RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 ZNF415Q09FC8 603 aa13.34□□□□□ -0.27
PCDHB2-202ENST00000622947 SFTA2Q6UW10 78 aa13.34□□□□□ -0.27
PCDHB2-202ENST00000622947 M0QY20 66 aa13.33□□□□□ -0.27
PCDHB2-202ENST00000622947 M0R2P5 195 aa13.33□□□□□ -0.27
PCDHB2-202ENST00000622947 PPP1R17O96001 155 aa13.33□□□□□ -0.27
PCDHB2-202ENST00000622947 DEFB104AQ8WTQ1 72 aa13.33□□□□□ -0.27
PCDHB2-202ENST00000622947 ZNF56Q15929 161 aa13.33□□□□□ -0.28
PCDHB2-202ENST00000622947 IGHV3-73A0A0B4J1V6 119 aa13.32□□□□□ -0.28
PCDHB2-202ENST00000622947 M0QXV9 152 aa13.32□□□□□ -0.28
PCDHB2-202ENST00000622947 POLR2KP53803 58 aaKnown RBP13.32□□□□□ -0.28
PCDHB2-202ENST00000622947 KRTAP24-1Q3LI83 254 aa13.32□□□□□ -0.28
PCDHB2-202ENST00000622947 CSNK1G2-AS1Q8NCQ2 148 aa13.32□□□□□ -0.28
PCDHB2-202ENST00000622947 TRAV4A0A0B4J268 109 aa13.31□□□□□ -0.28
PCDHB2-202ENST00000622947 SCGB1C2P0DMR2 95 aa13.31□□□□□ -0.28
PCDHB2-202ENST00000622947 ORMDL2Q53FV1 153 aa13.31□□□□□ -0.28
PCDHB2-202ENST00000622947 IL17DQ8TAD2 202 aa13.31□□□□□ -0.28
PCDHB2-202ENST00000622947 SRSF9Q13242 221 aaKnown RBP eCLIP13.3□□□□□ -0.28
PCDHB2-202ENST00000622947 C9orf66Q5T8R8 295 aa13.3□□□□□ -0.28
PCDHB2-202ENST00000622947 Q9UF83 564 aa13.3□□□□□ -0.28
PCDHB2-202ENST00000622947 Q6ZSN1 163 aa13.29□□□□□ -0.28
PCDHB2-202ENST00000622947 CMYA5Q8N3K9 4069 aa13.29□□□□□ -0.28
PCDHB2-202ENST00000622947 ZNF815PA8K554 130 aa13.28□□□□□ -0.28
PCDHB2-202ENST00000622947 P0DMU3 169 aa13.28□□□□□ -0.28
PCDHB2-202ENST00000622947 FAM231AP0DMU4 169 aa13.28□□□□□ -0.28
PCDHB2-202ENST00000622947 FAM231CP0DMU5 169 aa13.28□□□□□ -0.28
PCDHB2-202ENST00000622947 TOMM6Q96B49 74 aa13.28□□□□□ -0.28
PCDHB2-202ENST00000622947 TRBV6-5A0A0K0K1A5 114 aa13.28□□□□□ -0.28
PCDHB2-202ENST00000622947 SDHAF1A6NFY7 115 aa13.28□□□□□ -0.28
PCDHB2-202ENST00000622947 PIK3CD-AS1Q5SR53 167 aa13.28□□□□□ -0.28
PCDHB2-202ENST00000622947 SCGB1D4Q6XE38 83 aa13.28□□□□□ -0.28
PCDHB2-202ENST00000622947 PRADC1Q9BSG0 188 aa13.28□□□□□ -0.28
PCDHB2-202ENST00000622947 SPXQ9BT56 116 aa13.28□□□□□ -0.28
PCDHB2-202ENST00000622947 STAB1Q9NY15 2570 aa13.28□□□□□ -0.28
PCDHB2-202ENST00000622947 NBEAL2Q6ZNJ1 2754 aa13.27□□□□□ -0.28
PCDHB2-202ENST00000622947 PLAC8L1A1L4L8 177 aa13.27□□□□□ -0.29
PCDHB2-202ENST00000622947 SLC25A20O43772 301 aa13.27□□□□□ -0.29
PCDHB2-202ENST00000622947 PLEKHB2Q96CS7 222 aa13.26□□□□□ -0.29
PCDHB2-202ENST00000622947 TRBV27A0A0K0K1C4 114 aa13.25□□□□□ -0.29
PCDHB2-202ENST00000622947 WFDC9Q8NEX5 89 aa13.25□□□□□ -0.29
PCDHB2-202ENST00000622947 TMEM263Q8WUH6 116 aaKnown RBP13.25□□□□□ -0.29
PCDHB2-202ENST00000622947 VCYO14598 125 aa13.24□□□□□ -0.29
PCDHB2-202ENST00000622947 MEIG1Q5JSS6 88 aa13.24□□□□□ -0.29
PCDHB2-202ENST00000622947 C2orf66Q6UXQ4 117 aa13.24□□□□□ -0.29
PCDHB2-202ENST00000622947 PRIMA1Q86XR5 153 aa13.24□□□□□ -0.29
PCDHB2-202ENST00000622947 SCGB3A1Q96QR1 104 aa13.24□□□□□ -0.29
PCDHB2-202ENST00000622947 Q6ZTI0 123 aa13.24□□□□□ -0.29
PCDHB2-202ENST00000622947 C10orf126Q8N4M7 172 aa13.24□□□□□ -0.29
PCDHB2-202ENST00000622947 NEXN-AS1Q8NBZ9 246 aa13.24□□□□□ -0.29
PCDHB2-202ENST00000622947 PKD1L1Q8TDX9 2849 aa13.24□□□□□ -0.29
PCDHB2-202ENST00000622947 RS1O15537 224 aa13.23□□□□□ -0.29
PCDHB2-202ENST00000622947 TMEM126AQ9H061 195 aa13.23□□□□□ -0.29
PCDHB2-202ENST00000622947 EDA2RQ9HAV5 297 aa13.23□□□□□ -0.29
PCDHB2-202ENST00000622947 TRGV1A0A0A0MS02 117 aa13.23□□□□□ -0.29
PCDHB2-202ENST00000622947 C9JAW5 83 aa13.22□□□□□ -0.29
PCDHB2-202ENST00000622947 CFC1BP0CG36 223 aa13.22□□□□□ -0.29
PCDHB2-202ENST00000622947 CFC1P0CG37 223 aa13.22□□□□□ -0.29
PCDHB2-202ENST00000622947 NOP10Q9NPE3 64 aaKnown RBP13.22□□□□□ -0.29
PCDHB2-202ENST00000622947 PRO1854Q9UHT4 67 aa13.21□□□□□ -0.29
PCDHB2-202ENST00000622947 RPL39P62891 51 aaKnown RBP13.2□□□□□ -0.3
PCDHB2-202ENST00000622947 TRAV8-4A0A0B4J246 113 aa13.2□□□□□ -0.3
PCDHB2-202ENST00000622947 TSHBP01222 138 aa13.2□□□□□ -0.3
PCDHB2-202ENST00000622947 C15orf53Q8NAA6 179 aa13.2□□□□□ -0.3
PCDHB2-202ENST00000622947 A0A0J9YY99 117 aa13.19□□□□□ -0.3
PCDHB2-202ENST00000622947 DAZ2Q13117 558 aaKnown RBP13.19□□□□□ -0.3
PCDHB2-202ENST00000622947 MAST4O15021 2626 aa13.19□□□□□ -0.3
PCDHB2-202ENST00000622947 IGHV3-53P01767 116 aa13.19□□□□□ -0.3
PCDHB2-202ENST00000622947 BAALCQ8WXS3 180 aa13.19□□□□□ -0.3
PCDHB2-202ENST00000622947 C16orf74Q96GX8 76 aa13.19□□□□□ -0.3
PCDHB2-202ENST00000622947 LINC01600Q96MT4 127 aa13.19□□□□□ -0.3
PCDHB2-202ENST00000622947 WIPF1O43516 503 aa13.18□□□□□ -0.3
PCDHB2-202ENST00000622947 IGHV3-30P01768 117 aa13.18□□□□□ -0.3
PCDHB2-202ENST00000622947 IGHV3-30-5P0DP03 117 aa13.18□□□□□ -0.3
PCDHB2-202ENST00000622947 MRPL23Q16540 153 aaKnown RBP13.18□□□□□ -0.3
PCDHB2-202ENST00000622947 NTN5Q8WTR8 489 aaPredicted RBP13.18□□□□□ -0.3
PCDHB2-202ENST00000622947 TP53TG1Q9Y2A0 90 aa13.18□□□□□ -0.3
PCDHB2-202ENST00000622947 ANK2Q01484 3957 aa13.18□□□□□ -0.3
PCDHB2-202ENST00000622947 RPL13AP40429 203 aaKnown RBP13.17□□□□□ -0.3
PCDHB2-202ENST00000622947 IGIPA6NJ69 53 aa13.17□□□□□ -0.3
PCDHB2-202ENST00000622947 I3L3M4 83 aa13.16□□□□□ -0.3
PCDHB2-202ENST00000622947 PPDPFQ9H3Y8 114 aa13.16□□□□□ -0.3
PCDHB2-202ENST00000622947 OVOL2Q9BRP0 275 aa13.15□□□□□ -0.3
PCDHB2-202ENST00000622947 COL6A5A8TX70 2615 aa13.15□□□□□ -0.3
PCDHB2-202ENST00000622947 X6R8D5 127 aa13.15□□□□□ -0.31
PCDHB2-202ENST00000622947 HERVK_113P61574 105 aa13.14□□□□□ -0.31
PCDHB2-202ENST00000622947 RHOHQ15669 191 aa13.14□□□□□ -0.31
PCDHB2-202ENST00000622947 OXLD1Q5BKU9 147 aa13.14□□□□□ -0.31
PCDHB2-202ENST00000622947 SLC25A29Q8N8R3 303 aa13.14□□□□□ -0.31
PCDHB2-202ENST00000622947 EMP1P54849 157 aa13.13□□□□□ -0.31
PCDHB2-202ENST00000622947 ATXN8Q156A1 80 aa13.12□□□□□ -0.31
PCDHB2-202ENST00000622947 C3orf56Q8N813 242 aa13.12□□□□□ -0.31
PCDHB2-202ENST00000622947 TMEM141Q96I45 108 aa13.12□□□□□ -0.31
PCDHB2-202ENST00000622947 TIMM17AQ99595 171 aa13.12□□□□□ -0.31
PCDHB2-202ENST00000622947 IGHV3-33P01772 117 aa13.12□□□□□ -0.31
PCDHB2-202ENST00000622947 LINC01620Q4KN68 170 aa13.12□□□□□ -0.31
PCDHB2-202ENST00000622947 C20orf203Q8NBC4 194 aa13.12□□□□□ -0.31
PCDHB2-202ENST00000622947 IGHV3-38A0A0C4DH36 116 aa13.11□□□□□ -0.31
PCDHB2-202ENST00000622947 PAPPA-AS1Q5QFB9 102 aa13.11□□□□□ -0.31
PCDHB2-202ENST00000622947 OPRPNQ99935 248 aaPredicted RBP13.11□□□□□ -0.31
PCDHB2-202ENST00000622947 TEX49A0A1B0GTD5 131 aa13.1□□□□□ -0.31
PCDHB2-202ENST00000622947 UBE2WQ96B02 151 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms