RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 UBE2D4Q9Y2X8 147 aa15.42■□□□□ 0.06
HOXC8-201ENST00000040584 LOC107984156A0A0G2JMH3 177 aa15.42■□□□□ 0.06
HOXC8-201ENST00000040584 GAGE12JA6NER3 117 aa15.42■□□□□ 0.06
HOXC8-201ENST00000040584 F5H768 121 aa15.42■□□□□ 0.06
HOXC8-201ENST00000040584 GAGE4Q13068 117 aa15.42■□□□□ 0.06
HOXC8-201ENST00000040584 GAGE5Q13069 117 aa15.42■□□□□ 0.06
HOXC8-201ENST00000040584 ARL17AQ8IVW1 177 aa15.42■□□□□ 0.06
HOXC8-201ENST00000040584 ATP6V0E2Q8NHE4 81 aa15.42■□□□□ 0.06
HOXC8-201ENST00000040584 COL7A1Q02388 2944 aa15.41■□□□□ 0.06
HOXC8-201ENST00000040584 PRKDCP78527 4128 aaKnown RBP15.41■□□□□ 0.06
HOXC8-201ENST00000040584 IGHV1-58A0A0C4DH39 117 aa15.41■□□□□ 0.06
HOXC8-201ENST00000040584 NANOS2P60321 138 aaKnown RBP15.41■□□□□ 0.06
HOXC8-201ENST00000040584 FAM104AQ969W3 186 aa15.41■□□□□ 0.06
HOXC8-201ENST00000040584 PRO0255Q9UI72 69 aa15.41■□□□□ 0.06
HOXC8-201ENST00000040584 A0A0B4J2C4 111 aa15.4■□□□□ 0.06
HOXC8-201ENST00000040584 IGHV3-30-3P0DP02 117 aa15.4■□□□□ 0.06
HOXC8-201ENST00000040584 RPL36AP83881 106 aaKnown RBP15.4■□□□□ 0.06
HOXC8-201ENST00000040584 Q6ZTC4 211 aa15.4■□□□□ 0.06
HOXC8-201ENST00000040584 RPL36ALQ969Q0 106 aaKnown RBP15.4■□□□□ 0.06
HOXC8-201ENST00000040584 IGHV3-38A0A0C4DH36 116 aa15.39■□□□□ 0.05
HOXC8-201ENST00000040584 PSMB2P49721 201 aa15.39■□□□□ 0.05
HOXC8-201ENST00000040584 A0A0J9YXY3 114 aa15.38■□□□□ 0.05
HOXC8-201ENST00000040584 ETDBQ3ZM63 59 aa15.38■□□□□ 0.05
HOXC8-201ENST00000040584 PAX4O43316 350 aa15.37■□□□□ 0.05
HOXC8-201ENST00000040584 SMAGPQ0VAQ4 97 aa15.37■□□□□ 0.05
HOXC8-201ENST00000040584 GYPEP15421 78 aa15.37■□□□□ 0.05
HOXC8-201ENST00000040584 VSIG2Q96IQ7 327 aa15.37■□□□□ 0.05
HOXC8-201ENST00000040584 TRAV26-1A0A087WT03 109 aa15.36■□□□□ 0.05
HOXC8-201ENST00000040584 A4D1N5 150 aa15.36■□□□□ 0.05
HOXC8-201ENST00000040584 TIRAPP58753 221 aa15.36■□□□□ 0.05
HOXC8-201ENST00000040584 NHLRC4P0CG21 123 aaPredicted RBP15.35■□□□□ 0.05
HOXC8-201ENST00000040584 LINC00694P0DN24 101 aa15.35■□□□□ 0.05
HOXC8-201ENST00000040584 DAZ4Q86SG3 579 aaKnown RBP15.35■□□□□ 0.05
HOXC8-201ENST00000040584 MUSTN1Q8IVN3 82 aa15.35■□□□□ 0.05
HOXC8-201ENST00000040584 DAZ3Q9NR90 486 aaKnown RBP15.35■□□□□ 0.05
HOXC8-201ENST00000040584 SH2D6Q7Z4S9 175 aa15.35■□□□□ 0.05
HOXC8-201ENST00000040584 GEMIN7Q9H840 131 aaKnown RBP15.35■□□□□ 0.05
HOXC8-201ENST00000040584 ERG28Q9UKR5 140 aa15.35■□□□□ 0.05
HOXC8-201ENST00000040584 IGHV3-64A0A075B6Q5 118 aa15.34■□□□□ 0.05
HOXC8-201ENST00000040584 SCGB1C2P0DMR2 95 aa15.34■□□□□ 0.05
HOXC8-201ENST00000040584 DGAT2L7PQ6IED9 249 aa15.33■□□□□ 0.05
HOXC8-201ENST00000040584 CEMP1Q6PRD7 247 aaPredicted RBP15.33■□□□□ 0.05
HOXC8-201ENST00000040584 SPANXDQ9BXN6 97 aa15.33■□□□□ 0.05
HOXC8-201ENST00000040584 SPANXCQ9NY87 97 aa15.33■□□□□ 0.05
HOXC8-201ENST00000040584 IGHV3-33P01772 117 aa15.33■□□□□ 0.04
HOXC8-201ENST00000040584 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.32■□□□□ 0.04
HOXC8-201ENST00000040584 IGKV2-29A2NJV5 120 aaPredicted RBP15.32■□□□□ 0.04
HOXC8-201ENST00000040584 TIMM17BO60830 172 aa15.32■□□□□ 0.04
HOXC8-201ENST00000040584 NDUFA12Q9UI09 145 aa15.32■□□□□ 0.04
HOXC8-201ENST00000040584 CSDC2Q9Y534 153 aaKnown RBP15.32■□□□□ 0.04
HOXC8-201ENST00000040584 SIGMAR1Q99720 223 aa15.31■□□□□ 0.04
HOXC8-201ENST00000040584 IGLV5-45A0A087WSX0 123 aa15.31■□□□□ 0.04
HOXC8-201ENST00000040584 DEFB131BA0A096LNP1 70 aa15.3■□□□□ 0.04
HOXC8-201ENST00000040584 GAGE12HA6NDE8 117 aa15.3■□□□□ 0.04
HOXC8-201ENST00000040584 M0QXV9 152 aa15.3■□□□□ 0.04
HOXC8-201ENST00000040584 TCL1BO95988 128 aa15.3■□□□□ 0.04
HOXC8-201ENST00000040584 ZFAND6Q6FIF0 208 aa15.3■□□□□ 0.04
HOXC8-201ENST00000040584 STAB2Q8WWQ8 2551 aa15.3■□□□□ 0.04
HOXC8-201ENST00000040584 A0A096LPF7 62 aa15.29■□□□□ 0.04
HOXC8-201ENST00000040584 SCGB1A1P11684 91 aa15.29■□□□□ 0.04
HOXC8-201ENST00000040584 FOXI1Q12951 378 aa15.29■□□□□ 0.04
HOXC8-201ENST00000040584 Q6ZUT4 128 aa15.29■□□□□ 0.04
HOXC8-201ENST00000040584 FAM19A3Q7Z5A8 133 aa15.29■□□□□ 0.04
HOXC8-201ENST00000040584 HERVK_113P63121 156 aa15.29■□□□□ 0.04
HOXC8-201ENST00000040584 LITAFQ99732 161 aa15.29■□□□□ 0.04
HOXC8-201ENST00000040584 TRAV8-3A0A0A6YYJ7 113 aa15.28■□□□□ 0.04
HOXC8-201ENST00000040584 IFITM1P13164 125 aa15.28■□□□□ 0.04
HOXC8-201ENST00000040584 SMCPP49901 116 aaPredicted RBP15.28■□□□□ 0.04
HOXC8-201ENST00000040584 NTM-AS1Q6ZSK4 140 aa15.28■□□□□ 0.04
HOXC8-201ENST00000040584 GTSF1LQ9H1H1 148 aa15.27■□□□□ 0.04
HOXC8-201ENST00000040584 MIAQ16674 131 aa15.27■□□□□ 0.03
HOXC8-201ENST00000040584 RNASE13Q5GAN3 156 aaKnown RBP15.27■□□□□ 0.03
HOXC8-201ENST00000040584 SFTA2Q6UW10 78 aa15.26■□□□□ 0.03
HOXC8-201ENST00000040584 TEN1Q86WV5 123 aa15.26■□□□□ 0.03
HOXC8-201ENST00000040584 TRBV30A0A0K0K1B3 111 aa15.25■□□□□ 0.03
HOXC8-201ENST00000040584 CIRBPQ14011 172 aaKnown RBP15.25■□□□□ 0.03
HOXC8-201ENST00000040584 MTURNQ8N3F0 131 aa15.25■□□□□ 0.03
HOXC8-201ENST00000040584 PPDPFLQ8WWR9 84 aa15.25■□□□□ 0.03
HOXC8-201ENST00000040584 TRAV10A0A0B4J240 114 aa15.25■□□□□ 0.03
HOXC8-201ENST00000040584 PRSS2P07478 247 aa15.25■□□□□ 0.03
HOXC8-201ENST00000040584 SPINK8P0C7L1 97 aa15.25■□□□□ 0.03
HOXC8-201ENST00000040584 ICOSQ9Y6W8 199 aa15.25■□□□□ 0.03
HOXC8-201ENST00000040584 NDUFA1O15239 70 aa15.24■□□□□ 0.03
HOXC8-201ENST00000040584 MRPL23Q16540 153 aaKnown RBP15.24■□□□□ 0.03
HOXC8-201ENST00000040584 COPS9Q8WXC6 57 aa15.23■□□□□ 0.03
HOXC8-201ENST00000040584 ATXN8Q156A1 80 aa15.23■□□□□ 0.03
HOXC8-201ENST00000040584 CDKN2A-AS1Q9UH64 79 aa15.23■□□□□ 0.03
HOXC8-201ENST00000040584 H3BNG1 76 aa15.22■□□□□ 0.03
HOXC8-201ENST00000040584 H7C423 109 aa15.22■□□□□ 0.03
HOXC8-201ENST00000040584 Q1RN00 199 aa15.22■□□□□ 0.03
HOXC8-201ENST00000040584 FBN3Q75N90 2809 aa15.22■□□□□ 0.03
HOXC8-201ENST00000040584 TRBV6-8A0A0A6YYG3 113 aa15.21■□□□□ 0.03
HOXC8-201ENST00000040584 EIF4EBP3O60516 100 aaPredicted RBP15.21■□□□□ 0.03
HOXC8-201ENST00000040584 TMEM101Q96IK0 257 aa15.21■□□□□ 0.03
HOXC8-201ENST00000040584 LINC01600Q96MT4 127 aa15.2■□□□□ 0.02
HOXC8-201ENST00000040584 IGLV5-39A0A0G2JS06 123 aa15.2■□□□□ 0.02
HOXC8-201ENST00000040584 COX6CP09669 75 aa15.2■□□□□ 0.02
HOXC8-201ENST00000040584 ADAMTSL4-AS1Q5T5F5 129 aa15.19■□□□□ 0.02
HOXC8-201ENST00000040584 TMEM243Q9BU79 118 aa15.19■□□□□ 0.02
HOXC8-201ENST00000040584 LINC00242Q5T6M2 205 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms