -0.94
SNX1-201ENST00000261889 HIST1H4AP62805 103 aaKnown RBP9.16□□□□□ -0.94
SNX1-201ENST00000261889 C9orf116Q5BN46 136 aaPredicted RBP9.16□□□□□ -0.94
SNX1-201ENST00000261889 IGHV4-31P0DP07 118 aa9.15□□□□□ -0.94
SNX1-201ENST00000261889 CCL18P55774 89 aa9.15□□□□□ -0.94
SNX1-201ENST00000261889 HILS1P60008 231 aa9.15□□□□□ -0.94
SNX1-201ENST00000261889 MALP21145 153 aa9.15□□□□□ -0.94
SNX1-201ENST00000261889 BEAN1Q3B7T3 259 aa9.15□□□□□ -0.94
SNX1-201ENST00000261889 LINC00846Q9NV44 126 aa9.15□□□□□ -0.95
SNX1-201ENST00000261889 M0QXV9 152 aa9.14□□□□□ -0.95
SNX1-201ENST00000261889 Q6YL49 198 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms