RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 TRBV7-3A0A075B6L6 115 aa13.32□□□□□ -0.28
CNOT9-209ENST00000627282 IGLL5B9A064 214 aa13.32□□□□□ -0.28
CNOT9-209ENST00000627282 RPL36AP83881 106 aaKnown RBP13.32□□□□□ -0.28
CNOT9-209ENST00000627282 COTL1Q14019 142 aa13.32□□□□□ -0.28
CNOT9-209ENST00000627282 ZNRF2Q8NHG8 242 aa13.32□□□□□ -0.28
CNOT9-209ENST00000627282 LINC00476Q8WZB0 136 aa13.32□□□□□ -0.28
CNOT9-209ENST00000627282 RPL36ALQ969Q0 106 aaKnown RBP13.32□□□□□ -0.28
CNOT9-209ENST00000627282 CHCHD7Q9BUK0 85 aa13.32□□□□□ -0.28
CNOT9-209ENST00000627282 NMUP48645 174 aa13.31□□□□□ -0.28
CNOT9-209ENST00000627282 TCTAP57738 103 aa13.31□□□□□ -0.28
CNOT9-209ENST00000627282 PAPPA-AS1Q5QFB9 102 aa13.31□□□□□ -0.28
CNOT9-209ENST00000627282 SLC25A29Q8N8R3 303 aa13.31□□□□□ -0.28
CNOT9-209ENST00000627282 IGKV2D-26A0A0A0MRZ7 120 aa13.31□□□□□ -0.28
CNOT9-209ENST00000627282 NPSP0C0P6 89 aa13.31□□□□□ -0.28
CNOT9-209ENST00000627282 C2orf91Q6ZV80 131 aa13.31□□□□□ -0.28
CNOT9-209ENST00000627282 IGLV4-69A0A075B6H9 119 aa13.3□□□□□ -0.28
CNOT9-209ENST00000627282 TRAV26-1A0A087WT03 109 aa13.3□□□□□ -0.28
CNOT9-209ENST00000627282 IGHV3-38A0A0C4DH36 116 aa13.3□□□□□ -0.28
CNOT9-209ENST00000627282 TRBV6-4A0A1B0GX49 114 aa13.3□□□□□ -0.28
CNOT9-209ENST00000627282 SIVA1O15304 175 aa13.3□□□□□ -0.28
CNOT9-209ENST00000627282 PCP2Q8IVA1 136 aa13.3□□□□□ -0.28
CNOT9-209ENST00000627282 IGLV4-3A0A075B6K6 122 aa13.29□□□□□ -0.28
CNOT9-209ENST00000627282 TRGV4A0A0C4DH28 118 aa13.29□□□□□ -0.28
CNOT9-209ENST00000627282 BATFQ16520 125 aa13.29□□□□□ -0.28
CNOT9-209ENST00000627282 VSIG2Q96IQ7 327 aa13.29□□□□□ -0.28
CNOT9-209ENST00000627282 DNAH1Q9P2D7 4330 aa13.28□□□□□ -0.28
CNOT9-209ENST00000627282 A0A0J9YY99 117 aa13.28□□□□□ -0.28
CNOT9-209ENST00000627282 CRYBA4P53673 196 aa13.28□□□□□ -0.28
CNOT9-209ENST00000627282 UBE2D3P61077 147 aa13.28□□□□□ -0.28
CNOT9-209ENST00000627282 UBE2D2P62837 147 aa13.28□□□□□ -0.28
CNOT9-209ENST00000627282 DAZ4Q86SG3 579 aaKnown RBP13.28□□□□□ -0.28
CNOT9-209ENST00000627282 OPRPNQ99935 248 aaPredicted RBP13.28□□□□□ -0.28
CNOT9-209ENST00000627282 DAZ3Q9NR90 486 aaKnown RBP13.28□□□□□ -0.28
CNOT9-209ENST00000627282 APLNQ9ULZ1 77 aa13.28□□□□□ -0.28
CNOT9-209ENST00000627282 ALMS1Q8TCU4 4167 aa13.28□□□□□ -0.28
CNOT9-209ENST00000627282 HINT1P49773 126 aaPredicted RBP13.28□□□□□ -0.28
CNOT9-209ENST00000627282 PRO0255Q9UI72 69 aa13.28□□□□□ -0.28
CNOT9-209ENST00000627282 C11orf86A6NJI1 115 aa13.27□□□□□ -0.29
CNOT9-209ENST00000627282 LY6G6CO95867 125 aa13.27□□□□□ -0.29
CNOT9-209ENST00000627282 VCX2Q9H322 139 aa13.27□□□□□ -0.29
CNOT9-209ENST00000627282 SPANXA1Q9NS26 97 aa13.27□□□□□ -0.29
CNOT9-209ENST00000627282 GAGE12JA6NER3 117 aa13.26□□□□□ -0.29
CNOT9-209ENST00000627282 GAGE1Q13065 139 aa13.26□□□□□ -0.29
CNOT9-209ENST00000627282 GAGE4Q13068 117 aa13.26□□□□□ -0.29
CNOT9-209ENST00000627282 GAGE5Q13069 117 aa13.26□□□□□ -0.29
CNOT9-209ENST00000627282 GAGE13Q4V321 117 aa13.26□□□□□ -0.29
CNOT9-209ENST00000627282 FAM104AQ969W3 186 aa13.26□□□□□ -0.29
CNOT9-209ENST00000627282 AMELXQ99217 191 aa13.26□□□□□ -0.29
CNOT9-209ENST00000627282 UBE2D4Q9Y2X8 147 aa13.26□□□□□ -0.29
CNOT9-209ENST00000627282 A0A1B0GV90 55 aa13.25□□□□□ -0.29
CNOT9-209ENST00000627282 PAX4O43316 350 aa13.25□□□□□ -0.29
CNOT9-209ENST00000627282 COL5A1-AS1Q5SY13 56 aa13.25□□□□□ -0.29
CNOT9-209ENST00000627282 NFE4Q86UQ8 179 aa13.25□□□□□ -0.29
CNOT9-209ENST00000627282 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.24□□□□□ -0.29
CNOT9-209ENST00000627282 IGKV2-29A2NJV5 120 aaPredicted RBP13.24□□□□□ -0.29
CNOT9-209ENST00000627282 E9PLD3 99 aa13.24□□□□□ -0.29
CNOT9-209ENST00000627282 MPV17L2Q567V2 206 aa13.24□□□□□ -0.29
CNOT9-209ENST00000627282 TMEM97Q5BJF2 176 aa13.24□□□□□ -0.29
CNOT9-209ENST00000627282 H3BNG1 76 aa13.24□□□□□ -0.29
CNOT9-209ENST00000627282 TIMM21Q9BVV7 248 aa13.24□□□□□ -0.29
CNOT9-209ENST00000627282 C15orf53Q8NAA6 179 aa13.23□□□□□ -0.29
CNOT9-209ENST00000627282 PRADC1Q9BSG0 188 aa13.23□□□□□ -0.29
CNOT9-209ENST00000627282 BVES-AS1Q5T3Y7 98 aa13.22□□□□□ -0.29
CNOT9-209ENST00000627282 NTM-AS1Q6ZSK4 140 aa13.22□□□□□ -0.29
CNOT9-209ENST00000627282 TTTY13Q9BZ97 58 aa13.22□□□□□ -0.29
CNOT9-209ENST00000627282 GTSF1LQ9H1H1 148 aa13.22□□□□□ -0.29
CNOT9-209ENST00000627282 HIGD1BQ9P298 99 aa13.22□□□□□ -0.29
CNOT9-209ENST00000627282 VPS13DQ5THJ4 4388 aa13.21□□□□□ -0.29
CNOT9-209ENST00000627282 LOC100131303A0A0U1RQF7 123 aa13.21□□□□□ -0.29
CNOT9-209ENST00000627282 HERVK_113P61574 105 aa13.21□□□□□ -0.29
CNOT9-209ENST00000627282 MAPKAPK5-AS1Q8N8E1 139 aa13.21□□□□□ -0.29
CNOT9-209ENST00000627282 A0A096LPF7 62 aa13.21□□□□□ -0.3
CNOT9-209ENST00000627282 TRAV8-6A0A0B4J262 113 aa13.21□□□□□ -0.3
CNOT9-209ENST00000627282 MRPS36P82909 103 aaKnown RBP13.21□□□□□ -0.3
CNOT9-209ENST00000627282 HYDINQ4G0P3 5121 aa13.2□□□□□ -0.3
CNOT9-209ENST00000627282 LINC00694P0DN24 101 aa13.2□□□□□ -0.3
CNOT9-209ENST00000627282 GYPEP15421 78 aa13.2□□□□□ -0.3
CNOT9-209ENST00000627282 HSD52Q0P140 79 aa13.19□□□□□ -0.3
CNOT9-209ENST00000627282 CHAC1Q9BUX1 264 aa13.19□□□□□ -0.3
CNOT9-209ENST00000627282 TRBV25-1A0A075B6N4 114 aa13.18□□□□□ -0.3
CNOT9-209ENST00000627282 A0A0J9YXV3 536 aa13.18□□□□□ -0.3
CNOT9-209ENST00000627282 TMEM170BQ5T4T1 132 aa13.18□□□□□ -0.3
CNOT9-209ENST00000627282 Q6ZUT4 128 aa13.18□□□□□ -0.3
CNOT9-209ENST00000627282 ICOSQ9Y6W8 199 aa13.18□□□□□ -0.3
CNOT9-209ENST00000627282 SMAGPQ0VAQ4 97 aa13.17□□□□□ -0.3
CNOT9-209ENST00000627282 CSDC2Q9Y534 153 aaKnown RBP13.17□□□□□ -0.3
CNOT9-209ENST00000627282 MYMXA0A1B0GTQ4 84 aa13.17□□□□□ -0.3
CNOT9-209ENST00000627282 ZNF22P17026 224 aaPredicted RBP13.17□□□□□ -0.3
CNOT9-209ENST00000627282 MRPL23Q16540 153 aaKnown RBP13.17□□□□□ -0.3
CNOT9-209ENST00000627282 DGAT2L7PQ6IED9 249 aa13.16□□□□□ -0.3
CNOT9-209ENST00000627282 TMEM223A0PJW6 202 aa13.15□□□□□ -0.3
CNOT9-209ENST00000627282 H7C423 109 aa13.15□□□□□ -0.3
CNOT9-209ENST00000627282 RNASE13Q5GAN3 156 aaKnown RBP13.15□□□□□ -0.3
CNOT9-209ENST00000627282 TMEM243Q9BU79 118 aa13.15□□□□□ -0.3
CNOT9-209ENST00000627282 TINCRA0A1B0GVN0 87 aa13.14□□□□□ -0.31
CNOT9-209ENST00000627282 ORAOV1Q8WV07 137 aa13.13□□□□□ -0.31
CNOT9-209ENST00000627282 UBE2D1P51668 147 aa13.13□□□□□ -0.31
CNOT9-209ENST00000627282 SEC11AP67812 179 aa13.13□□□□□ -0.31
CNOT9-209ENST00000627282 ESRGQ1W209 222 aa13.13□□□□□ -0.31
CNOT9-209ENST00000627282 KMT2AQ03164 3969 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 2271 ms