RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 USP17L23D6RBM5 183 aa4.19□□□□□ -1.74
TCF4-249ENST00000625716 SMR3BP02814 79 aaPredicted RBP4.19□□□□□ -1.74
TCF4-249ENST00000625716 S100A8P05109 93 aa4.19□□□□□ -1.74
TCF4-249ENST00000625716 RAB4AP20338 218 aa4.19□□□□□ -1.74
TCF4-249ENST00000625716 CAMPP49913 170 aa4.19□□□□□ -1.74
TCF4-249ENST00000625716 IFITM2Q01629 132 aa4.19□□□□□ -1.74
TCF4-249ENST00000625716 UQCC3Q6UW78 93 aa4.19□□□□□ -1.74
TCF4-249ENST00000625716 KIAA1109Q2LD37 5005 aa4.19□□□□□ -1.74
TCF4-249ENST00000625716 DYNC1H1Q14204 4646 aaKnown RBP4.18□□□□□ -1.74
TCF4-249ENST00000625716 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.18□□□□□ -1.74
TCF4-249ENST00000625716 IGKV2-29A2NJV5 120 aaPredicted RBP4.18□□□□□ -1.74
TCF4-249ENST00000625716 C9JQL5 133 aa4.18□□□□□ -1.74
TCF4-249ENST00000625716 VCYO14598 125 aa4.18□□□□□ -1.74
TCF4-249ENST00000625716 FGF6P10767 208 aa4.18□□□□□ -1.74
TCF4-249ENST00000625716 FCER1GP30273 86 aa4.18□□□□□ -1.74
TCF4-249ENST00000625716 HAMPP81172 84 aa4.18□□□□□ -1.74
TCF4-249ENST00000625716 SMAGPQ0VAQ4 97 aa4.18□□□□□ -1.74
TCF4-249ENST00000625716 Q5VSD8 79 aa4.18□□□□□ -1.74
TCF4-249ENST00000625716 DGAT2L7PQ6IED9 249 aa4.18□□□□□ -1.74
TCF4-249ENST00000625716 CFAP161Q6P656 301 aa4.18□□□□□ -1.74
TCF4-249ENST00000625716 AMN1Q8IY45 258 aa4.18□□□□□ -1.74
TCF4-249ENST00000625716 C20orf203Q8NBC4 194 aa4.18□□□□□ -1.74
TCF4-249ENST00000625716 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.17□□□□□ -1.74
TCF4-249ENST00000625716 SMIM27A0A1W2PRY6 76 aa4.17□□□□□ -1.74
TCF4-249ENST00000625716 hDV102S1A0JD36 115 aa4.17□□□□□ -1.74
TCF4-249ENST00000625716 LINC00862A6NCI5 91 aa4.17□□□□□ -1.74
TCF4-249ENST00000625716 F8W036 122 aa4.17□□□□□ -1.74
TCF4-249ENST00000625716 PPP1R2P9O14990 202 aa4.17□□□□□ -1.74
TCF4-249ENST00000625716 PRSS1P07477 247 aa4.17□□□□□ -1.74
TCF4-249ENST00000625716 INAFM2P0DMQ5 153 aa4.17□□□□□ -1.74
TCF4-249ENST00000625716 ZNF25P17030 456 aaPredicted RBP4.17□□□□□ -1.74
TCF4-249ENST00000625716 LINC01620Q4KN68 170 aa4.17□□□□□ -1.74
TCF4-249ENST00000625716 FAM104BQ5XKR9 115 aa4.17□□□□□ -1.74
TCF4-249ENST00000625716 OR5A1Q8NGJ0 315 aa4.17□□□□□ -1.74
TCF4-249ENST00000625716 RNF185Q96GF1 192 aa4.17□□□□□ -1.74
TCF4-249ENST00000625716 KIR2DL4Q99706 377 aa4.17□□□□□ -1.74
TCF4-249ENST00000625716 TMEM242Q9NWH2 141 aa4.17□□□□□ -1.74
TCF4-249ENST00000625716 TRBV27A0A0K0K1C4 114 aa4.16□□□□□ -1.74
TCF4-249ENST00000625716 C7orf77A4D0Y5 90 aa4.16□□□□□ -1.74
TCF4-249ENST00000625716 SMKR1H3BMG3 65 aa4.16□□□□□ -1.74
TCF4-249ENST00000625716 TCAPO15273 167 aa4.16□□□□□ -1.74
TCF4-249ENST00000625716 GAS8-AS1O95177 125 aa4.16□□□□□ -1.74
TCF4-249ENST00000625716 TSHBP01222 138 aa4.16□□□□□ -1.74
TCF4-249ENST00000625716 MT-ND4LP03901 98 aa4.16□□□□□ -1.74
TCF4-249ENST00000625716 CKS2P33552 79 aa4.16□□□□□ -1.74
TCF4-249ENST00000625716 RPS10P46783 165 aaKnown RBP4.16□□□□□ -1.74
TCF4-249ENST00000625716 POLR2KP53803 58 aaKnown RBP4.16□□□□□ -1.74
TCF4-249ENST00000625716 SUMO2P61956 95 aaKnown RBP4.16□□□□□ -1.74
TCF4-249ENST00000625716 HBBP68871 147 aa4.16□□□□□ -1.74
TCF4-249ENST00000625716 PNRC1Q12796 327 aaPredicted RBP4.16□□□□□ -1.74
TCF4-249ENST00000625716 MRPL51Q4U2R6 128 aaKnown RBP4.16□□□□□ -1.74
TCF4-249ENST00000625716 MRPL54Q6P161 138 aaKnown RBP4.16□□□□□ -1.74
TCF4-249ENST00000625716 CHCHD10Q8WYQ3 142 aaPredicted RBP4.16□□□□□ -1.74
TCF4-249ENST00000625716 TMEM18Q96B42 140 aa4.16□□□□□ -1.74
TCF4-249ENST00000625716 DPH3Q96FX2 82 aa4.16□□□□□ -1.74
TCF4-249ENST00000625716 ESDP10768 282 aa4.15□□□□□ -1.75
TCF4-249ENST00000625716 SS18Q15532 418 aa4.15□□□□□ -1.75
TCF4-249ENST00000625716 KRTAP26-1Q6PEX3 210 aa4.15□□□□□ -1.75
TCF4-249ENST00000625716 Q6ZSA8 131 aa4.15□□□□□ -1.75
TCF4-249ENST00000625716 C20orf78Q9BR46 151 aa4.15□□□□□ -1.75
TCF4-249ENST00000625716 CHAC1Q9BUX1 264 aa4.15□□□□□ -1.75
TCF4-249ENST00000625716 IGHV3-64A0A075B6Q5 118 aa4.14□□□□□ -1.75
TCF4-249ENST00000625716 TNFRSF6BO95407 300 aa4.14□□□□□ -1.75
TCF4-249ENST00000625716 PPBPP02775 128 aa4.14□□□□□ -1.75
TCF4-249ENST00000625716 XCL1P47992 114 aa4.14□□□□□ -1.75
TCF4-249ENST00000625716 NDUFA5Q16718 116 aa4.14□□□□□ -1.75
TCF4-249ENST00000625716 SCXQ7RTU7 201 aa4.14□□□□□ -1.75
TCF4-249ENST00000625716 ATP5L2Q7Z4Y8 100 aa4.14□□□□□ -1.75
TCF4-249ENST00000625716 MRPL52Q86TS9 123 aaKnown RBP4.14□□□□□ -1.75
TCF4-249ENST00000625716 ZNF664Q8N3J9 261 aa4.14□□□□□ -1.75
TCF4-249ENST00000625716 NRACQ8N912 160 aa4.14□□□□□ -1.75
TCF4-249ENST00000625716 C9orf163Q8N9P6 203 aa4.14□□□□□ -1.75
TCF4-249ENST00000625716 RYR1P21817 5038 aa4.14□□□□□ -1.75
TCF4-249ENST00000625716 LRP1BQ9NZR2 4599 aa4.13□□□□□ -1.75
TCF4-249ENST00000625716 TRBV24-1A0A075B6N3 115 aa4.13□□□□□ -1.75
TCF4-249ENST00000625716 LINC00959A0A1B0GUT2 108 aa4.13□□□□□ -1.75
TCF4-249ENST00000625716 TMEM218A2RU14 115 aa4.13□□□□□ -1.75
TCF4-249ENST00000625716 D6R8Y8 96 aa4.13□□□□□ -1.75
TCF4-249ENST00000625716 CCL25O15444 150 aa4.13□□□□□ -1.75
TCF4-249ENST00000625716 RAB5AP20339 215 aa4.13□□□□□ -1.75
TCF4-249ENST00000625716 MALP21145 153 aa4.13□□□□□ -1.75
TCF4-249ENST00000625716 CNBPP62633 177 aaKnown RBP4.13□□□□□ -1.75
TCF4-249ENST00000625716 TMEM136Q6ZRR5 245 aa4.13□□□□□ -1.75
TCF4-249ENST00000625716 COMMD7Q86VX2 200 aa4.13□□□□□ -1.75
TCF4-249ENST00000625716 ORMDL3Q8N138 153 aa4.13□□□□□ -1.75
TCF4-249ENST00000625716 Q8N9P0 234 aaPredicted RBP4.13□□□□□ -1.75
TCF4-249ENST00000625716 CIRBP-AS1Q8TBR5 109 aa4.13□□□□□ -1.75
TCF4-249ENST00000625716 SEC11CQ9BY50 192 aa4.13□□□□□ -1.75
TCF4-249ENST00000625716 CDC42SE2Q9NRR3 84 aa4.13□□□□□ -1.75
TCF4-249ENST00000625716 HSPG2P98160 4391 aa4.13□□□□□ -1.75
TCF4-249ENST00000625716 PCLOQ9Y6V0 5065 aa4.12□□□□□ -1.75
TCF4-249ENST00000625716 A0A1B0GXF2 115 aa4.12□□□□□ -1.75
TCF4-249ENST00000625716 C1orf196B1AJZ1 125 aa4.12□□□□□ -1.75
TCF4-249ENST00000625716 PHOX2AO14813 284 aa4.12□□□□□ -1.75
TCF4-249ENST00000625716 RPL32P62910 135 aaKnown RBP4.12□□□□□ -1.75
TCF4-249ENST00000625716 HIGD2BQ4VC39 106 aa4.12□□□□□ -1.75
TCF4-249ENST00000625716 CD164L2Q6UWJ8 174 aa4.12□□□□□ -1.75
TCF4-249ENST00000625716 PRELID3AQ96N28 172 aa4.12□□□□□ -1.75
TCF4-249ENST00000625716 SMIM2Q9BVW6 85 aa4.12□□□□□ -1.75
TCF4-249ENST00000625716 PKIGQ9Y2B9 76 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms