RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 CDC42SE2Q9NRR3 84 aa12.45□□□□□ -0.42
KLHDC3-201ENST00000244670 TMEM101Q96IK0 257 aa12.45□□□□□ -0.42
KLHDC3-201ENST00000244670 TRAV8-3A0A0A6YYJ7 113 aa12.44□□□□□ -0.42
KLHDC3-201ENST00000244670 A0A1B0GWB2 263 aa12.44□□□□□ -0.42
KLHDC3-201ENST00000244670 IGLL5B9A064 214 aa12.44□□□□□ -0.42
KLHDC3-201ENST00000244670 H7C423 109 aa12.43□□□□□ -0.42
KLHDC3-201ENST00000244670 SMAGPQ0VAQ4 97 aa12.43□□□□□ -0.42
KLHDC3-201ENST00000244670 C11orf45Q8TAV5 145 aa12.43□□□□□ -0.42
KLHDC3-201ENST00000244670 SPANXB1Q9NS25 103 aaPredicted RBP12.43□□□□□ -0.42
KLHDC3-201ENST00000244670 ICOSQ9Y6W8 199 aa12.43□□□□□ -0.42
KLHDC3-201ENST00000244670 IGHV3-30-3P0DP02 117 aa12.43□□□□□ -0.42
KLHDC3-201ENST00000244670 COX6A2Q02221 97 aa12.43□□□□□ -0.42
KLHDC3-201ENST00000244670 MRPL23Q16540 153 aaKnown RBP12.43□□□□□ -0.42
KLHDC3-201ENST00000244670 GEMIN7Q9H840 131 aaKnown RBP12.43□□□□□ -0.42
KLHDC3-201ENST00000244670 DNHD1Q96M86 4753 aa12.42□□□□□ -0.42
KLHDC3-201ENST00000244670 IGLV4-60A0A075B6I1 120 aa12.42□□□□□ -0.42
KLHDC3-201ENST00000244670 IGLV5-45A0A087WSX0 123 aa12.42□□□□□ -0.42
KLHDC3-201ENST00000244670 TRAV13-1A0A0B4J241 112 aa12.42□□□□□ -0.42
KLHDC3-201ENST00000244670 SPINK8P0C7L1 97 aa12.42□□□□□ -0.42
KLHDC3-201ENST00000244670 TIRAPP58753 221 aa12.42□□□□□ -0.42
KLHDC3-201ENST00000244670 LINC00242Q5T6M2 205 aa12.42□□□□□ -0.42
KLHDC3-201ENST00000244670 CDKN2A-AS1Q9UH64 79 aa12.42□□□□□ -0.42
KLHDC3-201ENST00000244670 FAM19A3Q7Z5A8 133 aa12.41□□□□□ -0.42
KLHDC3-201ENST00000244670 IGHV1-58A0A0C4DH39 117 aa12.41□□□□□ -0.42
KLHDC3-201ENST00000244670 TMEM262E9PQX1 116 aa12.41□□□□□ -0.42
KLHDC3-201ENST00000244670 IGKV3OR2-268A0A0C4DH90 116 aa12.4□□□□□ -0.42
KLHDC3-201ENST00000244670 IGHV3-30P01768 117 aa12.39□□□□□ -0.43
KLHDC3-201ENST00000244670 IGHV3-30-5P0DP03 117 aa12.39□□□□□ -0.43
KLHDC3-201ENST00000244670 DNAH9Q9NYC9 4486 aa12.39□□□□□ -0.43
KLHDC3-201ENST00000244670 HERVK_113P63121 156 aa12.38□□□□□ -0.43
KLHDC3-201ENST00000244670 C10orf126Q8N4M7 172 aa12.38□□□□□ -0.43
KLHDC3-201ENST00000244670 DEFB131BA0A096LNP1 70 aa12.37□□□□□ -0.43
KLHDC3-201ENST00000244670 PGPEP1Q9NXJ5 209 aa12.37□□□□□ -0.43
KLHDC3-201ENST00000244670 APOMO95445 188 aa12.36□□□□□ -0.43
KLHDC3-201ENST00000244670 RBX1P62877 108 aa12.36□□□□□ -0.43
KLHDC3-201ENST00000244670 Q8N3U1 123 aa12.36□□□□□ -0.43
KLHDC3-201ENST00000244670 COL7A1Q02388 2944 aa12.35□□□□□ -0.43
KLHDC3-201ENST00000244670 TMEM238C9JI98 176 aa12.35□□□□□ -0.43
KLHDC3-201ENST00000244670 SH2D6Q7Z4S9 175 aa12.35□□□□□ -0.43
KLHDC3-201ENST00000244670 A0A0J9YXY3 114 aa12.34□□□□□ -0.43
KLHDC3-201ENST00000244670 OCIAD2Q56VL3 154 aa12.34□□□□□ -0.43
KLHDC3-201ENST00000244670 LELP1Q5T871 98 aa12.33□□□□□ -0.44
KLHDC3-201ENST00000244670 CLPSL2Q6UWE3 100 aa12.33□□□□□ -0.44
KLHDC3-201ENST00000244670 NDUFA12Q9UI09 145 aa12.33□□□□□ -0.44
KLHDC3-201ENST00000244670 IGLV5-39A0A0G2JS06 123 aa12.33□□□□□ -0.44
KLHDC3-201ENST00000244670 A0A1B0GUV1 79 aa12.33□□□□□ -0.44
KLHDC3-201ENST00000244670 SMIM1B2RUZ4 78 aa12.33□□□□□ -0.44
KLHDC3-201ENST00000244670 H3BNG1 76 aa12.33□□□□□ -0.44
KLHDC3-201ENST00000244670 ZFAND6Q6FIF0 208 aa12.33□□□□□ -0.44
KLHDC3-201ENST00000244670 LYPD5Q6UWN5 251 aa12.33□□□□□ -0.44
KLHDC3-201ENST00000244670 STAB2Q8WWQ8 2551 aa12.32□□□□□ -0.44
KLHDC3-201ENST00000244670 CFC1BP0CG36 223 aa12.31□□□□□ -0.44
KLHDC3-201ENST00000244670 CFC1P0CG37 223 aa12.31□□□□□ -0.44
KLHDC3-201ENST00000244670 TSPAN13O95857 204 aa12.31□□□□□ -0.44
KLHDC3-201ENST00000244670 RPL24P83731 157 aaKnown RBP12.31□□□□□ -0.44
KLHDC3-201ENST00000244670 LITAFQ99732 161 aa12.3□□□□□ -0.44
KLHDC3-201ENST00000244670 A4D1N5 150 aa12.29□□□□□ -0.44
KLHDC3-201ENST00000244670 MUSTN1Q8IVN3 82 aa12.29□□□□□ -0.44
KLHDC3-201ENST00000244670 B9D2Q9BPU9 175 aa12.29□□□□□ -0.44
KLHDC3-201ENST00000244670 TRAV10A0A0B4J240 114 aa12.29□□□□□ -0.44
KLHDC3-201ENST00000244670 H3BMG7 143 aa12.29□□□□□ -0.44
KLHDC3-201ENST00000244670 LINC00959A0A1B0GUT2 108 aa12.28□□□□□ -0.44
KLHDC3-201ENST00000244670 K7ERU9 68 aa12.28□□□□□ -0.44
KLHDC3-201ENST00000244670 ANGP03950 147 aaKnown RBP12.28□□□□□ -0.44
KLHDC3-201ENST00000244670 LINC00269Q8N2A0 174 aa12.28□□□□□ -0.44
KLHDC3-201ENST00000244670 LOC107984156A0A0G2JMH3 177 aa12.27□□□□□ -0.44
KLHDC3-201ENST00000244670 NDUFA1O15239 70 aa12.27□□□□□ -0.44
KLHDC3-201ENST00000244670 ARL17AQ8IVW1 177 aa12.27□□□□□ -0.44
KLHDC3-201ENST00000244670 PRO1854Q9UHT4 67 aa12.27□□□□□ -0.44
KLHDC3-201ENST00000244670 RNF151Q2KHN1 245 aa12.27□□□□□ -0.45
KLHDC3-201ENST00000244670 F8W1H4 67 aa12.26□□□□□ -0.45
KLHDC3-201ENST00000244670 ESRGQ1W209 222 aa12.26□□□□□ -0.45
KLHDC3-201ENST00000244670 ADAMTSL4-AS1Q5T5F5 129 aa12.26□□□□□ -0.45
KLHDC3-201ENST00000244670 SFTA2Q6UW10 78 aa12.26□□□□□ -0.45
KLHDC3-201ENST00000244670 PRSS2P07478 247 aa12.25□□□□□ -0.45
KLHDC3-201ENST00000244670 LYRM7Q5U5X0 104 aa12.25□□□□□ -0.45
KLHDC3-201ENST00000244670 WFDC10BQ8IUB3 73 aa12.25□□□□□ -0.45
KLHDC3-201ENST00000244670 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.25□□□□□ -0.45
KLHDC3-201ENST00000244670 IGHV3OR16-9A0A0B4J2B5 98 aa12.25□□□□□ -0.45
KLHDC3-201ENST00000244670 SPANXDQ9BXN6 97 aa12.25□□□□□ -0.45
KLHDC3-201ENST00000244670 SPANXCQ9NY87 97 aa12.25□□□□□ -0.45
KLHDC3-201ENST00000244670 CBY1Q9Y3M2 126 aa12.25□□□□□ -0.45
KLHDC3-201ENST00000244670 PRKDCP78527 4128 aaKnown RBP12.24□□□□□ -0.45
KLHDC3-201ENST00000244670 A0A0B4J2C4 111 aa12.24□□□□□ -0.45
KLHDC3-201ENST00000244670 IGHV3-33P01772 117 aa12.24□□□□□ -0.45
KLHDC3-201ENST00000244670 XCL1P47992 114 aa12.24□□□□□ -0.45
KLHDC3-201ENST00000244670 Q9H8V8 135 aa12.24□□□□□ -0.45
KLHDC3-201ENST00000244670 MEGF8Q7Z7M0 2845 aa12.24□□□□□ -0.45
KLHDC3-201ENST00000244670 REG3AQ06141 175 aa12.23□□□□□ -0.45
KLHDC3-201ENST00000244670 SS18Q15532 418 aa12.23□□□□□ -0.45
KLHDC3-201ENST00000244670 IGLV10-54A0A075B6I4 117 aa12.23□□□□□ -0.45
KLHDC3-201ENST00000244670 MIAQ16674 131 aa12.23□□□□□ -0.45
KLHDC3-201ENST00000244670 C5orf38Q86SI9 138 aa12.23□□□□□ -0.45
KLHDC3-201ENST00000244670 ZNF625Q96I27 306 aaPredicted RBP12.22□□□□□ -0.45
KLHDC3-201ENST00000244670 KLK12Q9UKR0 248 aa12.22□□□□□ -0.45
KLHDC3-201ENST00000244670 EIF4EBP3O60516 100 aaPredicted RBP12.21□□□□□ -0.45
KLHDC3-201ENST00000244670 TIMM17BO60830 172 aa12.21□□□□□ -0.45
KLHDC3-201ENST00000244670 PSMB2P49721 201 aa12.21□□□□□ -0.45
KLHDC3-201ENST00000244670 WFDC2Q14508 124 aa12.21□□□□□ -0.46
KLHDC3-201ENST00000244670 A0A087WZ39 114 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms