RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 ZFP2Q6ZN57 461 aa5.28□□□□□ -1.56
CTNNA1-244ENST00000627109 C11orf86A6NJI1 115 aa5.27□□□□□ -1.57
CTNNA1-244ENST00000627109 FOXI2Q6ZQN5 318 aa5.27□□□□□ -1.57
CTNNA1-244ENST00000627109 NOTCH1P46531 2555 aa5.27□□□□□ -1.57
CTNNA1-244ENST00000627109 IGHV1OR15-1A0A075B7D0 117 aa5.27□□□□□ -1.57
CTNNA1-244ENST00000627109 M0QY20 66 aa5.27□□□□□ -1.57
CTNNA1-244ENST00000627109 PRM2P04554 102 aa5.27□□□□□ -1.57
CTNNA1-244ENST00000627109 PMVKQ15126 192 aa5.27□□□□□ -1.57
CTNNA1-244ENST00000627109 TCTEX1D4Q5JR98 221 aa5.27□□□□□ -1.57
CTNNA1-244ENST00000627109 NFE4Q86UQ8 179 aa5.27□□□□□ -1.57
CTNNA1-244ENST00000627109 C3orf56Q8N813 242 aa5.27□□□□□ -1.57
CTNNA1-244ENST00000627109 DLX4Q92988 240 aaPredicted RBP5.27□□□□□ -1.57
CTNNA1-244ENST00000627109 FAM240AA0A1B0GVK7 77 aa5.27□□□□□ -1.57
CTNNA1-244ENST00000627109 AZU1P20160 251 aa5.27□□□□□ -1.57
CTNNA1-244ENST00000627109 HOXD3P31249 432 aaPredicted RBP5.27□□□□□ -1.57
CTNNA1-244ENST00000627109 RHOHQ15669 191 aa5.27□□□□□ -1.57
CTNNA1-244ENST00000627109 PAPPA-AS1Q5QFB9 102 aa5.27□□□□□ -1.57
CTNNA1-244ENST00000627109 AMELXQ99217 191 aa5.27□□□□□ -1.57
CTNNA1-244ENST00000627109 PLEKHB2Q96CS7 222 aa5.26□□□□□ -1.57
CTNNA1-244ENST00000627109 LINC01587Q99440 93 aa5.26□□□□□ -1.57
CTNNA1-244ENST00000627109 SPANXB1Q9NS25 103 aaPredicted RBP5.26□□□□□ -1.57
CTNNA1-244ENST00000627109 ADARB2-AS1A8MUL3 147 aa5.26□□□□□ -1.57
CTNNA1-244ENST00000627109 SLURP1P55000 103 aa5.26□□□□□ -1.57
CTNNA1-244ENST00000627109 CD28P10747 220 aa5.26□□□□□ -1.57
CTNNA1-244ENST00000627109 NPC2P61916 151 aa5.26□□□□□ -1.57
CTNNA1-244ENST00000627109 PRYO14603 147 aa5.25□□□□□ -1.57
CTNNA1-244ENST00000627109 UBE2D1P51668 147 aa5.25□□□□□ -1.57
CTNNA1-244ENST00000627109 C11orf45Q8TAV5 145 aa5.25□□□□□ -1.57
CTNNA1-244ENST00000627109 FAM104AQ969W3 186 aa5.25□□□□□ -1.57
CTNNA1-244ENST00000627109 IGHV3-38A0A0C4DH36 116 aa5.25□□□□□ -1.57
CTNNA1-244ENST00000627109 P0DMU3 169 aa5.25□□□□□ -1.57
CTNNA1-244ENST00000627109 FAM231AP0DMU4 169 aa5.25□□□□□ -1.57
CTNNA1-244ENST00000627109 FAM231CP0DMU5 169 aa5.25□□□□□ -1.57
CTNNA1-244ENST00000627109 RRN3P1Q2M238 152 aa5.25□□□□□ -1.57
CTNNA1-244ENST00000627109 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.25□□□□□ -1.57
CTNNA1-244ENST00000627109 HILS1P60008 231 aa5.25□□□□□ -1.57
CTNNA1-244ENST00000627109 RBMY1FQ15415 496 aaKnown RBP5.24□□□□□ -1.57
CTNNA1-244ENST00000627109 PYGO1Q9Y3Y4 419 aa5.24□□□□□ -1.57
CTNNA1-244ENST00000627109 TRGV11A0A075B6L2 103 aa5.24□□□□□ -1.57
CTNNA1-244ENST00000627109 CEMP1Q6PRD7 247 aaPredicted RBP5.24□□□□□ -1.57
CTNNA1-244ENST00000627109 TRPT1Q86TN4 253 aaKnown RBP5.24□□□□□ -1.57
CTNNA1-244ENST00000627109 A0A0J9YXV3 536 aa5.24□□□□□ -1.57
CTNNA1-244ENST00000627109 J3QQQ9 107 aa5.24□□□□□ -1.57
CTNNA1-244ENST00000627109 C18orf65Q6ZTR6 163 aa5.24□□□□□ -1.57
CTNNA1-244ENST00000627109 TMEM86BQ8N661 226 aa5.24□□□□□ -1.57
CTNNA1-244ENST00000627109 PRO0461Q9UI25 63 aa5.24□□□□□ -1.57
CTNNA1-244ENST00000627109 TRIAP1O43715 76 aa5.23□□□□□ -1.57
CTNNA1-244ENST00000627109 PROK1P58294 105 aa5.23□□□□□ -1.57
CTNNA1-244ENST00000627109 C4orf3Q8WVX3 66 aa5.23□□□□□ -1.57
CTNNA1-244ENST00000627109 XCL2Q9UBD3 114 aa5.23□□□□□ -1.57
CTNNA1-244ENST00000627109 IGHV3-53P01767 116 aa5.23□□□□□ -1.57
CTNNA1-244ENST00000627109 ZNRF2Q8NHG8 242 aa5.23□□□□□ -1.57
CTNNA1-244ENST00000627109 I3L3M4 83 aa5.23□□□□□ -1.57
CTNNA1-244ENST00000627109 CD164L2Q6UWJ8 174 aa5.23□□□□□ -1.57
CTNNA1-244ENST00000627109 HRCT1Q6UXD1 115 aa5.23□□□□□ -1.57
CTNNA1-244ENST00000627109 ANKRD29Q8N6D5 301 aa5.23□□□□□ -1.57
CTNNA1-244ENST00000627109 A0A0J9YY99 117 aa5.22□□□□□ -1.57
CTNNA1-244ENST00000627109 F8W1H4 67 aa5.22□□□□□ -1.57
CTNNA1-244ENST00000627109 PRIMA1Q86XR5 153 aa5.22□□□□□ -1.57
CTNNA1-244ENST00000627109 C20orf203Q8NBC4 194 aa5.22□□□□□ -1.57
CTNNA1-244ENST00000627109 X6R8D5 127 aa5.22□□□□□ -1.57
CTNNA1-244ENST00000627109 BEAN1Q3B7T3 259 aa5.22□□□□□ -1.57
CTNNA1-244ENST00000627109 Q6ZSV7 163 aa5.22□□□□□ -1.57
CTNNA1-244ENST00000627109 TMEM223A0PJW6 202 aa5.22□□□□□ -1.57
CTNNA1-244ENST00000627109 H3BMM0 161 aa5.22□□□□□ -1.57
CTNNA1-244ENST00000627109 C11orf72Q8NBR9 251 aa5.22□□□□□ -1.57
CTNNA1-244ENST00000627109 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.21□□□□□ -1.57
CTNNA1-244ENST00000627109 IGKV3OR2-268A0A0C4DH90 116 aa5.21□□□□□ -1.57
CTNNA1-244ENST00000627109 IGKV2-29A2NJV5 120 aaPredicted RBP5.21□□□□□ -1.57
CTNNA1-244ENST00000627109 TSPEAR-AS2P59090 65 aa5.21□□□□□ -1.57
CTNNA1-244ENST00000627109 UBE2D3P61077 147 aa5.21□□□□□ -1.57
CTNNA1-244ENST00000627109 UBE2D2P62837 147 aa5.21□□□□□ -1.57
CTNNA1-244ENST00000627109 TMEM61Q8N0U2 210 aa5.21□□□□□ -1.57
CTNNA1-244ENST00000627109 SLC25A29Q8N8R3 303 aa5.21□□□□□ -1.57
CTNNA1-244ENST00000627109 LINC01600Q96MT4 127 aa5.21□□□□□ -1.57
CTNNA1-244ENST00000627109 CUBNO60494 3623 aa5.21□□□□□ -1.58
CTNNA1-244ENST00000627109 REG3AQ06141 175 aa5.21□□□□□ -1.58
CTNNA1-244ENST00000627109 KRTAP24-1Q3LI83 254 aa5.21□□□□□ -1.58
CTNNA1-244ENST00000627109 IGHV3-30P01768 117 aa5.21□□□□□ -1.58
CTNNA1-244ENST00000627109 IGHV3-30-5P0DP03 117 aa5.21□□□□□ -1.58
CTNNA1-244ENST00000627109 LINC01006Q8NI28 216 aa5.21□□□□□ -1.58
CTNNA1-244ENST00000627109 TIMM21Q9BVV7 248 aa5.21□□□□□ -1.58
CTNNA1-244ENST00000627109 TENM1Q9UKZ4 2725 aa5.2□□□□□ -1.58
CTNNA1-244ENST00000627109 TRGV1A0A0A0MS02 117 aa5.2□□□□□ -1.58
CTNNA1-244ENST00000627109 RNASE1P07998 156 aaKnown RBP5.2□□□□□ -1.58
CTNNA1-244ENST00000627109 ZNF625Q96I27 306 aaPredicted RBP5.2□□□□□ -1.58
CTNNA1-244ENST00000627109 TRAV8-3A0A0A6YYJ7 113 aa5.2□□□□□ -1.58
CTNNA1-244ENST00000627109 GAGE12HA6NDE8 117 aa5.2□□□□□ -1.58
CTNNA1-244ENST00000627109 LEPROTO15243 131 aa5.2□□□□□ -1.58
CTNNA1-244ENST00000627109 INAFM2P0DMQ5 153 aa5.2□□□□□ -1.58
CTNNA1-244ENST00000627109 INSL3P51460 131 aa5.2□□□□□ -1.58
CTNNA1-244ENST00000627109 APOC4P55056 127 aa5.2□□□□□ -1.58
CTNNA1-244ENST00000627109 MRPS36P82909 103 aaKnown RBP5.2□□□□□ -1.58
CTNNA1-244ENST00000627109 FAM19A3Q7Z5A8 133 aa5.2□□□□□ -1.58
CTNNA1-244ENST00000627109 ERG28Q9UKR5 140 aa5.2□□□□□ -1.58
CTNNA1-244ENST00000627109 IGLV4-3A0A075B6K6 122 aa5.2□□□□□ -1.58
CTNNA1-244ENST00000627109 SBSPONQ8IVN8 264 aa5.2□□□□□ -1.58
CTNNA1-244ENST00000627109 SPINK8P0C7L1 97 aa5.19□□□□□ -1.58
CTNNA1-244ENST00000627109 PRO1854Q9UHT4 67 aa5.19□□□□□ -1.58
CTNNA1-244ENST00000627109 A8MWV9 139 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms