RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 MIAQ16674 131 aa4.22□□□□□ -1.73
SCARB2-218ENST00000639715 LRRK2Q5S007 2527 aa4.22□□□□□ -1.73
SCARB2-218ENST00000639715 PKD1L2Q7Z442 2459 aa4.22□□□□□ -1.73
SCARB2-218ENST00000639715 IGLV2-18A0A075B6J9 118 aa4.22□□□□□ -1.73
SCARB2-218ENST00000639715 IGHV4-30-2A0A087WSY4 118 aa4.22□□□□□ -1.73
SCARB2-218ENST00000639715 RNF223E7ERA6 249 aa4.22□□□□□ -1.73
SCARB2-218ENST00000639715 PF4P02776 101 aa4.22□□□□□ -1.73
SCARB2-218ENST00000639715 SS18Q15532 418 aa4.22□□□□□ -1.73
SCARB2-218ENST00000639715 RNASE13Q5GAN3 156 aaKnown RBP4.22□□□□□ -1.73
SCARB2-218ENST00000639715 UNQ9165/PRO28630Q6UXU0 137 aa4.22□□□□□ -1.73
SCARB2-218ENST00000639715 UPK3BQ9BT76 320 aa4.22□□□□□ -1.73
SCARB2-218ENST00000639715 IGHV4-4A0A075B6R2 117 aa4.22□□□□□ -1.73
SCARB2-218ENST00000639715 IGKV3OR2-268A0A0C4DH90 116 aa4.22□□□□□ -1.73
SCARB2-218ENST00000639715 TRBV12-3P01733 135 aa4.22□□□□□ -1.73
SCARB2-218ENST00000639715 TMEM61Q8N0U2 210 aa4.22□□□□□ -1.73
SCARB2-218ENST00000639715 UBE2E2Q96LR5 201 aa4.22□□□□□ -1.73
SCARB2-218ENST00000639715 TOMM7Q9P0U1 55 aa4.22□□□□□ -1.73
SCARB2-218ENST00000639715 IGF2RP11717 2491 aa4.22□□□□□ -1.73
SCARB2-218ENST00000639715 MRGPRG-AS1Q2M3A8 158 aa4.21□□□□□ -1.73
SCARB2-218ENST00000639715 SPTSSBQ8NFR3 76 aa4.21□□□□□ -1.73
SCARB2-218ENST00000639715 TRANK1O15050 2925 aa4.21□□□□□ -1.74
SCARB2-218ENST00000639715 OXTP01178 125 aa4.21□□□□□ -1.74
SCARB2-218ENST00000639715 PCSK5Q92824 1860 aa4.21□□□□□ -1.74
SCARB2-218ENST00000639715 PLA2G2AP14555 144 aa4.21□□□□□ -1.74
SCARB2-218ENST00000639715 HILS1P60008 231 aa4.21□□□□□ -1.74
SCARB2-218ENST00000639715 CDSNQ15517 529 aa4.21□□□□□ -1.74
SCARB2-218ENST00000639715 ZFAND2AQ8N6M9 145 aa4.21□□□□□ -1.74
SCARB2-218ENST00000639715 CYSTM1Q9H1C7 97 aa4.21□□□□□ -1.74
SCARB2-218ENST00000639715 LINC00474Q9P2X8 69 aa4.21□□□□□ -1.74
SCARB2-218ENST00000639715 A0A0J9YX75 114 aa4.2□□□□□ -1.74
SCARB2-218ENST00000639715 PAX4O43316 350 aa4.2□□□□□ -1.74
SCARB2-218ENST00000639715 LINC00158P58513 81 aa4.2□□□□□ -1.74
SCARB2-218ENST00000639715 DEFB121Q5J5C9 76 aa4.2□□□□□ -1.74
SCARB2-218ENST00000639715 LINC00482Q8N8I6 264 aa4.2□□□□□ -1.74
SCARB2-218ENST00000639715 TRAV13-2A0A0B4J235 113 aa4.2□□□□□ -1.74
SCARB2-218ENST00000639715 Q9H8V8 135 aa4.2□□□□□ -1.74
SCARB2-218ENST00000639715 CEP295Q9C0D2 2601 aa4.2□□□□□ -1.74
SCARB2-218ENST00000639715 IGLV4-69A0A075B6H9 119 aa4.2□□□□□ -1.74
SCARB2-218ENST00000639715 LINC00846Q9NV44 126 aa4.2□□□□□ -1.74
SCARB2-218ENST00000639715 NCR3O14931 201 aa4.19□□□□□ -1.74
SCARB2-218ENST00000639715 LECT2O14960 151 aa4.19□□□□□ -1.74
SCARB2-218ENST00000639715 NDUFC1O43677 76 aa4.19□□□□□ -1.74
SCARB2-218ENST00000639715 DCANP1Q8TF63 244 aa4.19□□□□□ -1.74
SCARB2-218ENST00000639715 RMI2Q96E14 147 aa4.19□□□□□ -1.74
SCARB2-218ENST00000639715 IGHV1-58A0A0C4DH39 117 aa4.19□□□□□ -1.74
SCARB2-218ENST00000639715 CCKP06307 115 aa4.19□□□□□ -1.74
SCARB2-218ENST00000639715 ATP5EP56381 51 aaPredicted RBP4.19□□□□□ -1.74
SCARB2-218ENST00000639715 RAI1Q7Z5J4 1906 aaPredicted RBP4.19□□□□□ -1.74
SCARB2-218ENST00000639715 TRAV7A0A075B6U4 112 aa4.19□□□□□ -1.74
SCARB2-218ENST00000639715 LINC01546A6NGU7 62 aa4.19□□□□□ -1.74
SCARB2-218ENST00000639715 PRB2P02812 416 aaPredicted RBP4.19□□□□□ -1.74
SCARB2-218ENST00000639715 CD164Q04900 197 aa4.19□□□□□ -1.74
SCARB2-218ENST00000639715 C11orf44Q8N8P7 122 aa4.19□□□□□ -1.74
SCARB2-218ENST00000639715 C20orf203Q8NBC4 194 aa4.19□□□□□ -1.74
SCARB2-218ENST00000639715 ORMDL1Q9P0S3 153 aa4.19□□□□□ -1.74
SCARB2-218ENST00000639715 BRCA2P51587 3418 aa4.19□□□□□ -1.74
SCARB2-218ENST00000639715 IGHV4OR15-8A0A075B7B6 117 aa4.18□□□□□ -1.74
SCARB2-218ENST00000639715 A0A087WW49 117 aa4.18□□□□□ -1.74
SCARB2-218ENST00000639715 CLPSL1A2RUU4 121 aa4.18□□□□□ -1.74
SCARB2-218ENST00000639715 F8W735 103 aaPredicted RBP4.18□□□□□ -1.74
SCARB2-218ENST00000639715 PIK3CD-AS1Q5SR53 167 aa4.18□□□□□ -1.74
SCARB2-218ENST00000639715 ADAMTSL4-AS1Q5T5F5 129 aa4.18□□□□□ -1.74
SCARB2-218ENST00000639715 FAM19A1Q7Z5A9 133 aa4.18□□□□□ -1.74
SCARB2-218ENST00000639715 FASNP49327 2511 aaKnown RBP4.18□□□□□ -1.74
SCARB2-218ENST00000639715 LRCOL1A6NCL2 159 aa4.18□□□□□ -1.74
SCARB2-218ENST00000639715 FUSP35637 526 aaKnown RBP eCLIP4.18□□□□□ -1.74
SCARB2-218ENST00000639715 ATP5EP2Q5VTU8 51 aa4.18□□□□□ -1.74
SCARB2-218ENST00000639715 C11orf21Q9P2W6 132 aa4.18□□□□□ -1.74
SCARB2-218ENST00000639715 A8MZ25 164 aa4.18□□□□□ -1.74
SCARB2-218ENST00000639715 H0YGX0 51 aa4.18□□□□□ -1.74
SCARB2-218ENST00000639715 IGHV3-53P01767 116 aa4.18□□□□□ -1.74
SCARB2-218ENST00000639715 DEFB1P60022 68 aa4.18□□□□□ -1.74
SCARB2-218ENST00000639715 MAPK1IP1LQ8NDC0 245 aa4.18□□□□□ -1.74
SCARB2-218ENST00000639715 ANKRD11Q6UB99 2663 aaPredicted RBP4.18□□□□□ -1.74
SCARB2-218ENST00000639715 IGHV3-16A0A0C4DH30 117 aa4.18□□□□□ -1.74
SCARB2-218ENST00000639715 TRBV6-5A0A0K0K1A5 114 aa4.18□□□□□ -1.74
SCARB2-218ENST00000639715 K7EQG2 157 aa4.18□□□□□ -1.74
SCARB2-218ENST00000639715 C2CD3Q4AC94 2353 aa4.17□□□□□ -1.74
SCARB2-218ENST00000639715 ABCA2Q9BZC7 2435 aa4.17□□□□□ -1.74
SCARB2-218ENST00000639715 TRBV27A0A0K0K1C4 114 aa4.17□□□□□ -1.74
SCARB2-218ENST00000639715 C4orf48Q5BLP8 95 aa4.17□□□□□ -1.74
SCARB2-218ENST00000639715 HIST2H2BCQ6DN03 193 aa4.17□□□□□ -1.74
SCARB2-218ENST00000639715 HIST2H2BDQ6DRA6 164 aa4.17□□□□□ -1.74
SCARB2-218ENST00000639715 IGIPA6NJ69 53 aa4.17□□□□□ -1.74
SCARB2-218ENST00000639715 Q96MF0 132 aa4.17□□□□□ -1.74
SCARB2-218ENST00000639715 PSMG3-AS1Q96PY0 264 aa4.17□□□□□ -1.74
SCARB2-218ENST00000639715 J3QKU1 62 aa4.17□□□□□ -1.74
SCARB2-218ENST00000639715 FAM222AQ5U5X8 452 aa4.17□□□□□ -1.74
SCARB2-218ENST00000639715 ZNF580Q9UK33 172 aa4.17□□□□□ -1.74
SCARB2-218ENST00000639715 C5orf42Q9H799 3197 aa4.17□□□□□ -1.74
SCARB2-218ENST00000639715 C19orf84I3L1E1 186 aa4.16□□□□□ -1.74
SCARB2-218ENST00000639715 SLPIP03973 132 aa4.16□□□□□ -1.74
SCARB2-218ENST00000639715 MIFP14174 115 aa4.16□□□□□ -1.74
SCARB2-218ENST00000639715 LINC00308Q8TCZ7 52 aa4.16□□□□□ -1.74
SCARB2-218ENST00000639715 UBE2D4Q9Y2X8 147 aa4.16□□□□□ -1.74
SCARB2-218ENST00000639715 A0A087WZ39 114 aa4.16□□□□□ -1.74
SCARB2-218ENST00000639715 IGHV3-38A0A0C4DH36 116 aa4.16□□□□□ -1.74
SCARB2-218ENST00000639715 KLLNB2CW77 178 aa4.16□□□□□ -1.74
SCARB2-218ENST00000639715 JMJD7-PLA2G4BH0Y9G9 81 aa4.16□□□□□ -1.74
SCARB2-218ENST00000639715 PRRC2CQ9Y520 2896 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms