RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 CITED2Q99967 270 aaPredicted RBP12.73□□□□□ -0.37
NDFIP1-201ENST00000253814 DEFB4AO15263 64 aa12.72□□□□□ -0.37
NDFIP1-201ENST00000253814 HAMPP81172 84 aa12.72□□□□□ -0.37
NDFIP1-201ENST00000253814 LINC00643Q86TS7 51 aa12.72□□□□□ -0.37
NDFIP1-201ENST00000253814 RELNP78509 3460 aa12.72□□□□□ -0.37
NDFIP1-201ENST00000253814 Q6YL49 198 aa12.71□□□□□ -0.37
NDFIP1-201ENST00000253814 CMC4P56277 68 aaPredicted RBP12.71□□□□□ -0.37
NDFIP1-201ENST00000253814 C4orf3Q8WVX3 66 aa12.7□□□□□ -0.38
NDFIP1-201ENST00000253814 TRBV10-1A0A0K0K1A3 114 aa12.7□□□□□ -0.38
NDFIP1-201ENST00000253814 ORMDL1Q9P0S3 153 aa12.7□□□□□ -0.38
NDFIP1-201ENST00000253814 F5H768 121 aa12.69□□□□□ -0.38
NDFIP1-201ENST00000253814 H0YGX0 51 aa12.68□□□□□ -0.38
NDFIP1-201ENST00000253814 NCR3O14931 201 aa12.67□□□□□ -0.38
NDFIP1-201ENST00000253814 C16orf74Q96GX8 76 aa12.67□□□□□ -0.38
NDFIP1-201ENST00000253814 SMIM1B2RUZ4 78 aa12.67□□□□□ -0.38
NDFIP1-201ENST00000253814 DEFB113Q30KQ7 82 aa12.67□□□□□ -0.38
NDFIP1-201ENST00000253814 TMEM126AQ9H061 195 aa12.67□□□□□ -0.38
NDFIP1-201ENST00000253814 TRACP01848 142 aa12.66□□□□□ -0.38
NDFIP1-201ENST00000253814 UBL5Q9BZL1 73 aa12.66□□□□□ -0.38
NDFIP1-201ENST00000253814 IGHV4-31P0DP07 118 aa12.66□□□□□ -0.38
NDFIP1-201ENST00000253814 TIMM17BO60830 172 aa12.66□□□□□ -0.38
NDFIP1-201ENST00000253814 ODF3L2Q3SX64 289 aa12.65□□□□□ -0.38
NDFIP1-201ENST00000253814 FASNP49327 2511 aaKnown RBP12.65□□□□□ -0.39
NDFIP1-201ENST00000253814 PRORYQ9H606 182 aa12.64□□□□□ -0.39
NDFIP1-201ENST00000253814 Q8N2B8 174 aa12.64□□□□□ -0.39
NDFIP1-201ENST00000253814 WFDC11Q8NEX6 87 aa12.63□□□□□ -0.39
NDFIP1-201ENST00000253814 CSMD1Q96PZ7 3565 aa12.63□□□□□ -0.39
NDFIP1-201ENST00000253814 EIF4EBP3O60516 100 aaPredicted RBP12.63□□□□□ -0.39
NDFIP1-201ENST00000253814 DAD1P61803 113 aa12.63□□□□□ -0.39
NDFIP1-201ENST00000253814 CDC42SE2Q9NRR3 84 aa12.63□□□□□ -0.39
NDFIP1-201ENST00000253814 FLNCQ14315 2725 aa12.63□□□□□ -0.39
NDFIP1-201ENST00000253814 CHD6Q8TD26 2715 aa12.62□□□□□ -0.39
NDFIP1-201ENST00000253814 ITPR1Q14643 2758 aa12.62□□□□□ -0.39
NDFIP1-201ENST00000253814 PLA2G2AP14555 144 aa12.62□□□□□ -0.39
NDFIP1-201ENST00000253814 SMIM11BQ8TCY0 68 aa12.62□□□□□ -0.39
NDFIP1-201ENST00000253814 DNAJC9-AS1A6NH13 148 aa12.61□□□□□ -0.39
NDFIP1-201ENST00000253814 ATOX1O00244 68 aa12.61□□□□□ -0.39
NDFIP1-201ENST00000253814 SBSPONQ8IVN8 264 aa12.61□□□□□ -0.39
NDFIP1-201ENST00000253814 BRI3O95415 125 aa12.61□□□□□ -0.39
NDFIP1-201ENST00000253814 C1orf158Q8N1D5 194 aa12.6□□□□□ -0.39
NDFIP1-201ENST00000253814 hADV29S1A0JD25 119 aa12.6□□□□□ -0.39
NDFIP1-201ENST00000253814 CITED1Q99966 193 aa12.59□□□□□ -0.39
NDFIP1-201ENST00000253814 FLNAP21333 2647 aaKnown RBP12.59□□□□□ -0.39
NDFIP1-201ENST00000253814 KRTAP10-9P60411 292 aa12.59□□□□□ -0.39
NDFIP1-201ENST00000253814 TRAV23DV6A0A075B6W5 121 aa12.58□□□□□ -0.4
NDFIP1-201ENST00000253814 TRAV25A0A0B4J276 109 aa12.58□□□□□ -0.4
NDFIP1-201ENST00000253814 TRBV6-8A0A0A6YYG3 113 aa12.58□□□□□ -0.4
NDFIP1-201ENST00000253814 CCL18P55774 89 aa12.58□□□□□ -0.4
NDFIP1-201ENST00000253814 KLK9Q2XQG4 91 aa12.58□□□□□ -0.4
NDFIP1-201ENST00000253814 Q6Q795 121 aa12.57□□□□□ -0.4
NDFIP1-201ENST00000253814 LINC00269Q8N2A0 174 aa12.57□□□□□ -0.4
NDFIP1-201ENST00000253814 LINC00526Q96FQ7 95 aa12.57□□□□□ -0.4
NDFIP1-201ENST00000253814 IGLV4-60A0A075B6I1 120 aa12.57□□□□□ -0.4
NDFIP1-201ENST00000253814 UQCRQO14949 82 aa12.56□□□□□ -0.4
NDFIP1-201ENST00000253814 DEFB135Q30KP9 77 aa12.56□□□□□ -0.4
NDFIP1-201ENST00000253814 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.56□□□□□ -0.4
NDFIP1-201ENST00000253814 A0A087WVE0 104 aa12.55□□□□□ -0.4
NDFIP1-201ENST00000253814 SOSTDC1Q6X4U4 206 aa12.55□□□□□ -0.4
NDFIP1-201ENST00000253814 C3orf22Q8N5N4 141 aa12.55□□□□□ -0.4
NDFIP1-201ENST00000253814 LITAFQ99732 161 aa12.55□□□□□ -0.4
NDFIP1-201ENST00000253814 PRR3P79522 188 aaKnown RBP12.55□□□□□ -0.4
NDFIP1-201ENST00000253814 A0A087WYN8 130 aa12.55□□□□□ -0.4
NDFIP1-201ENST00000253814 FAM240AA0A1B0GVK7 77 aa12.55□□□□□ -0.4
NDFIP1-201ENST00000253814 DSCR8Q96T75 97 aa12.55□□□□□ -0.4
NDFIP1-201ENST00000253814 KLK5Q9Y337 293 aaPredicted RBP12.54□□□□□ -0.4
NDFIP1-201ENST00000253814 C11orf72Q8NBR9 251 aa12.54□□□□□ -0.4
NDFIP1-201ENST00000253814 WFDC9Q8NEX5 89 aa12.53□□□□□ -0.4
NDFIP1-201ENST00000253814 IBA57-AS1B1ANH7 110 aa12.53□□□□□ -0.4
NDFIP1-201ENST00000253814 NTM-AS1Q6ZSK4 140 aa12.53□□□□□ -0.4
NDFIP1-201ENST00000253814 ZNF561-AS1K7EIQ3 104 aa12.52□□□□□ -0.4
NDFIP1-201ENST00000253814 LINC00337Q8N6G1 96 aa12.52□□□□□ -0.41
NDFIP1-201ENST00000253814 RPL18AQ02543 176 aaKnown RBP12.51□□□□□ -0.41
NDFIP1-201ENST00000253814 KLK12Q9UKR0 248 aa12.51□□□□□ -0.41
NDFIP1-201ENST00000253814 F8P00451 2351 aa12.51□□□□□ -0.41
NDFIP1-201ENST00000253814 TRBV6-4A0A1B0GX49 114 aa12.51□□□□□ -0.41
NDFIP1-201ENST00000253814 BEAN1Q3B7T3 259 aa12.51□□□□□ -0.41
NDFIP1-201ENST00000253814 ZANQ9Y493 2812 aa12.5□□□□□ -0.41
NDFIP1-201ENST00000253814 GHRHP01286 108 aa12.5□□□□□ -0.41
NDFIP1-201ENST00000253814 C6orf99Q4VX62 202 aa12.5□□□□□ -0.41
NDFIP1-201ENST00000253814 FAM218AQ96MZ4 157 aa12.5□□□□□ -0.41
NDFIP1-201ENST00000253814 M0QXV9 152 aa12.5□□□□□ -0.41
NDFIP1-201ENST00000253814 PRO0255Q9UI72 69 aa12.5□□□□□ -0.41
NDFIP1-201ENST00000253814 DCHS2Q6V1P9 2916 aa12.5□□□□□ -0.41
NDFIP1-201ENST00000253814 IMUPQ9GZP8 106 aa12.49□□□□□ -0.41
NDFIP1-201ENST00000253814 CXCL5P42830 114 aa12.49□□□□□ -0.41
NDFIP1-201ENST00000253814 SPAG11BQ08648 103 aa12.49□□□□□ -0.41
NDFIP1-201ENST00000253814 FAM222AQ5U5X8 452 aa12.49□□□□□ -0.41
NDFIP1-201ENST00000253814 LINC00482Q8N8I6 264 aa12.49□□□□□ -0.41
NDFIP1-201ENST00000253814 BBC3Q96PG8 261 aaPredicted RBP12.49□□□□□ -0.41
NDFIP1-201ENST00000253814 ITPR3Q14573 2671 aa12.49□□□□□ -0.41
NDFIP1-201ENST00000253814 GCN1Q92616 2671 aaKnown RBP12.49□□□□□ -0.41
NDFIP1-201ENST00000253814 LINC00959A0A1B0GUT2 108 aa12.49□□□□□ -0.41
NDFIP1-201ENST00000253814 HRNRQ86YZ3 2850 aaPredicted RBP12.49□□□□□ -0.41
NDFIP1-201ENST00000253814 J3KT08 172 aa12.48□□□□□ -0.41
NDFIP1-201ENST00000253814 ENHOQ6UWT2 76 aa12.48□□□□□ -0.41
NDFIP1-201ENST00000253814 CFAP46Q8IYW2 2715 aa12.48□□□□□ -0.41
NDFIP1-201ENST00000253814 JMJD7-PLA2G4BH0Y9G9 81 aa12.48□□□□□ -0.41
NDFIP1-201ENST00000253814 TEX15Q9BXT5 2789 aa12.48□□□□□ -0.41
NDFIP1-201ENST00000253814 NBEAL2Q6ZNJ1 2754 aa12.48□□□□□ -0.41
NDFIP1-201ENST00000253814 C20orf197Q8N268 126 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms