RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 KMT2BQ9UMN6 2715 aaPredicted RBP9.38□□□□□ -0.91
CTNS-201ENST00000046640 TRGV2A0A075B6R0 118 aa9.38□□□□□ -0.91
CTNS-201ENST00000046640 TINCRA0A1B0GVN0 87 aa9.38□□□□□ -0.91
CTNS-201ENST00000046640 COX6CP09669 75 aa9.38□□□□□ -0.91
CTNS-201ENST00000046640 C15orf53Q8NAA6 179 aa9.38□□□□□ -0.91
CTNS-201ENST00000046640 EDA2RQ9HAV5 297 aa9.38□□□□□ -0.91
CTNS-201ENST00000046640 TMEM101Q96IK0 257 aa9.38□□□□□ -0.91
CTNS-201ENST00000046640 Q9H8V8 135 aa9.37□□□□□ -0.91
CTNS-201ENST00000046640 IFITM1P13164 125 aa9.37□□□□□ -0.91
CTNS-201ENST00000046640 TENM1Q9UKZ4 2725 aa9.36□□□□□ -0.91
CTNS-201ENST00000046640 IGKV3OR2-268A0A0C4DH90 116 aa9.36□□□□□ -0.91
CTNS-201ENST00000046640 KRTAP10-3P60369 221 aa9.36□□□□□ -0.91
CTNS-201ENST00000046640 NTM-AS1Q6ZSK4 140 aa9.36□□□□□ -0.91
CTNS-201ENST00000046640 SPANXA1Q9NS26 97 aa9.36□□□□□ -0.91
CTNS-201ENST00000046640 IGLV1-51P01701 117 aa9.35□□□□□ -0.91
CTNS-201ENST00000046640 PIK3CD-AS1Q5SR53 167 aa9.35□□□□□ -0.91
CTNS-201ENST00000046640 SPANXDQ9BXN6 97 aa9.35□□□□□ -0.91
CTNS-201ENST00000046640 SPANXCQ9NY87 97 aa9.35□□□□□ -0.91
CTNS-201ENST00000046640 K7EQD1 137 aa9.35□□□□□ -0.91
CTNS-201ENST00000046640 HILS1P60008 231 aa9.35□□□□□ -0.91
CTNS-201ENST00000046640 RPL36AP83881 106 aaKnown RBP9.35□□□□□ -0.91
CTNS-201ENST00000046640 RPL36ALQ969Q0 106 aaKnown RBP9.35□□□□□ -0.91
CTNS-201ENST00000046640 DNAJC30Q96LL9 226 aa9.35□□□□□ -0.91
CTNS-201ENST00000046640 SMIM20Q8N5G0 67 aa9.34□□□□□ -0.91
CTNS-201ENST00000046640 C16orf95Q9H693 158 aa9.34□□□□□ -0.91
CTNS-201ENST00000046640 C19orf73Q9NVV2 129 aa9.34□□□□□ -0.91
CTNS-201ENST00000046640 MEIG1Q5JSS6 88 aa9.34□□□□□ -0.91
CTNS-201ENST00000046640 SPATA3Q8NHX4 192 aa9.34□□□□□ -0.91
CTNS-201ENST00000046640 ATRQ13535 2644 aa9.34□□□□□ -0.91
CTNS-201ENST00000046640 M0QXV9 152 aa9.34□□□□□ -0.92
CTNS-201ENST00000046640 IL17DQ8TAD2 202 aa9.34□□□□□ -0.92
CTNS-201ENST00000046640 PF4P02776 101 aa9.33□□□□□ -0.92
CTNS-201ENST00000046640 SHISA2Q6UWI4 295 aa9.33□□□□□ -0.92
CTNS-201ENST00000046640 PLAC8L1A1L4L8 177 aa9.33□□□□□ -0.92
CTNS-201ENST00000046640 DEFB130BP0DP73 79 aa9.33□□□□□ -0.92
CTNS-201ENST00000046640 DEFB130AP0DP74 79 aa9.33□□□□□ -0.92
CTNS-201ENST00000046640 HERV-K104P63124 156 aa9.33□□□□□ -0.92
CTNS-201ENST00000046640 CIRBPQ14011 172 aaKnown RBP9.32□□□□□ -0.92
CTNS-201ENST00000046640 LY6G6DO95868 133 aa9.32□□□□□ -0.92
CTNS-201ENST00000046640 TRGV4A0A0C4DH28 118 aa9.31□□□□□ -0.92
CTNS-201ENST00000046640 LINC00242Q5T6M2 205 aa9.31□□□□□ -0.92
CTNS-201ENST00000046640 PRIMA1Q86XR5 153 aa9.31□□□□□ -0.92
CTNS-201ENST00000046640 LINC00308Q8TCZ7 52 aa9.31□□□□□ -0.92
CTNS-201ENST00000046640 LST1O00453 97 aa9.31□□□□□ -0.92
CTNS-201ENST00000046640 SOSTDC1Q6X4U4 206 aa9.3□□□□□ -0.92
CTNS-201ENST00000046640 C3orf56Q8N813 242 aa9.3□□□□□ -0.92
CTNS-201ENST00000046640 CFAP161Q6P656 301 aa9.3□□□□□ -0.92
CTNS-201ENST00000046640 INAFM1C9JVW0 142 aa9.3□□□□□ -0.92
CTNS-201ENST00000046640 NDUFA1O15239 70 aa9.3□□□□□ -0.92
CTNS-201ENST00000046640 Q6Q795 121 aa9.3□□□□□ -0.92
CTNS-201ENST00000046640 CSNK1G2-AS1Q8NCQ2 148 aa9.3□□□□□ -0.92
CTNS-201ENST00000046640 C16orf74Q96GX8 76 aa9.3□□□□□ -0.92
CTNS-201ENST00000046640 LINC00482Q8N8I6 264 aa9.29□□□□□ -0.92
CTNS-201ENST00000046640 TOMM7Q9P0U1 55 aa9.29□□□□□ -0.92
CTNS-201ENST00000046640 NSD1Q96L73 2696 aaPredicted RBP9.29□□□□□ -0.92
CTNS-201ENST00000046640 UBE2L6O14933 153 aa9.29□□□□□ -0.92
CTNS-201ENST00000046640 DAZ2Q13117 558 aaKnown RBP9.28□□□□□ -0.92
CTNS-201ENST00000046640 HIVEP1P15822 2718 aa9.28□□□□□ -0.92
CTNS-201ENST00000046640 DEFB4AO15263 64 aa9.28□□□□□ -0.92
CTNS-201ENST00000046640 DAZ4Q86SG3 579 aaKnown RBP9.28□□□□□ -0.92
CTNS-201ENST00000046640 FAM110AQ9BQ89 295 aa9.28□□□□□ -0.92
CTNS-201ENST00000046640 DAZ3Q9NR90 486 aaKnown RBP9.28□□□□□ -0.92
CTNS-201ENST00000046640 H3BT86 120 aa9.27□□□□□ -0.92
CTNS-201ENST00000046640 A0A096LPF7 62 aa9.27□□□□□ -0.93
CTNS-201ENST00000046640 TRBV10-1A0A0K0K1A3 114 aa9.27□□□□□ -0.93
CTNS-201ENST00000046640 SMIM1B2RUZ4 78 aa9.27□□□□□ -0.93
CTNS-201ENST00000046640 TIRAPP58753 221 aa9.27□□□□□ -0.93
CTNS-201ENST00000046640 HERVK_113P63121 156 aa9.27□□□□□ -0.93
CTNS-201ENST00000046640 CHCHD5Q9BSY4 110 aa9.27□□□□□ -0.93
CTNS-201ENST00000046640 CDC42SE2Q9NRR3 84 aa9.26□□□□□ -0.93
CTNS-201ENST00000046640 TRRAPQ9Y4A5 3859 aa9.26□□□□□ -0.93
CTNS-201ENST00000046640 CMC4P56277 68 aaPredicted RBP9.26□□□□□ -0.93
CTNS-201ENST00000046640 TMEM243Q9BU79 118 aa9.26□□□□□ -0.93
CTNS-201ENST00000046640 Q9HAA7 133 aa9.26□□□□□ -0.93
CTNS-201ENST00000046640 LINC01600Q96MT4 127 aa9.25□□□□□ -0.93
CTNS-201ENST00000046640 IGLV4-60A0A075B6I1 120 aa9.24□□□□□ -0.93
CTNS-201ENST00000046640 TIMM17BO60830 172 aa9.24□□□□□ -0.93
CTNS-201ENST00000046640 FHL2Q14192 279 aa9.24□□□□□ -0.93
CTNS-201ENST00000046640 C11orf68Q9H3H3 251 aaKnown RBP9.24□□□□□ -0.93
CTNS-201ENST00000046640 IGLV5-45A0A087WSX0 123 aa9.23□□□□□ -0.93
CTNS-201ENST00000046640 FAM218AQ96MZ4 157 aa9.23□□□□□ -0.93
CTNS-201ENST00000046640 IGLV5-39A0A0G2JS06 123 aa9.22□□□□□ -0.93
CTNS-201ENST00000046640 COX7A2LO14548 114 aa9.22□□□□□ -0.93
CTNS-201ENST00000046640 BAALC-AS2P0C853 105 aa9.22□□□□□ -0.93
CTNS-201ENST00000046640 OVOL2Q9BRP0 275 aa9.22□□□□□ -0.93
CTNS-201ENST00000046640 TEP1Q99973 2627 aaKnown RBP9.22□□□□□ -0.93
CTNS-201ENST00000046640 TRBV6-4A0A1B0GX49 114 aa9.22□□□□□ -0.93
CTNS-201ENST00000046640 FLNBO75369 2602 aaKnown RBP9.21□□□□□ -0.93
CTNS-201ENST00000046640 CLPSL2Q6UWE3 100 aa9.21□□□□□ -0.94
CTNS-201ENST00000046640 DEFB135Q30KP9 77 aa9.2□□□□□ -0.94
CTNS-201ENST00000046640 MIR7-3HGQ8N6C7 128 aa9.2□□□□□ -0.94
CTNS-201ENST00000046640 PFN2P35080 140 aa9.2□□□□□ -0.94
CTNS-201ENST00000046640 LINC00158P58513 81 aa9.2□□□□□ -0.94
CTNS-201ENST00000046640 TRBV6-8A0A0A6YYG3 113 aa9.19□□□□□ -0.94
CTNS-201ENST00000046640 F5H768 121 aa9.19□□□□□ -0.94
CTNS-201ENST00000046640 GYPEP15421 78 aa9.19□□□□□ -0.94
CTNS-201ENST00000046640 SMCR5Q8TEV8 140 aa9.19□□□□□ -0.94
CTNS-201ENST00000046640 CSDC2Q9Y534 153 aaKnown RBP9.19□□□□□ -0.94
CTNS-201ENST00000046640 MRPL23Q16540 153 aaKnown RBP9.19□□□□□ -0.94
CTNS-201ENST00000046640 C5orf38Q86SI9 138 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms