RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 IGHV1-58A0A0C4DH39 117 aa9.11□□□□□ -0.95
SLIRP-201ENST00000238688 J3QQQ9 107 aa9.11□□□□□ -0.95
SLIRP-201ENST00000238688 LGALS3P17931 250 aaKnown RBP9.11□□□□□ -0.95
SLIRP-201ENST00000238688 COL5A1-AS1Q5SY13 56 aa9.11□□□□□ -0.95
SLIRP-201ENST00000238688 LINC00469Q8N7U9 141 aa9.11□□□□□ -0.95
SLIRP-201ENST00000238688 A0A0J9YY99 117 aa9.1□□□□□ -0.95
SLIRP-201ENST00000238688 HTN3P15516 51 aa9.1□□□□□ -0.95
SLIRP-201ENST00000238688 GAGE6Q13070 117 aa9.1□□□□□ -0.95
SLIRP-201ENST00000238688 LINC00242Q5T6M2 205 aa9.1□□□□□ -0.95
SLIRP-201ENST00000238688 LINC00476Q8WZB0 136 aa9.1□□□□□ -0.95
SLIRP-201ENST00000238688 DEFB131BA0A096LNP1 70 aa9.09□□□□□ -0.95
SLIRP-201ENST00000238688 ZNF815PA8K554 130 aa9.09□□□□□ -0.95
SLIRP-201ENST00000238688 Q6ZTC4 211 aa9.09□□□□□ -0.95
SLIRP-201ENST00000238688 IGLV5-39A0A0G2JS06 123 aa9.08□□□□□ -0.96
SLIRP-201ENST00000238688 A6NDN8 102 aa9.08□□□□□ -0.96
SLIRP-201ENST00000238688 RBX1P62877 108 aa9.08□□□□□ -0.96
SLIRP-201ENST00000238688 SS18Q15532 418 aa9.08□□□□□ -0.96
SLIRP-201ENST00000238688 SPANXB1Q9NS25 103 aaPredicted RBP9.08□□□□□ -0.96
SLIRP-201ENST00000238688 FRAS1Q86XX4 4008 aa9.07□□□□□ -0.96
SLIRP-201ENST00000238688 VPS13DQ5THJ4 4388 aa9.07□□□□□ -0.96
SLIRP-201ENST00000238688 NUPR2A6NF83 97 aa9.07□□□□□ -0.96
SLIRP-201ENST00000238688 TMEM262E9PQX1 116 aa9.07□□□□□ -0.96
SLIRP-201ENST00000238688 IGHV3-30-3P0DP02 117 aa9.07□□□□□ -0.96
SLIRP-201ENST00000238688 GCSHP23434 173 aa9.07□□□□□ -0.96
SLIRP-201ENST00000238688 SCGB1D4Q6XE38 83 aa9.07□□□□□ -0.96
SLIRP-201ENST00000238688 Q6ZVH6 145 aa9.07□□□□□ -0.96
SLIRP-201ENST00000238688 TRAV13-1A0A0B4J241 112 aa9.06□□□□□ -0.96
SLIRP-201ENST00000238688 MPV17L2Q567V2 206 aa9.06□□□□□ -0.96
SLIRP-201ENST00000238688 RNASE13Q5GAN3 156 aaKnown RBP9.06□□□□□ -0.96
SLIRP-201ENST00000238688 BVES-AS1Q5T3Y7 98 aa9.06□□□□□ -0.96
SLIRP-201ENST00000238688 LYPD5Q6UWN5 251 aa9.06□□□□□ -0.96
SLIRP-201ENST00000238688 TM2D2Q9BX73 214 aa9.06□□□□□ -0.96
SLIRP-201ENST00000238688 CDKN2A-AS1Q9UH64 79 aa9.06□□□□□ -0.96
SLIRP-201ENST00000238688 DNAH6Q9C0G6 4158 aa9.06□□□□□ -0.96
SLIRP-201ENST00000238688 DNAH10Q8IVF4 4471 aa9.06□□□□□ -0.96
SLIRP-201ENST00000238688 IGLV4-60A0A075B6I1 120 aa9.05□□□□□ -0.96
SLIRP-201ENST00000238688 TMEM238LA0A1B0GVL6 79 aa9.05□□□□□ -0.96
SLIRP-201ENST00000238688 A6NJY4 79 aa9.05□□□□□ -0.96
SLIRP-201ENST00000238688 TMEM238C9JI98 176 aa9.05□□□□□ -0.96
SLIRP-201ENST00000238688 EREGO14944 169 aa9.05□□□□□ -0.96
SLIRP-201ENST00000238688 TIMM17BO60830 172 aa9.05□□□□□ -0.96
SLIRP-201ENST00000238688 NANOS2P60321 138 aaKnown RBP9.05□□□□□ -0.96
SLIRP-201ENST00000238688 ORAOV1Q8WV07 137 aa9.05□□□□□ -0.96
SLIRP-201ENST00000238688 COPS9Q8WXC6 57 aa9.05□□□□□ -0.96
SLIRP-201ENST00000238688 TP73-AS1Q9UF72 201 aa9.05□□□□□ -0.96
SLIRP-201ENST00000238688 A0A087WZ39 114 aa9.04□□□□□ -0.96
SLIRP-201ENST00000238688 IGHV3OR16-9A0A0B4J2B5 98 aa9.04□□□□□ -0.96
SLIRP-201ENST00000238688 LINC00959A0A1B0GUT2 108 aa9.04□□□□□ -0.96
SLIRP-201ENST00000238688 HINT1P49773 126 aaPredicted RBP9.04□□□□□ -0.96
SLIRP-201ENST00000238688 HERV-K104P63124 156 aa9.04□□□□□ -0.96
SLIRP-201ENST00000238688 MAPKAPK5-AS1Q8N8E1 139 aa9.04□□□□□ -0.96
SLIRP-201ENST00000238688 TRAV8-4A0A0B4J246 113 aa9.03□□□□□ -0.96
SLIRP-201ENST00000238688 A0A0J9YXY3 114 aa9.03□□□□□ -0.96
SLIRP-201ENST00000238688 SMIM1B2RUZ4 78 aa9.03□□□□□ -0.96
SLIRP-201ENST00000238688 NDUFA1O15239 70 aa9.03□□□□□ -0.96
SLIRP-201ENST00000238688 LY6G6CO95867 125 aa9.03□□□□□ -0.96
SLIRP-201ENST00000238688 PPDPFQ9H3Y8 114 aa9.03□□□□□ -0.96
SLIRP-201ENST00000238688 PRR34Q9NV39 138 aa9.03□□□□□ -0.96
SLIRP-201ENST00000238688 NDUFA12Q9UI09 145 aa9.03□□□□□ -0.96
SLIRP-201ENST00000238688 K7EP13 123 aa9.02□□□□□ -0.97
SLIRP-201ENST00000238688 TCTAP57738 103 aa9.02□□□□□ -0.97
SLIRP-201ENST00000238688 CD164L2Q6UWJ8 174 aa9.02□□□□□ -0.97
SLIRP-201ENST00000238688 CEND1Q8N111 149 aa9.02□□□□□ -0.97
SLIRP-201ENST00000238688 HIST1H4GQ99525 98 aa9.02□□□□□ -0.97
SLIRP-201ENST00000238688 ANGP03950 147 aaKnown RBP9.01□□□□□ -0.97
SLIRP-201ENST00000238688 TSPEAR-AS2P59090 65 aa9.01□□□□□ -0.97
SLIRP-201ENST00000238688 COX6A2Q02221 97 aa9.01□□□□□ -0.97
SLIRP-201ENST00000238688 REG3AQ06141 175 aa9.01□□□□□ -0.97
SLIRP-201ENST00000238688 CIRBPQ14011 172 aaKnown RBP9.01□□□□□ -0.97
SLIRP-201ENST00000238688 BATFQ16520 125 aa9.01□□□□□ -0.97
SLIRP-201ENST00000238688 TTTY13Q9BZ97 58 aa9.01□□□□□ -0.97
SLIRP-201ENST00000238688 KLK5Q9Y337 293 aaPredicted RBP9.01□□□□□ -0.97
SLIRP-201ENST00000238688 SPINK8P0C7L1 97 aa9□□□□□ -0.97
SLIRP-201ENST00000238688 LINC01556Q5JQF7 62 aa9□□□□□ -0.97
SLIRP-201ENST00000238688 TRAV8-3A0A0A6YYJ7 113 aa8.99□□□□□ -0.97
SLIRP-201ENST00000238688 IFITM1P13164 125 aa8.99□□□□□ -0.97
SLIRP-201ENST00000238688 CXCL5P42830 114 aa8.99□□□□□ -0.97
SLIRP-201ENST00000238688 SRSF9Q13242 221 aaKnown RBP eCLIP8.99□□□□□ -0.97
SLIRP-201ENST00000238688 MIAQ16674 131 aa8.99□□□□□ -0.97
SLIRP-201ENST00000238688 SPANXDQ9BXN6 97 aa8.99□□□□□ -0.97
SLIRP-201ENST00000238688 SPANXCQ9NY87 97 aa8.99□□□□□ -0.97
SLIRP-201ENST00000238688 CRPP02741 224 aa8.98□□□□□ -0.97
SLIRP-201ENST00000238688 PTTG1IPP53801 180 aa8.98□□□□□ -0.97
SLIRP-201ENST00000238688 LINC00269Q8N2A0 174 aa8.98□□□□□ -0.97
SLIRP-201ENST00000238688 A0A1B0GWB2 263 aa8.97□□□□□ -0.97
SLIRP-201ENST00000238688 APOMO95445 188 aa8.97□□□□□ -0.97
SLIRP-201ENST00000238688 CCL18P55774 89 aa8.97□□□□□ -0.97
SLIRP-201ENST00000238688 RPL24P83731 157 aaKnown RBP8.97□□□□□ -0.97
SLIRP-201ENST00000238688 Q8IZM0 81 aa8.97□□□□□ -0.97
SLIRP-201ENST00000238688 C10orf126Q8N4M7 172 aa8.97□□□□□ -0.97
SLIRP-201ENST00000238688 COX7B2Q8TF08 81 aa8.97□□□□□ -0.97
SLIRP-201ENST00000238688 UPK3BQ9BT76 320 aa8.97□□□□□ -0.97
SLIRP-201ENST00000238688 APLNQ9ULZ1 77 aa8.97□□□□□ -0.97
SLIRP-201ENST00000238688 COX7A2LO14548 114 aa8.96□□□□□ -0.98
SLIRP-201ENST00000238688 DNAH10OSP0CZ25 163 aa8.96□□□□□ -0.98
SLIRP-201ENST00000238688 ESRGQ1W209 222 aa8.96□□□□□ -0.98
SLIRP-201ENST00000238688 ZNF625Q96I27 306 aaPredicted RBP8.96□□□□□ -0.98
SLIRP-201ENST00000238688 IGHV3-64A0A075B6Q5 118 aa8.95□□□□□ -0.98
SLIRP-201ENST00000238688 SMIM13P0DJ93 91 aa8.95□□□□□ -0.98
SLIRP-201ENST00000238688 CHCHD10Q8WYQ3 142 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms