RNA–Protein interactions for RNA: ENST00000222690.10

H2AFV-201, Transcript of H2A histone family member V, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene H2AFV, Length 3,804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-201ENST00000222690 MIR7-3HGQ8N6C7 128 aa12.29□□□□□ -0.44
H2AFV-201ENST00000222690 C4orf3Q8WVX3 66 aa12.29□□□□□ -0.44
H2AFV-201ENST00000222690 WFDC10AQ9H1F0 79 aa12.29□□□□□ -0.44
H2AFV-201ENST00000222690 IGLV5-45A0A087WSX0 123 aa12.29□□□□□ -0.44
H2AFV-201ENST00000222690 OR13C6PQ8NH95 151 aa12.29□□□□□ -0.44
H2AFV-201ENST00000222690 TMEM243Q9BU79 118 aa12.29□□□□□ -0.44
H2AFV-201ENST00000222690 IGLV5-39A0A0G2JS06 123 aa12.28□□□□□ -0.44
H2AFV-201ENST00000222690 Q6Q795 121 aa12.28□□□□□ -0.44
H2AFV-201ENST00000222690 DNAL4O96015 105 aa12.28□□□□□ -0.44
H2AFV-201ENST00000222690 PLA2G2AP14555 144 aa12.28□□□□□ -0.44
H2AFV-201ENST00000222690 KRTAP10-9P60411 292 aa12.28□□□□□ -0.44
H2AFV-201ENST00000222690 CDC42SE2Q9NRR3 84 aa12.28□□□□□ -0.44
H2AFV-201ENST00000222690 TRGV4A0A0C4DH28 118 aa12.27□□□□□ -0.44
H2AFV-201ENST00000222690 FAM218AQ96MZ4 157 aa12.27□□□□□ -0.44
H2AFV-201ENST00000222690 Q96MF0 132 aa12.26□□□□□ -0.45
H2AFV-201ENST00000222690 HIVEP2P31629 2446 aa12.26□□□□□ -0.45
H2AFV-201ENST00000222690 C5orf38Q86SI9 138 aa12.26□□□□□ -0.45
H2AFV-201ENST00000222690 SND1-IT1Q9HBX3 110 aa12.25□□□□□ -0.45
H2AFV-201ENST00000222690 FLNAP21333 2647 aaKnown RBP12.25□□□□□ -0.45
H2AFV-201ENST00000222690 NBEAL2Q6ZNJ1 2754 aa12.25□□□□□ -0.45
H2AFV-201ENST00000222690 FAM240AA0A1B0GVK7 77 aa12.25□□□□□ -0.45
H2AFV-201ENST00000222690 A8MTW9 85 aa12.24□□□□□ -0.45
H2AFV-201ENST00000222690 ATP5G1P05496 136 aa12.24□□□□□ -0.45
H2AFV-201ENST00000222690 SETXQ7Z333 2677 aaKnown RBP12.24□□□□□ -0.45
H2AFV-201ENST00000222690 A0A096LNT2 108 aa12.23□□□□□ -0.45
H2AFV-201ENST00000222690 PAX4O43316 350 aa12.23□□□□□ -0.45
H2AFV-201ENST00000222690 HERV-K104P63124 156 aa12.23□□□□□ -0.45
H2AFV-201ENST00000222690 COX7B2Q8TF08 81 aa12.23□□□□□ -0.45
H2AFV-201ENST00000222690 CCL24O00175 119 aa12.22□□□□□ -0.45
H2AFV-201ENST00000222690 SHISA2Q6UWI4 295 aa12.22□□□□□ -0.45
H2AFV-201ENST00000222690 TRBV10-1A0A0K0K1A3 114 aa12.22□□□□□ -0.45
H2AFV-201ENST00000222690 HIST2H2BCQ6DN03 193 aa12.22□□□□□ -0.45
H2AFV-201ENST00000222690 SMCR5Q8TEV8 140 aa12.22□□□□□ -0.45
H2AFV-201ENST00000222690 GCN1Q92616 2671 aaKnown RBP12.22□□□□□ -0.45
H2AFV-201ENST00000222690 MRPL23Q16540 153 aaKnown RBP12.21□□□□□ -0.45
H2AFV-201ENST00000222690 ITPR3Q14573 2671 aa12.21□□□□□ -0.45
H2AFV-201ENST00000222690 F5H768 121 aa12.21□□□□□ -0.45
H2AFV-201ENST00000222690 LINC01600Q96MT4 127 aa12.21□□□□□ -0.45
H2AFV-201ENST00000222690 TRAV13-2A0A0B4J235 113 aa12.21□□□□□ -0.46
H2AFV-201ENST00000222690 DEFB130BP0DP73 79 aa12.21□□□□□ -0.46
H2AFV-201ENST00000222690 DEFB130AP0DP74 79 aa12.21□□□□□ -0.46
H2AFV-201ENST00000222690 CLPSL2Q6UWE3 100 aa12.21□□□□□ -0.46
H2AFV-201ENST00000222690 LINC00337Q8N6G1 96 aa12.21□□□□□ -0.46
H2AFV-201ENST00000222690 NOTCH2Q04721 2471 aa12.2□□□□□ -0.46
H2AFV-201ENST00000222690 TRACP01848 142 aa12.19□□□□□ -0.46
H2AFV-201ENST00000222690 ACYP1P07311 99 aa12.19□□□□□ -0.46
H2AFV-201ENST00000222690 IGLV4-60A0A075B6I1 120 aa12.19□□□□□ -0.46
H2AFV-201ENST00000222690 C14orf132Q9NPU4 83 aa12.19□□□□□ -0.46
H2AFV-201ENST00000222690 DEFB121Q5J5C9 76 aa12.19□□□□□ -0.46
H2AFV-201ENST00000222690 MALP21145 153 aa12.18□□□□□ -0.46
H2AFV-201ENST00000222690 A0A096LPF7 62 aa12.18□□□□□ -0.46
H2AFV-201ENST00000222690 A0A087WYN8 130 aa12.17□□□□□ -0.46
H2AFV-201ENST00000222690 SLPIP03973 132 aa12.17□□□□□ -0.46
H2AFV-201ENST00000222690 LINC00643Q86TS7 51 aa12.17□□□□□ -0.46
H2AFV-201ENST00000222690 CSDC2Q9Y534 153 aaKnown RBP12.17□□□□□ -0.46
H2AFV-201ENST00000222690 C6orf226Q5I0X4 101 aa12.17□□□□□ -0.46
H2AFV-201ENST00000222690 C9orf153Q5TBE3 101 aa12.17□□□□□ -0.46
H2AFV-201ENST00000222690 LECT2O14960 151 aa12.17□□□□□ -0.46
H2AFV-201ENST00000222690 INAFM2P0DMQ5 153 aa12.17□□□□□ -0.46
H2AFV-201ENST00000222690 SMIM11BQ8TCY0 68 aa12.17□□□□□ -0.46
H2AFV-201ENST00000222690 TRBV7-7A0A0K0K1E9 115 aa12.16□□□□□ -0.46
H2AFV-201ENST00000222690 XCL1P47992 114 aa12.16□□□□□ -0.46
H2AFV-201ENST00000222690 FSHBP01225 129 aa12.16□□□□□ -0.46
H2AFV-201ENST00000222690 RNASE1P07998 156 aaKnown RBP12.15□□□□□ -0.46
H2AFV-201ENST00000222690 IGKV3D-7A0A0C4DH55 119 aa12.15□□□□□ -0.46
H2AFV-201ENST00000222690 CCL18P55774 89 aa12.14□□□□□ -0.47
H2AFV-201ENST00000222690 SDIM1Q6ZPB5 146 aa12.14□□□□□ -0.47
H2AFV-201ENST00000222690 IGKV2-28A0A075B6P5 120 aa12.14□□□□□ -0.47
H2AFV-201ENST00000222690 IGKV2D-28P01615 120 aa12.14□□□□□ -0.47
H2AFV-201ENST00000222690 DEFB113Q30KQ7 82 aa12.14□□□□□ -0.47
H2AFV-201ENST00000222690 CR1P17927 2039 aa12.14□□□□□ -0.47
H2AFV-201ENST00000222690 DNAJC9-AS1A6NH13 148 aa12.13□□□□□ -0.47
H2AFV-201ENST00000222690 C9orf129Q5T035 196 aaKnown RBP12.12□□□□□ -0.47
H2AFV-201ENST00000222690 SVIPQ8NHG7 77 aa12.12□□□□□ -0.47
H2AFV-201ENST00000222690 C16orf74Q96GX8 76 aa12.12□□□□□ -0.47
H2AFV-201ENST00000222690 NCR3O14931 201 aa12.12□□□□□ -0.47
H2AFV-201ENST00000222690 RPL28P46779 137 aaKnown RBP12.11□□□□□ -0.47
H2AFV-201ENST00000222690 USP24Q9UPU5 2620 aa12.11□□□□□ -0.47
H2AFV-201ENST00000222690 TRAV25A0A0B4J276 109 aa12.11□□□□□ -0.47
H2AFV-201ENST00000222690 TRBV6-8A0A0A6YYG3 113 aa12.1□□□□□ -0.47
H2AFV-201ENST00000222690 APCP25054 2843 aa12.1□□□□□ -0.47
H2AFV-201ENST00000222690 IL17DQ8TAD2 202 aa12.1□□□□□ -0.47
H2AFV-201ENST00000222690 PF4P02776 101 aa12.09□□□□□ -0.47
H2AFV-201ENST00000222690 IMUPQ9GZP8 106 aa12.08□□□□□ -0.48
H2AFV-201ENST00000222690 C22orf24Q9Y442 160 aa12.08□□□□□ -0.48
H2AFV-201ENST00000222690 GIG44P09565 113 aaPredicted RBP12.08□□□□□ -0.48
H2AFV-201ENST00000222690 PRR3P79522 188 aaKnown RBP12.08□□□□□ -0.48
H2AFV-201ENST00000222690 WFDC11Q8NEX6 87 aa12.08□□□□□ -0.48
H2AFV-201ENST00000222690 KLK5Q9Y337 293 aaPredicted RBP12.08□□□□□ -0.48
H2AFV-201ENST00000222690 TRBV6-4A0A1B0GX49 114 aa12.07□□□□□ -0.48
H2AFV-201ENST00000222690 FAM19A3Q7Z5A8 133 aa12.07□□□□□ -0.48
H2AFV-201ENST00000222690 ZNF469Q96JG9 3925 aaPredicted RBP12.07□□□□□ -0.48
H2AFV-201ENST00000222690 IGHV3OR16-9A0A0B4J2B5 98 aa12.07□□□□□ -0.48
H2AFV-201ENST00000222690 IGLV10-54A0A075B6I4 117 aa12.06□□□□□ -0.48
H2AFV-201ENST00000222690 ESM1Q9NQ30 184 aa12.06□□□□□ -0.48
H2AFV-201ENST00000222690 AKAP9Q99996 3911 aa12.06□□□□□ -0.48
H2AFV-201ENST00000222690 GYPEP15421 78 aa12.06□□□□□ -0.48
H2AFV-201ENST00000222690 FAM222AQ5U5X8 452 aa12.06□□□□□ -0.48
H2AFV-201ENST00000222690 A0A087WVE0 104 aa12.05□□□□□ -0.48
H2AFV-201ENST00000222690 HIST1H4AP62805 103 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms