RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 WFDC11Q8NEX6 87 aa11.58□□□□□ -0.55
LTBR-201ENST00000228918 UBE2WQ96B02 151 aa11.58□□□□□ -0.55
LTBR-201ENST00000228918 CITED2Q99967 270 aaPredicted RBP11.58□□□□□ -0.55
LTBR-201ENST00000228918 GIG44P09565 113 aaPredicted RBP11.58□□□□□ -0.56
LTBR-201ENST00000228918 NOP10Q9NPE3 64 aaKnown RBP11.58□□□□□ -0.56
LTBR-201ENST00000228918 NBPF19A0A087WUL8 3843 aa11.58□□□□□ -0.56
LTBR-201ENST00000228918 NF1P21359 2839 aa11.57□□□□□ -0.56
LTBR-201ENST00000228918 F5H768 121 aa11.57□□□□□ -0.56
LTBR-201ENST00000228918 MRPL23Q16540 153 aaKnown RBP11.57□□□□□ -0.56
LTBR-201ENST00000228918 ZNF625Q96I27 306 aaPredicted RBP11.57□□□□□ -0.56
LTBR-201ENST00000228918 PLAC8L1A1L4L8 177 aa11.56□□□□□ -0.56
LTBR-201ENST00000228918 SOSTDC1Q6X4U4 206 aa11.55□□□□□ -0.56
LTBR-201ENST00000228918 C16orf74Q96GX8 76 aa11.55□□□□□ -0.56
LTBR-201ENST00000228918 A0A0U1RRA0 63 aa11.55□□□□□ -0.56
LTBR-201ENST00000228918 PRIMA1Q86XR5 153 aa11.55□□□□□ -0.56
LTBR-201ENST00000228918 WFDC10AQ9H1F0 79 aa11.55□□□□□ -0.56
LTBR-201ENST00000228918 SETXQ7Z333 2677 aaKnown RBP11.54□□□□□ -0.56
LTBR-201ENST00000228918 CUBNO60494 3623 aa11.54□□□□□ -0.56
LTBR-201ENST00000228918 NOTCH3Q9UM47 2321 aa11.54□□□□□ -0.56
LTBR-201ENST00000228918 CMC4P56277 68 aaPredicted RBP11.54□□□□□ -0.56
LTBR-201ENST00000228918 COPS9Q8WXC6 57 aa11.54□□□□□ -0.56
LTBR-201ENST00000228918 TMEM243Q9BU79 118 aa11.54□□□□□ -0.56
LTBR-201ENST00000228918 FLNAP21333 2647 aaKnown RBP11.54□□□□□ -0.56
LTBR-201ENST00000228918 UBE2L6O14933 153 aa11.53□□□□□ -0.56
LTBR-201ENST00000228918 JMJD1CQ15652 2540 aa11.53□□□□□ -0.56
LTBR-201ENST00000228918 FAM240AA0A1B0GVK7 77 aa11.53□□□□□ -0.56
LTBR-201ENST00000228918 MEIG1Q5JSS6 88 aa11.53□□□□□ -0.56
LTBR-201ENST00000228918 DEFB121Q5J5C9 76 aa11.52□□□□□ -0.56
LTBR-201ENST00000228918 LOC100131303A0A0U1RQF7 123 aa11.52□□□□□ -0.57
LTBR-201ENST00000228918 LINC01006Q8NI28 216 aa11.52□□□□□ -0.57
LTBR-201ENST00000228918 C19orf73Q9NVV2 129 aa11.52□□□□□ -0.57
LTBR-201ENST00000228918 CCDC168Q8NDH2 2452 aa11.51□□□□□ -0.57
LTBR-201ENST00000228918 TRGV2A0A075B6R0 118 aa11.51□□□□□ -0.57
LTBR-201ENST00000228918 RPL35AP18077 110 aaKnown RBP11.51□□□□□ -0.57
LTBR-201ENST00000228918 C2CD3Q4AC94 2353 aa11.51□□□□□ -0.57
LTBR-201ENST00000228918 TRBV6-4A0A1B0GX49 114 aa11.51□□□□□ -0.57
LTBR-201ENST00000228918 IGLV1-51P01701 117 aa11.51□□□□□ -0.57
LTBR-201ENST00000228918 COX7A2LO14548 114 aa11.5□□□□□ -0.57
LTBR-201ENST00000228918 OVOL2Q9BRP0 275 aa11.5□□□□□ -0.57
LTBR-201ENST00000228918 C16orf95Q9H693 158 aa11.5□□□□□ -0.57
LTBR-201ENST00000228918 TRBV7-7A0A0K0K1E9 115 aa11.49□□□□□ -0.57
LTBR-201ENST00000228918 CSNK1G2-AS1Q8NCQ2 148 aa11.49□□□□□ -0.57
LTBR-201ENST00000228918 PPDPFQ9H3Y8 114 aa11.49□□□□□ -0.57
LTBR-201ENST00000228918 NIPBLQ6KC79 2804 aaeCLIP11.49□□□□□ -0.57
LTBR-201ENST00000228918 SETD2Q9BYW2 2564 aaPredicted RBP11.49□□□□□ -0.57
LTBR-201ENST00000228918 RNASE1P07998 156 aaKnown RBP11.48□□□□□ -0.57
LTBR-201ENST00000228918 KRTAP1-1Q07627 177 aa11.48□□□□□ -0.57
LTBR-201ENST00000228918 CHCHD5Q9BSY4 110 aa11.47□□□□□ -0.57
LTBR-201ENST00000228918 TMEM126AQ9H061 195 aa11.47□□□□□ -0.57
LTBR-201ENST00000228918 TRGV4A0A0C4DH28 118 aa11.47□□□□□ -0.57
LTBR-201ENST00000228918 PLA2G2AP14555 144 aa11.46□□□□□ -0.58
LTBR-201ENST00000228918 ANK3Q12955 4377 aaKnown RBP11.45□□□□□ -0.58
LTBR-201ENST00000228918 COX7B2Q8TF08 81 aa11.45□□□□□ -0.58
LTBR-201ENST00000228918 FHL2Q14192 279 aa11.44□□□□□ -0.58
LTBR-201ENST00000228918 IGLV4-60A0A075B6I1 120 aa11.43□□□□□ -0.58
LTBR-201ENST00000228918 TRBV6-8A0A0A6YYG3 113 aa11.43□□□□□ -0.58
LTBR-201ENST00000228918 HIST2H2BCQ6DN03 193 aa11.42□□□□□ -0.58
LTBR-201ENST00000228918 IMUPQ9GZP8 106 aa11.42□□□□□ -0.58
LTBR-201ENST00000228918 TENM4Q6N022 2769 aa11.42□□□□□ -0.58
LTBR-201ENST00000228918 IGKV3OR2-268A0A0C4DH90 116 aa11.42□□□□□ -0.58
LTBR-201ENST00000228918 TRACP01848 142 aa11.42□□□□□ -0.58
LTBR-201ENST00000228918 FAM222AQ5U5X8 452 aa11.42□□□□□ -0.58
LTBR-201ENST00000228918 MIR7-3HGQ8N6C7 128 aa11.41□□□□□ -0.58
LTBR-201ENST00000228918 TOMM7Q9P0U1 55 aa11.41□□□□□ -0.58
LTBR-201ENST00000228918 IGHV3OR16-9A0A0B4J2B5 98 aa11.4□□□□□ -0.58
LTBR-201ENST00000228918 ACANP16112 2415 aa11.4□□□□□ -0.58
LTBR-201ENST00000228918 TRAV13-2A0A0B4J235 113 aa11.4□□□□□ -0.58
LTBR-201ENST00000228918 J3QKU1 62 aa11.4□□□□□ -0.58
LTBR-201ENST00000228918 PF4P02776 101 aa11.4□□□□□ -0.58
LTBR-201ENST00000228918 MTORP42345 2549 aa11.4□□□□□ -0.58
LTBR-201ENST00000228918 HELZ2Q9BYK8 2649 aaKnown RBP11.39□□□□□ -0.59
LTBR-201ENST00000228918 ACYP1P07311 99 aa11.39□□□□□ -0.59
LTBR-201ENST00000228918 FAM218AQ96MZ4 157 aa11.39□□□□□ -0.59
LTBR-201ENST00000228918 PDZD2O15018 2839 aa11.39□□□□□ -0.59
LTBR-201ENST00000228918 CRPP02741 224 aa11.39□□□□□ -0.59
LTBR-201ENST00000228918 GCN1Q92616 2671 aaKnown RBP11.38□□□□□ -0.59
LTBR-201ENST00000228918 RPL28P46779 137 aaKnown RBP11.38□□□□□ -0.59
LTBR-201ENST00000228918 LINC00337Q8N6G1 96 aa11.38□□□□□ -0.59
LTBR-201ENST00000228918 C3orf56Q8N813 242 aa11.38□□□□□ -0.59
LTBR-201ENST00000228918 IGKV2-28A0A075B6P5 120 aa11.38□□□□□ -0.59
LTBR-201ENST00000228918 A0A087WZ39 114 aa11.38□□□□□ -0.59
LTBR-201ENST00000228918 FAM236AA0A1B0GUQ0 79 aa11.38□□□□□ -0.59
LTBR-201ENST00000228918 FAM236BA0A1B0GV22 79 aa11.38□□□□□ -0.59
LTBR-201ENST00000228918 IGKV2D-28P01615 120 aa11.38□□□□□ -0.59
LTBR-201ENST00000228918 SND1-IT1Q9HBX3 110 aa11.38□□□□□ -0.59
LTBR-201ENST00000228918 HILS1P60008 231 aa11.36□□□□□ -0.59
LTBR-201ENST00000228918 KIR2DL5BQ8NHK3 375 aa11.36□□□□□ -0.59
LTBR-201ENST00000228918 BAALC-AS2P0C853 105 aa11.35□□□□□ -0.59
LTBR-201ENST00000228918 LINC00158P58513 81 aa11.35□□□□□ -0.59
LTBR-201ENST00000228918 LINC00612Q8N6U2 182 aa11.35□□□□□ -0.59
LTBR-201ENST00000228918 C22orf24Q9Y442 160 aa11.35□□□□□ -0.59
LTBR-201ENST00000228918 IBA57-AS1B1ANH7 110 aa11.35□□□□□ -0.59
LTBR-201ENST00000228918 DEFB130BP0DP73 79 aa11.35□□□□□ -0.59
LTBR-201ENST00000228918 DEFB130AP0DP74 79 aa11.35□□□□□ -0.59
LTBR-201ENST00000228918 FASNP49327 2511 aaKnown RBP11.35□□□□□ -0.59
LTBR-201ENST00000228918 CCL18P55774 89 aa11.34□□□□□ -0.59
LTBR-201ENST00000228918 C5orf38Q86SI9 138 aa11.34□□□□□ -0.59
LTBR-201ENST00000228918 C3orf22Q8N5N4 141 aa11.34□□□□□ -0.59
LTBR-201ENST00000228918 LINC00959A0A1B0GUT2 108 aa11.34□□□□□ -0.59
LTBR-201ENST00000228918 SMCR5Q8TEV8 140 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms