RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 SPINK13Q1W4C9 94 aa6.42□□□□□ -1.38
VCL-207ENST00000624354 LRRC75A-AS1Q8N1F1 130 aa6.42□□□□□ -1.38
VCL-207ENST00000624354 C10orf105Q8TEF2 133 aa6.42□□□□□ -1.38
VCL-207ENST00000624354 COX6CP09669 75 aa6.42□□□□□ -1.38
VCL-207ENST00000624354 A0A0J9YXV3 536 aa6.41□□□□□ -1.38
VCL-207ENST00000624354 UQCRQO14949 82 aa6.41□□□□□ -1.38
VCL-207ENST00000624354 IMUPQ9GZP8 106 aa6.41□□□□□ -1.38
VCL-207ENST00000624354 IGLV4-3A0A075B6K6 122 aa6.41□□□□□ -1.38
VCL-207ENST00000624354 MSMBP08118 114 aa6.41□□□□□ -1.38
VCL-207ENST00000624354 FAM19A5Q7Z5A7 132 aaPredicted RBP6.41□□□□□ -1.38
VCL-207ENST00000624354 CCL19Q99731 98 aa6.41□□□□□ -1.38
VCL-207ENST00000624354 SPANXDQ9BXN6 97 aa6.41□□□□□ -1.38
VCL-207ENST00000624354 K7EQG2 157 aa6.4□□□□□ -1.38
VCL-207ENST00000624354 PSMB8P28062 276 aa6.4□□□□□ -1.38
VCL-207ENST00000624354 CEMP1Q6PRD7 247 aaPredicted RBP6.4□□□□□ -1.38
VCL-207ENST00000624354 DEFB121Q5J5C9 76 aa6.4□□□□□ -1.39
VCL-207ENST00000624354 LINC00526Q96FQ7 95 aa6.4□□□□□ -1.39
VCL-207ENST00000624354 ICOSQ9Y6W8 199 aa6.4□□□□□ -1.39
VCL-207ENST00000624354 CD28P10747 220 aa6.39□□□□□ -1.39
VCL-207ENST00000624354 OR13C6PQ8NH95 151 aa6.39□□□□□ -1.39
VCL-207ENST00000624354 ZNF580Q9UK33 172 aa6.39□□□□□ -1.39
VCL-207ENST00000624354 KLK5Q9Y337 293 aaPredicted RBP6.39□□□□□ -1.39
VCL-207ENST00000624354 IGHV4-30-2A0A087WSY4 118 aa6.39□□□□□ -1.39
VCL-207ENST00000624354 A0A0J9YXY3 114 aa6.39□□□□□ -1.39
VCL-207ENST00000624354 A0A1B0GX51 115 aa6.39□□□□□ -1.39
VCL-207ENST00000624354 TIMM21Q9BVV7 248 aa6.39□□□□□ -1.39
VCL-207ENST00000624354 ACYP1P07311 99 aa6.38□□□□□ -1.39
VCL-207ENST00000624354 IGHV3-30-3P0DP02 117 aa6.38□□□□□ -1.39
VCL-207ENST00000624354 F8P00451 2351 aa6.38□□□□□ -1.39
VCL-207ENST00000624354 PRSS2P07478 247 aa6.38□□□□□ -1.39
VCL-207ENST00000624354 SYNJ2BPP57105 145 aa6.38□□□□□ -1.39
VCL-207ENST00000624354 CLEC2BQ92478 149 aa6.38□□□□□ -1.39
VCL-207ENST00000624354 PYGO1Q9Y3Y4 419 aa6.38□□□□□ -1.39
VCL-207ENST00000624354 HTN1P15515 57 aa6.38□□□□□ -1.39
VCL-207ENST00000624354 C10orf99Q6UWK7 81 aa6.38□□□□□ -1.39
VCL-207ENST00000624354 OTOGQ6ZRI0 2925 aa6.38□□□□□ -1.39
VCL-207ENST00000624354 TRAV25A0A0B4J276 109 aa6.37□□□□□ -1.39
VCL-207ENST00000624354 AVPP01185 164 aa6.37□□□□□ -1.39
VCL-207ENST00000624354 GAGE2AQ6NT46 116 aa6.37□□□□□ -1.39
VCL-207ENST00000624354 EDA2RQ9HAV5 297 aa6.37□□□□□ -1.39
VCL-207ENST00000624354 MAST4O15021 2626 aa6.37□□□□□ -1.39
VCL-207ENST00000624354 TMEM89A2RUT3 159 aa6.37□□□□□ -1.39
VCL-207ENST00000624354 ADARB2-AS1A8MUL3 147 aa6.37□□□□□ -1.39
VCL-207ENST00000624354 B4DSR2 109 aa6.37□□□□□ -1.39
VCL-207ENST00000624354 IGHV4-59P01825 116 aa6.37□□□□□ -1.39
VCL-207ENST00000624354 ATP5G1P05496 136 aa6.37□□□□□ -1.39
VCL-207ENST00000624354 MRPS36P82909 103 aaKnown RBP6.37□□□□□ -1.39
VCL-207ENST00000624354 SPANXCQ9NY87 97 aa6.37□□□□□ -1.39
VCL-207ENST00000624354 ATRQ13535 2644 aa6.37□□□□□ -1.39
VCL-207ENST00000624354 IGHV3-73A0A0B4J1V6 119 aa6.37□□□□□ -1.39
VCL-207ENST00000624354 WIPF1O43516 503 aa6.37□□□□□ -1.39
VCL-207ENST00000624354 TRAV8-3A0A0A6YYJ7 113 aa6.36□□□□□ -1.39
VCL-207ENST00000624354 LST1O00453 97 aa6.36□□□□□ -1.39
VCL-207ENST00000624354 NPC2P61916 151 aa6.36□□□□□ -1.39
VCL-207ENST00000624354 LINC00643Q86TS7 51 aa6.36□□□□□ -1.39
VCL-207ENST00000624354 IGHV1-58A0A0C4DH39 117 aa6.36□□□□□ -1.39
VCL-207ENST00000624354 RPS28P62857 69 aaKnown RBP6.36□□□□□ -1.39
VCL-207ENST00000624354 RNF152Q8N8N0 203 aa6.36□□□□□ -1.39
VCL-207ENST00000624354 DUX5Q96PT3 197 aa6.36□□□□□ -1.39
VCL-207ENST00000624354 NDUFA12Q9UI09 145 aa6.36□□□□□ -1.39
VCL-207ENST00000624354 COX7CP15954 63 aa6.35□□□□□ -1.39
VCL-207ENST00000624354 DEFB112Q30KQ8 113 aa6.35□□□□□ -1.39
VCL-207ENST00000624354 LITAFQ99732 161 aa6.35□□□□□ -1.39
VCL-207ENST00000624354 PROK1P58294 105 aa6.35□□□□□ -1.39
VCL-207ENST00000624354 RNASE13Q5GAN3 156 aaKnown RBP6.35□□□□□ -1.39
VCL-207ENST00000624354 RBMY1A1P0DJD3 496 aaKnown RBP6.34□□□□□ -1.39
VCL-207ENST00000624354 RBMY1CP0DJD4 496 aa6.34□□□□□ -1.39
VCL-207ENST00000624354 HOXD3P31249 432 aaPredicted RBP6.34□□□□□ -1.39
VCL-207ENST00000624354 RBMY1FQ15415 496 aaKnown RBP6.34□□□□□ -1.39
VCL-207ENST00000624354 TINCRA0A1B0GVN0 87 aa6.34□□□□□ -1.39
VCL-207ENST00000624354 KNCNA6PVL3 124 aa6.34□□□□□ -1.39
VCL-207ENST00000624354 FAM104AQ969W3 186 aa6.34□□□□□ -1.39
VCL-207ENST00000624354 MIAQ16674 131 aa6.33□□□□□ -1.4
VCL-207ENST00000624354 VSIG2Q96IQ7 327 aa6.33□□□□□ -1.4
VCL-207ENST00000624354 CRYGAP11844 174 aa6.33□□□□□ -1.4
VCL-207ENST00000624354 DEFB131AP59861 70 aa6.33□□□□□ -1.4
VCL-207ENST00000624354 ADAMTSL4-AS1Q5T5F5 129 aa6.33□□□□□ -1.4
VCL-207ENST00000624354 HIST2H2BDQ6DRA6 164 aa6.33□□□□□ -1.4
VCL-207ENST00000624354 Q6ZSV7 163 aa6.33□□□□□ -1.4
VCL-207ENST00000624354 SMCR5Q8TEV8 140 aa6.33□□□□□ -1.4
VCL-207ENST00000624354 UBE2D4Q9Y2X8 147 aa6.33□□□□□ -1.4
VCL-207ENST00000624354 HIVEP1P15822 2718 aa6.32□□□□□ -1.4
VCL-207ENST00000624354 TRACP01848 142 aa6.32□□□□□ -1.4
VCL-207ENST00000624354 CXCL5P42830 114 aa6.32□□□□□ -1.4
VCL-207ENST00000624354 ZNF415Q09FC8 603 aa6.32□□□□□ -1.4
VCL-207ENST00000624354 UBE2E2Q96LR5 201 aa6.32□□□□□ -1.4
VCL-207ENST00000624354 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.32□□□□□ -1.4
VCL-207ENST00000624354 hADV29S1A0JD25 119 aa6.32□□□□□ -1.4
VCL-207ENST00000624354 IGKV2-29A2NJV5 120 aaPredicted RBP6.32□□□□□ -1.4
VCL-207ENST00000624354 CHCHD7Q9BUK0 85 aa6.32□□□□□ -1.4
VCL-207ENST00000624354 A0A0U1RRA0 63 aa6.32□□□□□ -1.4
VCL-207ENST00000624354 A8MZ25 164 aa6.32□□□□□ -1.4
VCL-207ENST00000624354 PIK3CD-AS1Q5SR53 167 aa6.32□□□□□ -1.4
VCL-207ENST00000624354 ATOX1O00244 68 aa6.31□□□□□ -1.4
VCL-207ENST00000624354 PRM2P04554 102 aa6.31□□□□□ -1.4
VCL-207ENST00000624354 C5orf38Q86SI9 138 aa6.31□□□□□ -1.4
VCL-207ENST00000624354 TMEM61Q8N0U2 210 aa6.31□□□□□ -1.4
VCL-207ENST00000624354 Q9UF83 564 aa6.31□□□□□ -1.4
VCL-207ENST00000624354 DSCR9P59020 149 aa6.3□□□□□ -1.4
VCL-207ENST00000624354 Q6ZSN1 163 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms