RNA–Protein interactions for RNA: ENST00000638443.1

ATM-226, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 2,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-226ENST00000638443 TRAV4A0A0B4J268 109 aa7.01□□□□□ -1.29
ATM-226ENST00000638443 DEFB130BP0DP73 79 aa7.01□□□□□ -1.29
ATM-226ENST00000638443 DEFB130AP0DP74 79 aa7.01□□□□□ -1.29
ATM-226ENST00000638443 CEMP1Q6PRD7 247 aaPredicted RBP7.01□□□□□ -1.29
ATM-226ENST00000638443 Q6ZN92 141 aa7.01□□□□□ -1.29
ATM-226ENST00000638443 SLC25A29Q8N8R3 303 aa7.01□□□□□ -1.29
ATM-226ENST00000638443 IGIPA6NJ69 53 aa7.01□□□□□ -1.29
ATM-226ENST00000638443 K7EMI3 77 aa7.01□□□□□ -1.29
ATM-226ENST00000638443 NPSP0C0P6 89 aa7.01□□□□□ -1.29
ATM-226ENST00000638443 ZNRF2Q8NHG8 242 aa7.01□□□□□ -1.29
ATM-226ENST00000638443 OVOL2Q9BRP0 275 aa7.01□□□□□ -1.29
ATM-226ENST00000638443 K7EQD1 137 aa7□□□□□ -1.29
ATM-226ENST00000638443 ZNF25P17030 456 aaPredicted RBP7□□□□□ -1.29
ATM-226ENST00000638443 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7□□□□□ -1.29
ATM-226ENST00000638443 A0A087WX48 190 aa7□□□□□ -1.29
ATM-226ENST00000638443 IGKV2D-26A0A0A0MRZ7 120 aa7□□□□□ -1.29
ATM-226ENST00000638443 IGKV2-29A2NJV5 120 aaPredicted RBP7□□□□□ -1.29
ATM-226ENST00000638443 GAGE12JA6NER3 117 aa7□□□□□ -1.29
ATM-226ENST00000638443 GAGE4Q13068 117 aa7□□□□□ -1.29
ATM-226ENST00000638443 GAGE5Q13069 117 aa7□□□□□ -1.29
ATM-226ENST00000638443 RNASE13Q5GAN3 156 aaKnown RBP7□□□□□ -1.29
ATM-226ENST00000638443 C20orf203Q8NBC4 194 aa7□□□□□ -1.29
ATM-226ENST00000638443 SIGMAR1Q99720 223 aa7□□□□□ -1.29
ATM-226ENST00000638443 TTTY13Q9BZ97 58 aa7□□□□□ -1.29
ATM-226ENST00000638443 HHLA3Q9XRX5 114 aa7□□□□□ -1.29
ATM-226ENST00000638443 DNAH3Q8TD57 4116 aa6.99□□□□□ -1.29
ATM-226ENST00000638443 IGKCP01834 107 aa6.99□□□□□ -1.29
ATM-226ENST00000638443 APOC4P55056 127 aa6.99□□□□□ -1.29
ATM-226ENST00000638443 CHCHD7Q9BUK0 85 aa6.99□□□□□ -1.29
ATM-226ENST00000638443 UQCR10Q9UDW1 63 aa6.99□□□□□ -1.29
ATM-226ENST00000638443 IGHV4-28A0A0C4DH34 117 aa6.98□□□□□ -1.29
ATM-226ENST00000638443 CD164Q04900 197 aa6.98□□□□□ -1.29
ATM-226ENST00000638443 RHOHQ15669 191 aa6.98□□□□□ -1.29
ATM-226ENST00000638443 FAM222AQ5U5X8 452 aa6.98□□□□□ -1.29
ATM-226ENST00000638443 SNHG12Q9BXW3 62 aa6.98□□□□□ -1.29
ATM-226ENST00000638443 CELA1Q9UNI1 258 aa6.98□□□□□ -1.29
ATM-226ENST00000638443 DPM2O94777 84 aa6.98□□□□□ -1.29
ATM-226ENST00000638443 PRB2P02812 416 aaPredicted RBP6.98□□□□□ -1.29
ATM-226ENST00000638443 NMUP48645 174 aa6.98□□□□□ -1.29
ATM-226ENST00000638443 HNRNPA3P51991 378 aaKnown RBP6.98□□□□□ -1.29
ATM-226ENST00000638443 PCP2Q8IVA1 136 aa6.98□□□□□ -1.29
ATM-226ENST00000638443 FAM104AQ969W3 186 aa6.98□□□□□ -1.29
ATM-226ENST00000638443 TRBV7-3A0A075B6L6 115 aa6.97□□□□□ -1.29
ATM-226ENST00000638443 TRGV4A0A0C4DH28 118 aa6.97□□□□□ -1.29
ATM-226ENST00000638443 F8VRH5 84 aa6.97□□□□□ -1.29
ATM-226ENST00000638443 FHL2Q14192 279 aa6.97□□□□□ -1.29
ATM-226ENST00000638443 FAM19A5Q7Z5A7 132 aaPredicted RBP6.97□□□□□ -1.29
ATM-226ENST00000638443 IGLV4-69A0A075B6H9 119 aa6.97□□□□□ -1.29
ATM-226ENST00000638443 TRAV12-1A0A0B4J245 112 aa6.97□□□□□ -1.29
ATM-226ENST00000638443 FGF6P10767 208 aa6.97□□□□□ -1.29
ATM-226ENST00000638443 EGFEM1PQ0D2K5 195 aa6.97□□□□□ -1.29
ATM-226ENST00000638443 NTM-AS1Q6ZSK4 140 aa6.97□□□□□ -1.29
ATM-226ENST00000638443 Q8NAQ8 132 aa6.97□□□□□ -1.29
ATM-226ENST00000638443 TIMM17AQ99595 171 aa6.97□□□□□ -1.29
ATM-226ENST00000638443 TM2D2Q9BX73 214 aa6.97□□□□□ -1.29
ATM-226ENST00000638443 SPANXB1Q9NS25 103 aaPredicted RBP6.97□□□□□ -1.29
ATM-226ENST00000638443 IGLV4-3A0A075B6K6 122 aa6.96□□□□□ -1.3
ATM-226ENST00000638443 BATFQ16520 125 aa6.96□□□□□ -1.3
ATM-226ENST00000638443 LINC00612Q8N6U2 182 aa6.96□□□□□ -1.3
ATM-226ENST00000638443 DNAJC30Q96LL9 226 aa6.96□□□□□ -1.3
ATM-226ENST00000638443 C11orf86A6NJI1 115 aa6.95□□□□□ -1.3
ATM-226ENST00000638443 LINC00694P0DN24 101 aa6.95□□□□□ -1.3
ATM-226ENST00000638443 UBE2D3P61077 147 aa6.95□□□□□ -1.3
ATM-226ENST00000638443 UBE2D2P62837 147 aa6.95□□□□□ -1.3
ATM-226ENST00000638443 RPL36AP83881 106 aaKnown RBP6.95□□□□□ -1.3
ATM-226ENST00000638443 PAPPA-AS1Q5QFB9 102 aa6.95□□□□□ -1.3
ATM-226ENST00000638443 SLC25A34Q6PIV7 304 aa6.95□□□□□ -1.3
ATM-226ENST00000638443 RPL36ALQ969Q0 106 aaKnown RBP6.95□□□□□ -1.3
ATM-226ENST00000638443 CST9LQ9H4G1 147 aa6.95□□□□□ -1.3
ATM-226ENST00000638443 COX8AP10176 69 aa6.95□□□□□ -1.3
ATM-226ENST00000638443 CKS1BP61024 79 aa6.95□□□□□ -1.3
ATM-226ENST00000638443 PMVKQ15126 192 aa6.95□□□□□ -1.3
ATM-226ENST00000638443 TMEM97Q5BJF2 176 aa6.95□□□□□ -1.3
ATM-226ENST00000638443 Q6ZUT4 128 aa6.95□□□□□ -1.3
ATM-226ENST00000638443 C2orf91Q6ZV80 131 aa6.95□□□□□ -1.3
ATM-226ENST00000638443 PRO0628Q9UI54 55 aa6.95□□□□□ -1.3
ATM-226ENST00000638443 UBE2D4Q9Y2X8 147 aa6.95□□□□□ -1.3
ATM-226ENST00000638443 TRBV10-1A0A0K0K1A3 114 aa6.94□□□□□ -1.3
ATM-226ENST00000638443 TRBV6-4A0A1B0GX49 114 aa6.94□□□□□ -1.3
ATM-226ENST00000638443 TMEM141Q96I45 108 aa6.94□□□□□ -1.3
ATM-226ENST00000638443 NOTCH1P46531 2555 aa6.94□□□□□ -1.3
ATM-226ENST00000638443 A0A096LPF7 62 aa6.94□□□□□ -1.3
ATM-226ENST00000638443 PLNP26678 52 aa6.94□□□□□ -1.3
ATM-226ENST00000638443 HINT1P49773 126 aaPredicted RBP6.93□□□□□ -1.3
ATM-226ENST00000638443 A0A0J9YY99 117 aa6.92□□□□□ -1.3
ATM-226ENST00000638443 TRAV8-6A0A0B4J262 113 aa6.92□□□□□ -1.3
ATM-226ENST00000638443 A0A0J9YXV3 536 aa6.92□□□□□ -1.3
ATM-226ENST00000638443 M0R143 59 aa6.92□□□□□ -1.3
ATM-226ENST00000638443 MAPKAPK5-AS1Q8N8E1 139 aa6.92□□□□□ -1.3
ATM-226ENST00000638443 SPATA25Q9BR10 227 aa6.92□□□□□ -1.3
ATM-226ENST00000638443 CHAC1Q9BUX1 264 aa6.92□□□□□ -1.3
ATM-226ENST00000638443 TENM3Q9P273 2699 aa6.92□□□□□ -1.3
ATM-226ENST00000638443 LYRM9A8MSI8 78 aa6.91□□□□□ -1.3
ATM-226ENST00000638443 MIFP14174 115 aa6.91□□□□□ -1.3
ATM-226ENST00000638443 MPV17L2Q567V2 206 aa6.91□□□□□ -1.3
ATM-226ENST00000638443 DAZ4Q86SG3 579 aaKnown RBP6.91□□□□□ -1.3
ATM-226ENST00000638443 DAZ3Q9NR90 486 aaKnown RBP6.91□□□□□ -1.3
ATM-226ENST00000638443 IGHV3-64A0A075B6Q5 118 aa6.91□□□□□ -1.3
ATM-226ENST00000638443 HTN3P15516 51 aa6.91□□□□□ -1.3
ATM-226ENST00000638443 DAD1P61803 113 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms