RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 LINC00482Q8N8I6 264 aa11.67□□□□□ -0.54
UBQLN1-201ENST00000257468 CARD19Q96LW7 228 aa11.67□□□□□ -0.54
UBQLN1-201ENST00000257468 F5H768 121 aa11.66□□□□□ -0.54
UBQLN1-201ENST00000257468 DEFB130BP0DP73 79 aa11.66□□□□□ -0.54
UBQLN1-201ENST00000257468 DEFB130AP0DP74 79 aa11.66□□□□□ -0.54
UBQLN1-201ENST00000257468 IGKV3OR2-268A0A0C4DH90 116 aa11.66□□□□□ -0.54
UBQLN1-201ENST00000257468 CRLF1O75462 422 aa11.66□□□□□ -0.54
UBQLN1-201ENST00000257468 ANKRD29Q8N6D5 301 aa11.66□□□□□ -0.54
UBQLN1-201ENST00000257468 ATP6V0E2Q8NHE4 81 aa11.66□□□□□ -0.54
UBQLN1-201ENST00000257468 NBEAL2Q6ZNJ1 2754 aa11.66□□□□□ -0.54
UBQLN1-201ENST00000257468 FN1P02751 2386 aaKnown RBP11.66□□□□□ -0.54
UBQLN1-201ENST00000257468 TEN1Q86WV5 123 aa11.65□□□□□ -0.54
UBQLN1-201ENST00000257468 TIMM17BO60830 172 aa11.65□□□□□ -0.55
UBQLN1-201ENST00000257468 ICOSQ9Y6W8 199 aa11.65□□□□□ -0.55
UBQLN1-201ENST00000257468 SLC25A20O43772 301 aa11.64□□□□□ -0.55
UBQLN1-201ENST00000257468 SPATA25Q9BR10 227 aa11.64□□□□□ -0.55
UBQLN1-201ENST00000257468 NOTCH2Q04721 2471 aa11.64□□□□□ -0.55
UBQLN1-201ENST00000257468 IGLV4-60A0A075B6I1 120 aa11.63□□□□□ -0.55
UBQLN1-201ENST00000257468 TRBV30A0A0K0K1B3 111 aa11.63□□□□□ -0.55
UBQLN1-201ENST00000257468 RPL13AP40429 203 aaKnown RBP11.62□□□□□ -0.55
UBQLN1-201ENST00000257468 SMAGPQ0VAQ4 97 aa11.62□□□□□ -0.55
UBQLN1-201ENST00000257468 PRIMA1Q86XR5 153 aa11.62□□□□□ -0.55
UBQLN1-201ENST00000257468 LINC00308Q8TCZ7 52 aa11.62□□□□□ -0.55
UBQLN1-201ENST00000257468 INAFM1C9JVW0 142 aa11.62□□□□□ -0.55
UBQLN1-201ENST00000257468 SIGMAR1Q99720 223 aa11.62□□□□□ -0.55
UBQLN1-201ENST00000257468 TENM1Q9UKZ4 2725 aa11.62□□□□□ -0.55
UBQLN1-201ENST00000257468 CIRBPQ14011 172 aaKnown RBP11.61□□□□□ -0.55
UBQLN1-201ENST00000257468 ATXN8Q156A1 80 aa11.61□□□□□ -0.55
UBQLN1-201ENST00000257468 SOSTDC1Q6X4U4 206 aa11.61□□□□□ -0.55
UBQLN1-201ENST00000257468 PPDPFLQ8WWR9 84 aa11.61□□□□□ -0.55
UBQLN1-201ENST00000257468 TRBV6-8A0A0A6YYG3 113 aa11.61□□□□□ -0.55
UBQLN1-201ENST00000257468 IFITM1P13164 125 aa11.61□□□□□ -0.55
UBQLN1-201ENST00000257468 LINC01620Q4KN68 170 aa11.61□□□□□ -0.55
UBQLN1-201ENST00000257468 CHCHD5Q9BSY4 110 aa11.61□□□□□ -0.55
UBQLN1-201ENST00000257468 MEIG1Q5JSS6 88 aa11.6□□□□□ -0.55
UBQLN1-201ENST00000257468 CLEC2BQ92478 149 aa11.6□□□□□ -0.55
UBQLN1-201ENST00000257468 X6R8D5 127 aa11.59□□□□□ -0.55
UBQLN1-201ENST00000257468 CIDEAO60543 219 aa11.58□□□□□ -0.55
UBQLN1-201ENST00000257468 CDIP1Q9H305 208 aa11.58□□□□□ -0.55
UBQLN1-201ENST00000257468 RNF183Q96D59 192 aa11.58□□□□□ -0.56
UBQLN1-201ENST00000257468 A0A096LPF7 62 aa11.57□□□□□ -0.56
UBQLN1-201ENST00000257468 H7C423 109 aa11.57□□□□□ -0.56
UBQLN1-201ENST00000257468 DEFB4AO15263 64 aa11.57□□□□□ -0.56
UBQLN1-201ENST00000257468 GYPEP15421 78 aa11.57□□□□□ -0.56
UBQLN1-201ENST00000257468 TOMM7Q9P0U1 55 aa11.57□□□□□ -0.56
UBQLN1-201ENST00000257468 NSD1Q96L73 2696 aaPredicted RBP11.57□□□□□ -0.56
UBQLN1-201ENST00000257468 KIR2DL5BQ8NHK3 375 aa11.56□□□□□ -0.56
UBQLN1-201ENST00000257468 SCGB1A1P11684 91 aa11.56□□□□□ -0.56
UBQLN1-201ENST00000257468 LINC00612Q8N6U2 182 aa11.55□□□□□ -0.56
UBQLN1-201ENST00000257468 NTN5Q8WTR8 489 aaPredicted RBP11.55□□□□□ -0.56
UBQLN1-201ENST00000257468 COX7B2Q8TF08 81 aa11.54□□□□□ -0.56
UBQLN1-201ENST00000257468 COX6CP09669 75 aa11.53□□□□□ -0.56
UBQLN1-201ENST00000257468 DEFB135Q30KP9 77 aa11.53□□□□□ -0.56
UBQLN1-201ENST00000257468 TRBV10-2A0A0K0K1G8 114 aa11.53□□□□□ -0.56
UBQLN1-201ENST00000257468 FAM222AQ5U5X8 452 aa11.53□□□□□ -0.56
UBQLN1-201ENST00000257468 C5orf38Q86SI9 138 aa11.53□□□□□ -0.56
UBQLN1-201ENST00000257468 IGHV3OR16-9A0A0B4J2B5 98 aa11.52□□□□□ -0.56
UBQLN1-201ENST00000257468 TEX49A0A1B0GTD5 131 aa11.52□□□□□ -0.56
UBQLN1-201ENST00000257468 M0QXV9 152 aa11.52□□□□□ -0.56
UBQLN1-201ENST00000257468 HERV-K104P63124 156 aa11.52□□□□□ -0.56
UBQLN1-201ENST00000257468 TRRAPQ9Y4A5 3859 aa11.52□□□□□ -0.57
UBQLN1-201ENST00000257468 LST1O00453 97 aa11.51□□□□□ -0.57
UBQLN1-201ENST00000257468 C9orf66Q5T8R8 295 aa11.51□□□□□ -0.57
UBQLN1-201ENST00000257468 CLPSL2Q6UWE3 100 aa11.51□□□□□ -0.57
UBQLN1-201ENST00000257468 TMEM262E9PQX1 116 aa11.51□□□□□ -0.57
UBQLN1-201ENST00000257468 MT-ATP8P03928 68 aa11.51□□□□□ -0.57
UBQLN1-201ENST00000257468 XGP55808 180 aa11.51□□□□□ -0.57
UBQLN1-201ENST00000257468 C2orf82Q6UX34 121 aa11.5□□□□□ -0.57
UBQLN1-201ENST00000257468 LINC00959A0A1B0GUT2 108 aa11.49□□□□□ -0.57
UBQLN1-201ENST00000257468 MIR7-3HGQ8N6C7 128 aa11.49□□□□□ -0.57
UBQLN1-201ENST00000257468 C11orf68Q9H3H3 251 aaKnown RBP11.49□□□□□ -0.57
UBQLN1-201ENST00000257468 HIVEP1P15822 2718 aa11.49□□□□□ -0.57
UBQLN1-201ENST00000257468 PRO0255Q9UI72 69 aa11.48□□□□□ -0.57
UBQLN1-201ENST00000257468 XCL1P47992 114 aa11.48□□□□□ -0.57
UBQLN1-201ENST00000257468 A0A087WZ39 114 aa11.47□□□□□ -0.57
UBQLN1-201ENST00000257468 SMIM9A6NGZ8 99 aa11.47□□□□□ -0.57
UBQLN1-201ENST00000257468 ATRQ13535 2644 aa11.47□□□□□ -0.57
UBQLN1-201ENST00000257468 Q8N3U1 123 aa11.47□□□□□ -0.57
UBQLN1-201ENST00000257468 COPS9Q8WXC6 57 aa11.47□□□□□ -0.57
UBQLN1-201ENST00000257468 PAX4O43316 350 aa11.46□□□□□ -0.57
UBQLN1-201ENST00000257468 SHISA2Q6UWI4 295 aa11.46□□□□□ -0.57
UBQLN1-201ENST00000257468 UBE2WQ96B02 151 aa11.46□□□□□ -0.57
UBQLN1-201ENST00000257468 IGHV4-28A0A0C4DH34 117 aa11.46□□□□□ -0.58
UBQLN1-201ENST00000257468 LINC00158P58513 81 aa11.46□□□□□ -0.58
UBQLN1-201ENST00000257468 LINC01600Q96MT4 127 aa11.46□□□□□ -0.58
UBQLN1-201ENST00000257468 PFN2P35080 140 aa11.45□□□□□ -0.58
UBQLN1-201ENST00000257468 CELA1Q9UNI1 258 aa11.45□□□□□ -0.58
UBQLN1-201ENST00000257468 COX7A2LO14548 114 aa11.44□□□□□ -0.58
UBQLN1-201ENST00000257468 LINC00337Q8N6G1 96 aa11.44□□□□□ -0.58
UBQLN1-201ENST00000257468 TEP1Q99973 2627 aaKnown RBP11.44□□□□□ -0.58
UBQLN1-201ENST00000257468 IGKV2-28A0A075B6P5 120 aa11.43□□□□□ -0.58
UBQLN1-201ENST00000257468 LYRM9A8MSI8 78 aa11.43□□□□□ -0.58
UBQLN1-201ENST00000257468 H3BT86 120 aa11.43□□□□□ -0.58
UBQLN1-201ENST00000257468 IGKV2D-28P01615 120 aa11.43□□□□□ -0.58
UBQLN1-201ENST00000257468 CITED1Q99966 193 aa11.43□□□□□ -0.58
UBQLN1-201ENST00000257468 SND1-IT1Q9HBX3 110 aa11.43□□□□□ -0.58
UBQLN1-201ENST00000257468 A0A1B0GUV1 79 aa11.42□□□□□ -0.58
UBQLN1-201ENST00000257468 CCL18P55774 89 aa11.42□□□□□ -0.58
UBQLN1-201ENST00000257468 FAM218AQ96MZ4 157 aa11.42□□□□□ -0.58
UBQLN1-201ENST00000257468 APOC4P55056 127 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms